RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 CTNNA3Q9UI47 895 aa24.53■■□□□ 1.52
TMEM53-207ENST00000468117 C10orf71Q711Q0 1435 aa24.53■■□□□ 1.52
TMEM53-207ENST00000468117 MAST2Q6P0Q8 1798 aa24.53■■□□□ 1.52
TMEM53-207ENST00000468117 APPP05067 770 aa24.52■■□□□ 1.52
TMEM53-207ENST00000468117 DPP8Q6V1X1 898 aaPredicted RBP24.52■■□□□ 1.52
TMEM53-207ENST00000468117 STOX1Q6ZVD7 989 aa24.52■■□□□ 1.52
TMEM53-207ENST00000468117 LCORLQ8N3X6 602 aa24.52■■□□□ 1.52
TMEM53-207ENST00000468117 MECOMQ03112 1051 aa24.52■■□□□ 1.52
TMEM53-207ENST00000468117 NAA16Q6N069 864 aaPredicted RBP24.52■■□□□ 1.52
TMEM53-207ENST00000468117 NSUN4Q96CB9 384 aaKnown RBP24.52■■□□□ 1.52
TMEM53-207ENST00000468117 NEK1Q96PY6 1258 aa24.52■■□□□ 1.52
TMEM53-207ENST00000468117 LARP6Q9BRS8 491 aaKnown RBP24.52■■□□□ 1.52
TMEM53-207ENST00000468117 DLEC1Q9Y238 1755 aa24.51■■□□□ 1.51
TMEM53-207ENST00000468117 RIMBP2O15034 1052 aa24.51■■□□□ 1.51
TMEM53-207ENST00000468117 ZBTB7AO95365 584 aa24.51■■□□□ 1.51
TMEM53-207ENST00000468117 IL1R1P14778 569 aa24.51■■□□□ 1.51
TMEM53-207ENST00000468117 HAND2P61296 217 aa24.51■■□□□ 1.51
TMEM53-207ENST00000468117 WDR66Q8TBY9 1149 aa24.51■■□□□ 1.51
TMEM53-207ENST00000468117 TCEANC2Q96MN5 208 aa24.51■■□□□ 1.51
TMEM53-207ENST00000468117 IMMTQ16891 758 aaKnown RBP24.51■■□□□ 1.51
TMEM53-207ENST00000468117 CNKSR1Q969H4 720 aa24.51■■□□□ 1.51
TMEM53-207ENST00000468117 ZNF219Q9P2Y4 722 aaPredicted RBP24.51■■□□□ 1.51
TMEM53-207ENST00000468117 RPS6KB1P23443 525 aa24.5■■□□□ 1.51
TMEM53-207ENST00000468117 SALL1Q9NSC2 1324 aa24.5■■□□□ 1.51
TMEM53-207ENST00000468117 E7EWF7 191 aa24.49■■□□□ 1.51
TMEM53-207ENST00000468117 PATL2C9JE40 543 aaKnown RBP24.49■■□□□ 1.51
TMEM53-207ENST00000468117 PRKAB2O43741 272 aa24.49■■□□□ 1.51
TMEM53-207ENST00000468117 DDIT3P35638 169 aa24.49■■□□□ 1.51
TMEM53-207ENST00000468117 ZGPATQ8N5A5 531 aaKnown RBP24.49■■□□□ 1.51
TMEM53-207ENST00000468117 MAGEB6P1A0A0J9YX57 407 aa24.48■■□□□ 1.51
TMEM53-207ENST00000468117 SPTY2D1Q68D10 685 aaPredicted RBP24.48■■□□□ 1.51
TMEM53-207ENST00000468117 ZC3H12CQ9C0D7 883 aaKnown RBP24.48■■□□□ 1.51
TMEM53-207ENST00000468117 EPB41L4AQ9HCS5 686 aaPredicted RBP24.48■■□□□ 1.51
TMEM53-207ENST00000468117 KIF13BQ9NQT8 1826 aa24.47■■□□□ 1.51
TMEM53-207ENST00000468117 KIAA1551Q9HCM1 1747 aa24.47■■□□□ 1.51
TMEM53-207ENST00000468117 UPF1Q92900 1129 aaKnown RBP eCLIP24.47■■□□□ 1.51
TMEM53-207ENST00000468117 LIMCH1Q9UPQ0 1083 aa24.47■■□□□ 1.51
TMEM53-207ENST00000468117 SLC4A4Q9Y6R1 1079 aa24.47■■□□□ 1.51
TMEM53-207ENST00000468117 GSG1L2A8MUP6 293 aa24.47■■□□□ 1.51
TMEM53-207ENST00000468117 ZNF213O14771 459 aa24.47■■□□□ 1.51
TMEM53-207ENST00000468117 IFNL3Q8IZI9 196 aa24.47■■□□□ 1.51
TMEM53-207ENST00000468117 RIOK1Q9BRS2 568 aaKnown RBP24.47■■□□□ 1.51
TMEM53-207ENST00000468117 ATF5Q9Y2D1 282 aaPredicted RBP24.47■■□□□ 1.51
TMEM53-207ENST00000468117 MYH2Q9UKX2 1941 aa24.46■■□□□ 1.51
TMEM53-207ENST00000468117 LDHBP07195 334 aaKnown RBP24.46■■□□□ 1.51
TMEM53-207ENST00000468117 GNAT2P19087 354 aa24.46■■□□□ 1.51
TMEM53-207ENST00000468117 DYNLL1P63167 89 aaKnown RBP24.46■■□□□ 1.51
TMEM53-207ENST00000468117 R3HDM1Q15032 1099 aaKnown RBP24.46■■□□□ 1.51
TMEM53-207ENST00000468117 GRIK5Q16478 980 aa24.46■■□□□ 1.51
TMEM53-207ENST00000468117 DZIP1Q86YF9 867 aaKnown RBP24.46■■□□□ 1.51
TMEM53-207ENST00000468117 CHMP5Q9NZZ3 219 aa24.45■■□□□ 1.51
TMEM53-207ENST00000468117 BAZ2AQ9UIF9 1905 aaKnown RBP24.45■■□□□ 1.51
TMEM53-207ENST00000468117 CUL4AQ13619 759 aa24.45■■□□□ 1.5
TMEM53-207ENST00000468117 ALX1Q15699 326 aa24.45■■□□□ 1.5
TMEM53-207ENST00000468117 C7orf43Q8WVR3 580 aa24.45■■□□□ 1.5
TMEM53-207ENST00000468117 COA1Q9GZY4 146 aa24.45■■□□□ 1.5
TMEM53-207ENST00000468117 NAPBQ9H115 298 aa24.45■■□□□ 1.5
TMEM53-207ENST00000468117 HMGB1P09429 215 aaKnown RBP24.44■■□□□ 1.5
TMEM53-207ENST00000468117 SDR42E1Q8WUS8 393 aa24.44■■□□□ 1.5
TMEM53-207ENST00000468117 NBPF3Q9H094 633 aa24.44■■□□□ 1.5
TMEM53-207ENST00000468117 ZMYM6O95789 1325 aa24.43■■□□□ 1.5
TMEM53-207ENST00000468117 LARGE1O95461 756 aa24.43■■□□□ 1.5
TMEM53-207ENST00000468117 TOB2Q14106 344 aaPredicted RBP24.43■■□□□ 1.5
TMEM53-207ENST00000468117 DOK7Q18PE1 504 aa24.43■■□□□ 1.5
TMEM53-207ENST00000468117 MTFR1LQ9H019 292 aa24.43■■□□□ 1.5
TMEM53-207ENST00000468117 ALDH8A1Q9H2A2 487 aaPredicted RBP24.43■■□□□ 1.5
TMEM53-207ENST00000468117 AATFQ9NY61 560 aaKnown RBP eCLIP24.43■■□□□ 1.5
TMEM53-207ENST00000468117 DHX32Q7L7V1 743 aaKnown RBP24.42■■□□□ 1.5
TMEM53-207ENST00000468117 EYA3Q99504 573 aa24.42■■□□□ 1.5
TMEM53-207ENST00000468117 LRRC2Q9BYS8 371 aa24.42■■□□□ 1.5
TMEM53-207ENST00000468117 NACAP1Q9BZK3 213 aa24.42■■□□□ 1.5
TMEM53-207ENST00000468117 DPEP1P16444 411 aa24.42■■□□□ 1.5
TMEM53-207ENST00000468117 TDO2P48775 406 aa24.42■■□□□ 1.5
TMEM53-207ENST00000468117 GTF2IP78347 998 aa24.42■■□□□ 1.5
TMEM53-207ENST00000468117 MFSD14BQ5SR56 506 aa24.42■■□□□ 1.5
TMEM53-207ENST00000468117 TPCN1Q9ULQ1 816 aa24.42■■□□□ 1.5
TMEM53-207ENST00000468117 KCNA3P22001 575 aa24.41■■□□□ 1.5
TMEM53-207ENST00000468117 ANKRD1Q15327 319 aa24.41■■□□□ 1.5
TMEM53-207ENST00000468117 DIXDC1Q155Q3 683 aa24.41■■□□□ 1.5
TMEM53-207ENST00000468117 TMED8Q6PL24 325 aaPredicted RBP24.41■■□□□ 1.5
TMEM53-207ENST00000468117 Q6ZUG5 572 aa24.41■■□□□ 1.5
TMEM53-207ENST00000468117 TBC1D10CQ8IV04 446 aa24.41■■□□□ 1.5
TMEM53-207ENST00000468117 C21orf2O43822 256 aa24.4■■□□□ 1.5
TMEM53-207ENST00000468117 FAM205AQ6ZU69 1335 aa24.4■■□□□ 1.5
TMEM53-207ENST00000468117 TTLL6Q8N841 843 aa24.4■■□□□ 1.5
TMEM53-207ENST00000468117 SNED1Q8TER0 1413 aa24.4■■□□□ 1.5
TMEM53-207ENST00000468117 POLD1P28340 1107 aa24.4■■□□□ 1.5
TMEM53-207ENST00000468117 EXOSC10Q01780 885 aaKnown RBP24.4■■□□□ 1.5
TMEM53-207ENST00000468117 ME3Q16798 604 aa24.4■■□□□ 1.5
TMEM53-207ENST00000468117 CHST3Q7LGC8 479 aa24.4■■□□□ 1.5
TMEM53-207ENST00000468117 INTS4Q96HW7 963 aaKnown RBP24.4■■□□□ 1.5
TMEM53-207ENST00000468117 CIZ1Q9ULV3 898 aaPredicted RBP24.4■■□□□ 1.5
TMEM53-207ENST00000468117 G3V3G9 751 aa24.39■■□□□ 1.5
TMEM53-207ENST00000468117 DCAF8Q5TAQ9 597 aa24.39■■□□□ 1.5
TMEM53-207ENST00000468117 TBC1D22AQ8WUA7 517 aa24.39■■□□□ 1.5
TMEM53-207ENST00000468117 FBXW7Q969H0 707 aa24.39■■□□□ 1.5
TMEM53-207ENST00000468117 ZSCAN31Q96LW9 406 aaPredicted RBP24.39■■□□□ 1.5
TMEM53-207ENST00000468117 IGSF3O75054 1194 aa24.39■■□□□ 1.49
TMEM53-207ENST00000468117 NCOA7Q8NI08 942 aa24.39■■□□□ 1.49
TMEM53-207ENST00000468117 RTFDC1Q9BY42 306 aaPredicted RBP24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms