RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 IQSEC3Q9UPP2 1182 aaPredicted RBP21.71■■□□□ 1.07
TRIM56-203ENST00000467847 IGF2BP3O00425 579 aaKnown RBP eCLIP21.7■■□□□ 1.06
TRIM56-203ENST00000467847 FRAT2O75474 233 aaPredicted RBP21.7■■□□□ 1.06
TRIM56-203ENST00000467847 CRKP46108 304 aa21.7■■□□□ 1.06
TRIM56-203ENST00000467847 CHAF1AQ13111 956 aaPredicted RBP21.7■■□□□ 1.06
TRIM56-203ENST00000467847 CAVIN4Q5BKX8 364 aa21.7■■□□□ 1.06
TRIM56-203ENST00000467847 FBXO33Q7Z6M2 555 aa21.7■■□□□ 1.06
TRIM56-203ENST00000467847 E9PSI1 815 aa21.69■■□□□ 1.06
TRIM56-203ENST00000467847 SSH1Q8WYL5 1049 aa21.69■■□□□ 1.06
TRIM56-203ENST00000467847 TCP10L2B9ZVM9 353 aa21.68■■□□□ 1.06
TRIM56-203ENST00000467847 PDE8BO95263 885 aa21.68■■□□□ 1.06
TRIM56-203ENST00000467847 TBC1D22AQ8WUA7 517 aa21.68■■□□□ 1.06
TRIM56-203ENST00000467847 GJA5P36382 358 aa21.67■■□□□ 1.06
TRIM56-203ENST00000467847 TNNI2P48788 182 aa21.67■■□□□ 1.06
TRIM56-203ENST00000467847 GRIK5Q16478 980 aa21.67■■□□□ 1.06
TRIM56-203ENST00000467847 OTUD7BQ6GQQ9 843 aa21.67■■□□□ 1.06
TRIM56-203ENST00000467847 CDAN1Q8IWY9 1227 aa21.67■■□□□ 1.06
TRIM56-203ENST00000467847 VGLL2Q8N8G2 317 aa21.67■■□□□ 1.06
TRIM56-203ENST00000467847 KLHDC4Q8TBB5 520 aa21.67■■□□□ 1.06
TRIM56-203ENST00000467847 TEPSINQ96N21 525 aa21.67■■□□□ 1.06
TRIM56-203ENST00000467847 TMEM39BQ9GZU3 492 aa21.67■■□□□ 1.06
TRIM56-203ENST00000467847 ELP3Q9H9T3 547 aa21.67■■□□□ 1.06
TRIM56-203ENST00000467847 OPTNQ96CV9 577 aa21.66■■□□□ 1.06
TRIM56-203ENST00000467847 USP44Q9H0E7 712 aa21.66■■□□□ 1.06
TRIM56-203ENST00000467847 BCAMP50895 628 aa21.65■■□□□ 1.06
TRIM56-203ENST00000467847 HDLBPQ00341 1268 aaKnown RBP21.65■■□□□ 1.06
TRIM56-203ENST00000467847 TEKT1Q969V4 418 aa21.65■■□□□ 1.06
TRIM56-203ENST00000467847 TRIM17Q9Y577 477 aa21.65■■□□□ 1.06
TRIM56-203ENST00000467847 MYH13Q9UKX3 1938 aa21.65■■□□□ 1.06
TRIM56-203ENST00000467847 HTTP42858 3142 aa21.64■■□□□ 1.05
TRIM56-203ENST00000467847 CRHR2Q13324 411 aa21.64■■□□□ 1.05
TRIM56-203ENST00000467847 PUM3Q15397 648 aaKnown RBP21.64■■□□□ 1.05
TRIM56-203ENST00000467847 SLFN5Q08AF3 891 aa21.63■■□□□ 1.05
TRIM56-203ENST00000467847 HABP4Q5JVS0 413 aaKnown RBP21.63■■□□□ 1.05
TRIM56-203ENST00000467847 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.63■■□□□ 1.05
TRIM56-203ENST00000467847 PTPN18Q99952 460 aa21.63■■□□□ 1.05
TRIM56-203ENST00000467847 KIF16BQ96L93 1317 aa21.62■■□□□ 1.05
TRIM56-203ENST00000467847 TESPA1A2RU30 521 aaPredicted RBP21.62■■□□□ 1.05
TRIM56-203ENST00000467847 IFIT1P09914 478 aaKnown RBP21.62■■□□□ 1.05
TRIM56-203ENST00000467847 CACNB3P54284 484 aa21.62■■□□□ 1.05
TRIM56-203ENST00000467847 VGLL4Q14135 290 aa21.62■■□□□ 1.05
TRIM56-203ENST00000467847 OTOP1Q7RTM1 612 aa21.62■■□□□ 1.05
TRIM56-203ENST00000467847 ERO1AQ96HE7 468 aa21.62■■□□□ 1.05
TRIM56-203ENST00000467847 MAST3O60307 1309 aa21.61■■□□□ 1.05
TRIM56-203ENST00000467847 FGFR2P21802 821 aa21.61■■□□□ 1.05
TRIM56-203ENST00000467847 MAP3K9P80192 1104 aa21.61■■□□□ 1.05
TRIM56-203ENST00000467847 ALDH1L2Q3SY69 923 aa21.61■■□□□ 1.05
TRIM56-203ENST00000467847 CNKSR2Q8WXI2 1034 aa21.61■■□□□ 1.05
TRIM56-203ENST00000467847 ZDHHC15Q96MV8 337 aa21.61■■□□□ 1.05
TRIM56-203ENST00000467847 SMC4Q9NTJ3 1288 aa21.61■■□□□ 1.05
TRIM56-203ENST00000467847 TMOD2Q9NZR1 351 aa21.61■■□□□ 1.05
TRIM56-203ENST00000467847 CSADQ9Y600 493 aa21.61■■□□□ 1.05
TRIM56-203ENST00000467847 CENPFP49454 3210 aa21.6■■□□□ 1.05
TRIM56-203ENST00000467847 EYA2O00167 538 aa21.6■■□□□ 1.05
TRIM56-203ENST00000467847 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.6■■□□□ 1.05
TRIM56-203ENST00000467847 CD99L2Q8TCZ2 262 aa21.6■■□□□ 1.05
TRIM56-203ENST00000467847 MS4A4AQ96JQ5 239 aa21.6■■□□□ 1.05
TRIM56-203ENST00000467847 MRIQ9BWK5 157 aa21.6■■□□□ 1.05
TRIM56-203ENST00000467847 SUGT1Q9Y2Z0 365 aa21.6■■□□□ 1.05
TRIM56-203ENST00000467847 SLC5A1P13866 664 aa21.59■■□□□ 1.05
TRIM56-203ENST00000467847 RFX5P48382 616 aaPredicted RBP21.59■■□□□ 1.05
TRIM56-203ENST00000467847 OTUD5Q96G74 571 aa21.59■■□□□ 1.05
TRIM56-203ENST00000467847 CDCA7LQ96GN5 454 aa21.59■■□□□ 1.05
TRIM56-203ENST00000467847 CCL15-CCL14A0A0B4J2E2 113 aa21.58■■□□□ 1.05
TRIM56-203ENST00000467847 GTF2A2P52657 109 aa21.58■■□□□ 1.05
TRIM56-203ENST00000467847 SP3Q02447 781 aa21.58■■□□□ 1.05
TRIM56-203ENST00000467847 CCL15Q16663 113 aa21.58■■□□□ 1.05
TRIM56-203ENST00000467847 INTS3Q68E01 1043 aaKnown RBP21.58■■□□□ 1.05
TRIM56-203ENST00000467847 APOBEC3HQ6NTF7 200 aaKnown RBP21.58■■□□□ 1.05
TRIM56-203ENST00000467847 BRI3BPQ8WY22 251 aa21.58■■□□□ 1.05
TRIM56-203ENST00000467847 LPIN2Q92539 896 aa21.58■■□□□ 1.05
TRIM56-203ENST00000467847 FKBP1CQ5VVH2 108 aa21.57■■□□□ 1.04
TRIM56-203ENST00000467847 HHIPL2Q6UWX4 724 aa21.57■■□□□ 1.04
TRIM56-203ENST00000467847 FAM83AQ86UY5 434 aa21.57■■□□□ 1.04
TRIM56-203ENST00000467847 HOOK2Q96ED9 719 aa21.57■■□□□ 1.04
TRIM56-203ENST00000467847 EFCC1Q9HA90 598 aa21.57■■□□□ 1.04
TRIM56-203ENST00000467847 PTPN22Q9Y2R2 807 aa21.57■■□□□ 1.04
TRIM56-203ENST00000467847 UBTFL1P0CB47 393 aaPredicted RBP21.56■■□□□ 1.04
TRIM56-203ENST00000467847 TAF1CQ15572 869 aaPredicted RBP21.56■■□□□ 1.04
TRIM56-203ENST00000467847 ATG9AQ7Z3C6 839 aa21.56■■□□□ 1.04
TRIM56-203ENST00000467847 WDR66Q8TBY9 1149 aa21.56■■□□□ 1.04
TRIM56-203ENST00000467847 WRNIP1Q96S55 665 aa21.56■■□□□ 1.04
TRIM56-203ENST00000467847 SPDYE5A6NIY4 337 aa21.55■■□□□ 1.04
TRIM56-203ENST00000467847 SIL1Q9H173 461 aa21.55■■□□□ 1.04
TRIM56-203ENST00000467847 ZFYVE28Q9HCC9 887 aa21.55■■□□□ 1.04
TRIM56-203ENST00000467847 SNCAIPQ9Y6H5 919 aa21.55■■□□□ 1.04
TRIM56-203ENST00000467847 AK9Q5TCS8 1911 aa21.55■■□□□ 1.04
TRIM56-203ENST00000467847 RPAP1Q9BWH6 1393 aaPredicted RBP21.54■■□□□ 1.04
TRIM56-203ENST00000467847 KIAA0100Q14667 2235 aaKnown RBP21.54■■□□□ 1.04
TRIM56-203ENST00000467847 ERO1BQ86YB8 467 aa21.54■■□□□ 1.04
TRIM56-203ENST00000467847 ZKSCAN4Q969J2 545 aaPredicted RBP21.54■■□□□ 1.04
TRIM56-203ENST00000467847 POTEFA5A3E0 1075 aa21.53■■□□□ 1.04
TRIM56-203ENST00000467847 CIAO1O76071 339 aa21.53■■□□□ 1.04
TRIM56-203ENST00000467847 ATP2B3Q16720 1220 aa21.53■■□□□ 1.04
TRIM56-203ENST00000467847 DCAF15Q66K64 600 aa21.53■■□□□ 1.04
TRIM56-203ENST00000467847 FAM43AQ8N2R8 423 aa21.53■■□□□ 1.04
TRIM56-203ENST00000467847 FBXO3Q9UK99 471 aa21.53■■□□□ 1.04
TRIM56-203ENST00000467847 NOB1Q9ULX3 412 aaKnown RBP21.53■■□□□ 1.04
TRIM56-203ENST00000467847 RBBP6Q7Z6E9 1792 aaKnown RBP21.52■■□□□ 1.04
TRIM56-203ENST00000467847 WDHD1O75717 1129 aaPredicted RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms