RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 CBX1P83916 185 aa18.39■□□□□ 0.53
TSPAN4-211ENST00000468468 STK38Q15208 465 aa18.39■□□□□ 0.53
TSPAN4-211ENST00000468468 SF3A1Q15459 793 aaKnown RBP18.39■□□□□ 0.53
TSPAN4-211ENST00000468468 CLIC4Q9Y696 253 aa18.39■□□□□ 0.53
TSPAN4-211ENST00000468468 MAP3K15Q6ZN16 1313 aa18.38■□□□□ 0.53
TSPAN4-211ENST00000468468 HSP90AB3PQ58FF7 597 aa18.38■□□□□ 0.53
TSPAN4-211ENST00000468468 FILIP1Q7Z7B0 1213 aa18.38■□□□□ 0.53
TSPAN4-211ENST00000468468 LINC00301Q8NCQ3 95 aa18.38■□□□□ 0.53
TSPAN4-211ENST00000468468 RAB11FIP4Q86YS3 637 aa18.38■□□□□ 0.53
TSPAN4-211ENST00000468468 NAT10Q9H0A0 1025 aaKnown RBP18.38■□□□□ 0.53
TSPAN4-211ENST00000468468 PAXBP1Q9Y5B6 917 aa18.38■□□□□ 0.53
TSPAN4-211ENST00000468468 A0A1W2PQ27 194 aa18.37■□□□□ 0.53
TSPAN4-211ENST00000468468 A0A1W2PQ64 194 aa18.37■□□□□ 0.53
TSPAN4-211ENST00000468468 A0A1W2PQD8 194 aa18.37■□□□□ 0.53
TSPAN4-211ENST00000468468 GOLGA8BA8MQT2 603 aa18.37■□□□□ 0.53
TSPAN4-211ENST00000468468 DHX16O60231 1041 aaKnown RBP18.37■□□□□ 0.53
TSPAN4-211ENST00000468468 NDUFA8P51970 172 aa18.37■□□□□ 0.53
TSPAN4-211ENST00000468468 SCARF1Q14162 830 aa18.37■□□□□ 0.53
TSPAN4-211ENST00000468468 GIGYF2Q6Y7W6 1299 aaKnown RBP18.37■□□□□ 0.53
TSPAN4-211ENST00000468468 ORC3Q9UBD5 711 aaPredicted RBP18.37■□□□□ 0.53
TSPAN4-211ENST00000468468 SKILP12757 684 aa18.37■□□□□ 0.53
TSPAN4-211ENST00000468468 ZAP70P43403 619 aa18.37■□□□□ 0.53
TSPAN4-211ENST00000468468 PIP4K2BP78356 416 aa18.37■□□□□ 0.53
TSPAN4-211ENST00000468468 TRIM28Q13263 835 aaKnown RBP18.37■□□□□ 0.53
TSPAN4-211ENST00000468468 ATP2B3Q16720 1220 aa18.37■□□□□ 0.53
TSPAN4-211ENST00000468468 ACSBG1Q96GR2 724 aa18.37■□□□□ 0.53
TSPAN4-211ENST00000468468 PUS7LQ9H0K6 701 aaKnown RBP18.37■□□□□ 0.53
TSPAN4-211ENST00000468468 PLCH1Q4KWH8 1693 aa18.37■□□□□ 0.53
TSPAN4-211ENST00000468468 SPATA31A1Q5TZJ5 1347 aa18.37■□□□□ 0.53
TSPAN4-211ENST00000468468 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.37■□□□□ 0.53
TSPAN4-211ENST00000468468 RBM6P78332 1123 aaKnown RBP18.36■□□□□ 0.53
TSPAN4-211ENST00000468468 TAF7LQ5H9L4 462 aa18.36■□□□□ 0.53
TSPAN4-211ENST00000468468 MB21D2Q8IYB1 491 aaPredicted RBP18.36■□□□□ 0.53
TSPAN4-211ENST00000468468 HPS5Q9UPZ3 1129 aa18.36■□□□□ 0.53
TSPAN4-211ENST00000468468 CCDC69A6NI79 296 aa18.36■□□□□ 0.53
TSPAN4-211ENST00000468468 PCCAP05165 728 aaPredicted RBP18.36■□□□□ 0.53
TSPAN4-211ENST00000468468 CCDC112Q8NEF3 446 aa18.36■□□□□ 0.53
TSPAN4-211ENST00000468468 FBXO18Q8NFZ0 1043 aa18.36■□□□□ 0.53
TSPAN4-211ENST00000468468 NCOA7Q8NI08 942 aa18.36■□□□□ 0.53
TSPAN4-211ENST00000468468 ZNF592Q92610 1267 aa18.36■□□□□ 0.53
TSPAN4-211ENST00000468468 APPBP2Q92624 585 aa18.36■□□□□ 0.53
TSPAN4-211ENST00000468468 CPLX1O14810 134 aa18.36■□□□□ 0.53
TSPAN4-211ENST00000468468 DDB1Q16531 1140 aa18.36■□□□□ 0.53
TSPAN4-211ENST00000468468 CEP135Q66GS9 1140 aa18.36■□□□□ 0.53
TSPAN4-211ENST00000468468 RALYLQ86SE5 291 aaKnown RBP18.36■□□□□ 0.53
TSPAN4-211ENST00000468468 KCNG4Q8TDN1 519 aa18.36■□□□□ 0.53
TSPAN4-211ENST00000468468 GJB4Q9NTQ9 266 aa18.36■□□□□ 0.53
TSPAN4-211ENST00000468468 NWD2Q9ULI1 1742 aa18.35■□□□□ 0.53
TSPAN4-211ENST00000468468 USP27XA6NNY8 438 aa18.35■□□□□ 0.53
TSPAN4-211ENST00000468468 SPTLC2O15270 562 aa18.35■□□□□ 0.53
TSPAN4-211ENST00000468468 ANTXR2P58335 489 aa18.35■□□□□ 0.53
TSPAN4-211ENST00000468468 NCBP1Q09161 790 aaKnown RBP18.35■□□□□ 0.53
TSPAN4-211ENST00000468468 ZRSR1Q15695 479 aaKnown RBP18.35■□□□□ 0.53
TSPAN4-211ENST00000468468 ZBTB38Q8NAP3 1195 aaPredicted RBP18.35■□□□□ 0.53
TSPAN4-211ENST00000468468 POLR3EQ9NVU0 708 aa18.35■□□□□ 0.53
TSPAN4-211ENST00000468468 KIAA1468Q9P260 1216 aa18.35■□□□□ 0.53
TSPAN4-211ENST00000468468 FBXO3Q9UK99 471 aa18.35■□□□□ 0.53
TSPAN4-211ENST00000468468 TBC1D2BQ9UPU7 963 aa18.35■□□□□ 0.53
TSPAN4-211ENST00000468468 ZNF213O14771 459 aa18.35■□□□□ 0.53
TSPAN4-211ENST00000468468 YEATS4O95619 227 aa18.35■□□□□ 0.53
TSPAN4-211ENST00000468468 MYSM1Q5VVJ2 828 aa18.35■□□□□ 0.53
TSPAN4-211ENST00000468468 PI16Q6UXB8 463 aa18.35■□□□□ 0.53
TSPAN4-211ENST00000468468 PHLPP1O60346 1717 aa18.34■□□□□ 0.53
TSPAN4-211ENST00000468468 NLRP10Q86W26 655 aa18.34■□□□□ 0.53
TSPAN4-211ENST00000468468 LRP6O75581 1613 aa18.34■□□□□ 0.53
TSPAN4-211ENST00000468468 VGLL3A8MV65 326 aa18.34■□□□□ 0.53
TSPAN4-211ENST00000468468 CCZ1BP86790 482 aa18.34■□□□□ 0.53
TSPAN4-211ENST00000468468 CCZ1P86791 482 aaPredicted RBP18.34■□□□□ 0.53
TSPAN4-211ENST00000468468 SYNE3Q6ZMZ3 975 aa18.34■□□□□ 0.53
TSPAN4-211ENST00000468468 BRAPQ7Z569 592 aa18.34■□□□□ 0.53
TSPAN4-211ENST00000468468 GPAA1O43292 621 aa18.33■□□□□ 0.53
TSPAN4-211ENST00000468468 SYCP1Q15431 976 aa18.33■□□□□ 0.53
TSPAN4-211ENST00000468468 DOT1LQ8TEK3 1739 aa18.33■□□□□ 0.53
TSPAN4-211ENST00000468468 IFIT5Q13325 482 aaKnown RBP18.33■□□□□ 0.52
TSPAN4-211ENST00000468468 PTPN14Q15678 1187 aa18.33■□□□□ 0.52
TSPAN4-211ENST00000468468 DPCR1Q3MIW9 517 aa18.33■□□□□ 0.52
TSPAN4-211ENST00000468468 MARCH10Q8NA82 808 aaPredicted RBP18.33■□□□□ 0.52
TSPAN4-211ENST00000468468 WNK3Q9BYP7 1800 aa18.33■□□□□ 0.52
TSPAN4-211ENST00000468468 SPDYE4A6NLX3 237 aa18.32■□□□□ 0.52
TSPAN4-211ENST00000468468 KIF28PB7ZC32 967 aa18.32■□□□□ 0.52
TSPAN4-211ENST00000468468 U2AF2P26368 475 aaKnown RBP eCLIP18.32■□□□□ 0.52
TSPAN4-211ENST00000468468 TRMT1Q9NXH9 659 aaKnown RBP18.32■□□□□ 0.52
TSPAN4-211ENST00000468468 IGSF3O75054 1194 aa18.31■□□□□ 0.52
TSPAN4-211ENST00000468468 ZNF202O95125 648 aa18.31■□□□□ 0.52
TSPAN4-211ENST00000468468 SLC3A2P08195 630 aaKnown RBP18.31■□□□□ 0.52
TSPAN4-211ENST00000468468 ANO1Q5XXA6 986 aa18.31■□□□□ 0.52
TSPAN4-211ENST00000468468 NBPF11Q86T75 865 aa18.31■□□□□ 0.52
TSPAN4-211ENST00000468468 DZIP3Q86Y13 1208 aaKnown RBP18.31■□□□□ 0.52
TSPAN4-211ENST00000468468 BIN1O00499 593 aa18.31■□□□□ 0.52
TSPAN4-211ENST00000468468 CSF1RP07333 972 aa18.31■□□□□ 0.52
TSPAN4-211ENST00000468468 GSDMDP57764 484 aa18.31■□□□□ 0.52
TSPAN4-211ENST00000468468 KIF23Q02241 960 aaPredicted RBP18.31■□□□□ 0.52
TSPAN4-211ENST00000468468 NAA30Q147X3 362 aaPredicted RBP18.31■□□□□ 0.52
TSPAN4-211ENST00000468468 PLA2G12BQ9BX93 195 aa18.31■□□□□ 0.52
TSPAN4-211ENST00000468468 METTL24Q5JXM2 366 aa18.3■□□□□ 0.52
TSPAN4-211ENST00000468468 NYAP1Q6ZVC0 841 aa18.3■□□□□ 0.52
TSPAN4-211ENST00000468468 BPIFA3Q9BQP9 254 aa18.3■□□□□ 0.52
TSPAN4-211ENST00000468468 CDCA7Q9BWT1 371 aaPredicted RBP18.3■□□□□ 0.52
TSPAN4-211ENST00000468468 TMEM51Q9NW97 253 aa18.3■□□□□ 0.52
TSPAN4-211ENST00000468468 NRAPQ86VF7 1730 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms