RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 C19orf57Q0VDD7 668 aa7.97□□□□□ -1.13
GAPVD1-211ENST00000467707 ADAMTSL4Q6UY14 1074 aa7.97□□□□□ -1.13
GAPVD1-211ENST00000467707 SULF2Q8IWU5 870 aa7.97□□□□□ -1.13
GAPVD1-211ENST00000467707 DTWD1Q8N5C7 304 aa7.97□□□□□ -1.13
GAPVD1-211ENST00000467707 KLHL23Q8NBE8 558 aa7.97□□□□□ -1.13
GAPVD1-211ENST00000467707 TRIM56Q9BRZ2 755 aaKnown RBP7.97□□□□□ -1.13
GAPVD1-211ENST00000467707 SUPT16HQ9Y5B9 1047 aaKnown RBP7.97□□□□□ -1.13
GAPVD1-211ENST00000467707 PIK3R2O00459 728 aa7.96□□□□□ -1.14
GAPVD1-211ENST00000467707 CYP11A1P05108 521 aa7.96□□□□□ -1.14
GAPVD1-211ENST00000467707 ARNTP27540 789 aa7.96□□□□□ -1.14
GAPVD1-211ENST00000467707 BAG6P46379 1132 aa7.96□□□□□ -1.14
GAPVD1-211ENST00000467707 TRIM42Q8IWZ5 723 aa7.96□□□□□ -1.14
GAPVD1-211ENST00000467707 RASGRP4Q8TDF6 673 aa7.96□□□□□ -1.14
GAPVD1-211ENST00000467707 GPRASP2Q96D09 838 aa7.96□□□□□ -1.14
GAPVD1-211ENST00000467707 GMLQ99445 158 aa7.96□□□□□ -1.14
GAPVD1-211ENST00000467707 ROBO2Q9HCK4 1378 aa7.96□□□□□ -1.14
GAPVD1-211ENST00000467707 MINDY4BA8MYZ0 360 aa7.95□□□□□ -1.14
GAPVD1-211ENST00000467707 SHISA8B8ZZ34 492 aa7.95□□□□□ -1.14
GAPVD1-211ENST00000467707 SOX1O00570 391 aaPredicted RBP7.95□□□□□ -1.14
GAPVD1-211ENST00000467707 PAGE1O75459 146 aa7.95□□□□□ -1.14
GAPVD1-211ENST00000467707 CAMK2GQ13555 558 aaPredicted RBP7.95□□□□□ -1.14
GAPVD1-211ENST00000467707 MAP3K11Q16584 847 aa7.95□□□□□ -1.14
GAPVD1-211ENST00000467707 HP1BP3Q5SSJ5 553 aaPredicted RBP7.95□□□□□ -1.14
GAPVD1-211ENST00000467707 LLGL2Q6P1M3 1020 aa7.95□□□□□ -1.14
GAPVD1-211ENST00000467707 MIR1-1HGQ9H1L0 117 aa7.95□□□□□ -1.14
GAPVD1-211ENST00000467707 USP35Q9P2H5 1018 aa7.95□□□□□ -1.14
GAPVD1-211ENST00000467707 FSCN2O14926 492 aa7.94□□□□□ -1.14
GAPVD1-211ENST00000467707 BMP6P22004 513 aa7.94□□□□□ -1.14
GAPVD1-211ENST00000467707 DGKGP49619 791 aa7.94□□□□□ -1.14
GAPVD1-211ENST00000467707 ZNF157P51786 506 aaPredicted RBP7.94□□□□□ -1.14
GAPVD1-211ENST00000467707 ARID5AQ03989 594 aa7.94□□□□□ -1.14
GAPVD1-211ENST00000467707 PAK2Q13177 524 aa7.94□□□□□ -1.14
GAPVD1-211ENST00000467707 COL9A2Q14055 689 aaPredicted RBP7.94□□□□□ -1.14
GAPVD1-211ENST00000467707 SNAP47Q5SQN1 464 aa7.94□□□□□ -1.14
GAPVD1-211ENST00000467707 LYPD4Q6UWN0 246 aa7.94□□□□□ -1.14
GAPVD1-211ENST00000467707 ZNF296Q8WUU4 475 aaPredicted RBP7.94□□□□□ -1.14
GAPVD1-211ENST00000467707 ARMC5Q96C12 935 aa7.94□□□□□ -1.14
GAPVD1-211ENST00000467707 NT5C1AQ9BXI3 368 aa7.94□□□□□ -1.14
GAPVD1-211ENST00000467707 ADAMTS1Q9UHI8 967 aa7.94□□□□□ -1.14
GAPVD1-211ENST00000467707 LINC01387J3KSC0 135 aa7.93□□□□□ -1.14
GAPVD1-211ENST00000467707 PF4P02776 101 aa7.93□□□□□ -1.14
GAPVD1-211ENST00000467707 NID1P14543 1247 aa7.93□□□□□ -1.14
GAPVD1-211ENST00000467707 TNNI2P48788 182 aa7.93□□□□□ -1.14
GAPVD1-211ENST00000467707 TREML4Q6UXN2 200 aa7.93□□□□□ -1.14
GAPVD1-211ENST00000467707 ILDR2Q71H61 639 aa7.93□□□□□ -1.14
GAPVD1-211ENST00000467707 SLC7A3Q8WY07 619 aa7.93□□□□□ -1.14
GAPVD1-211ENST00000467707 UBXN4Q92575 508 aa7.93□□□□□ -1.14
GAPVD1-211ENST00000467707 SEC16BQ96JE7 1060 aa7.93□□□□□ -1.14
GAPVD1-211ENST00000467707 CORO1BQ9BR76 489 aa7.93□□□□□ -1.14
GAPVD1-211ENST00000467707 TLR6Q9Y2C9 796 aa7.93□□□□□ -1.14
GAPVD1-211ENST00000467707 SPDYE3A6NKU9 549 aa7.92□□□□□ -1.14
GAPVD1-211ENST00000467707 GREM1O60565 184 aa7.92□□□□□ -1.14
GAPVD1-211ENST00000467707 TRIM37O94972 964 aa7.92□□□□□ -1.14
GAPVD1-211ENST00000467707 GSTP1P09211 210 aaKnown RBP7.92□□□□□ -1.14
GAPVD1-211ENST00000467707 TFE3P19532 575 aaPredicted RBP7.92□□□□□ -1.14
GAPVD1-211ENST00000467707 GSTM4Q03013 218 aa7.92□□□□□ -1.14
GAPVD1-211ENST00000467707 ZNF252P-AS1Q0IIN9 211 aa7.92□□□□□ -1.14
GAPVD1-211ENST00000467707 SUZ12Q15022 739 aaKnown RBP7.92□□□□□ -1.14
GAPVD1-211ENST00000467707 FBXL19Q6PCT2 694 aa7.92□□□□□ -1.14
GAPVD1-211ENST00000467707 GOLM1Q8NBJ4 401 aa7.92□□□□□ -1.14
GAPVD1-211ENST00000467707 LRRC3Q9BY71 257 aa7.92□□□□□ -1.14
GAPVD1-211ENST00000467707 TANGO6Q9C0B7 1094 aa7.92□□□□□ -1.14
GAPVD1-211ENST00000467707 CBX8Q9HC52 389 aa7.92□□□□□ -1.14
GAPVD1-211ENST00000467707 KRT82Q9NSB4 513 aa7.92□□□□□ -1.14
GAPVD1-211ENST00000467707 GARTP22102 1010 aa7.91□□□□□ -1.14
GAPVD1-211ENST00000467707 CDC25BP30305 580 aa7.91□□□□□ -1.14
GAPVD1-211ENST00000467707 FAM196AQ6ZSG2 479 aa7.91□□□□□ -1.14
GAPVD1-211ENST00000467707 PDZD3Q86UT5 571 aa7.91□□□□□ -1.14
GAPVD1-211ENST00000467707 SVOPQ8N4V2 548 aa7.91□□□□□ -1.14
GAPVD1-211ENST00000467707 NEDD1Q8NHV4 660 aa7.91□□□□□ -1.14
GAPVD1-211ENST00000467707 GATAD2BQ8WXI9 593 aa7.91□□□□□ -1.14
GAPVD1-211ENST00000467707 PRKAG2Q9UGJ0 569 aa7.91□□□□□ -1.14
GAPVD1-211ENST00000467707 F6X3S4 739 aa7.9□□□□□ -1.14
GAPVD1-211ENST00000467707 ATF4P18848 351 aaPredicted RBP7.9□□□□□ -1.14
GAPVD1-211ENST00000467707 ATP2B1P20020 1258 aa7.9□□□□□ -1.14
GAPVD1-211ENST00000467707 DNAJA1P31689 397 aaKnown RBP7.9□□□□□ -1.14
GAPVD1-211ENST00000467707 RAC1P63000 192 aa7.9□□□□□ -1.14
GAPVD1-211ENST00000467707 APOBRQ0VD83 1088 aa7.9□□□□□ -1.14
GAPVD1-211ENST00000467707 COL9A3Q14050 684 aaPredicted RBP7.9□□□□□ -1.14
GAPVD1-211ENST00000467707 SETDB1Q15047 1291 aa7.9□□□□□ -1.14
GAPVD1-211ENST00000467707 POU4F3Q15319 338 aa7.9□□□□□ -1.14
GAPVD1-211ENST00000467707 LCE2CQ5TA81 110 aa7.9□□□□□ -1.14
GAPVD1-211ENST00000467707 C8orf86Q6ZUL3 223 aa7.9□□□□□ -1.14
GAPVD1-211ENST00000467707 ZNF775Q96BV0 537 aaPredicted RBP7.9□□□□□ -1.14
GAPVD1-211ENST00000467707 NRSN2Q9GZP1 204 aa7.9□□□□□ -1.14
GAPVD1-211ENST00000467707 STRIP2Q9ULQ0 834 aa7.9□□□□□ -1.14
GAPVD1-211ENST00000467707 IGSF3O75054 1194 aa7.89□□□□□ -1.15
GAPVD1-211ENST00000467707 BPNT1O95861 308 aa7.89□□□□□ -1.15
GAPVD1-211ENST00000467707 FAM160A1Q05DH4 1040 aa7.89□□□□□ -1.15
GAPVD1-211ENST00000467707 MPP2Q14168 576 aa7.89□□□□□ -1.15
GAPVD1-211ENST00000467707 CWF19L2Q2TBE0 894 aaKnown RBP7.89□□□□□ -1.15
GAPVD1-211ENST00000467707 ZNF385CQ66K41 422 aaPredicted RBP7.89□□□□□ -1.15
GAPVD1-211ENST00000467707 TXNDC11Q6PKC3 985 aa7.89□□□□□ -1.15
GAPVD1-211ENST00000467707 EAF1Q96JC9 268 aaPredicted RBP7.89□□□□□ -1.15
GAPVD1-211ENST00000467707 RRAGCQ9HB90 399 aa7.89□□□□□ -1.15
GAPVD1-211ENST00000467707 CACNA2D2Q9NY47 1150 aa7.89□□□□□ -1.15
GAPVD1-211ENST00000467707 GNB5O14775 395 aa7.88□□□□□ -1.15
GAPVD1-211ENST00000467707 CD68P34810 354 aaPredicted RBP7.88□□□□□ -1.15
GAPVD1-211ENST00000467707 TRAPPC3LQ5T215 181 aa7.88□□□□□ -1.15
GAPVD1-211ENST00000467707 MAP1SQ66K74 1059 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms