RNA–Protein interactions for RNA: ENST00000467661.5

NELFA-213, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best)

Gene NELFA, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-213ENST00000467661 ZNF396Q96N95 335 aaPredicted RBP20.67■□□□□ 0.9
NELFA-213ENST00000467661 NUP62CLQ9H1M0 184 aa20.67■□□□□ 0.9
NELFA-213ENST00000467661 WWC3Q9ULE0 1092 aa20.67■□□□□ 0.9
NELFA-213ENST00000467661 CARMIL3Q8ND23 1372 aa20.66■□□□□ 0.9
NELFA-213ENST00000467661 CNTNAP4Q9C0A0 1308 aa20.66■□□□□ 0.9
NELFA-213ENST00000467661 KLF18A0A0U1RQI7 1052 aa20.66■□□□□ 0.9
NELFA-213ENST00000467661 MSNP26038 577 aaKnown RBP20.66■□□□□ 0.9
NELFA-213ENST00000467661 RASGRF1Q13972 1273 aa20.66■□□□□ 0.9
NELFA-213ENST00000467661 FUCA2Q9BTY2 467 aa20.66■□□□□ 0.9
NELFA-213ENST00000467661 CCDC39Q9UFE4 941 aa20.66■□□□□ 0.9
NELFA-213ENST00000467661 BTAF1O14981 1849 aa20.66■□□□□ 0.9
NELFA-213ENST00000467661 GOLGA8BA8MQT2 603 aa20.65■□□□□ 0.9
NELFA-213ENST00000467661 CCDC192P0DO97 292 aa20.65■□□□□ 0.9
NELFA-213ENST00000467661 MAP3K11Q16584 847 aa20.65■□□□□ 0.9
NELFA-213ENST00000467661 GIMAP6Q6P9H5 292 aa20.65■□□□□ 0.9
NELFA-213ENST00000467661 STRBPQ96SI9 672 aaKnown RBP20.65■□□□□ 0.9
NELFA-213ENST00000467661 ANTXR2P58335 489 aa20.64■□□□□ 0.9
NELFA-213ENST00000467661 RGS22Q8NE09 1264 aa20.64■□□□□ 0.9
NELFA-213ENST00000467661 CASZ1Q86V15 1759 aa20.64■□□□□ 0.89
NELFA-213ENST00000467661 PATL2C9JE40 543 aaKnown RBP20.64■□□□□ 0.89
NELFA-213ENST00000467661 GNAT2P19087 354 aa20.64■□□□□ 0.89
NELFA-213ENST00000467661 CHRNDQ07001 517 aa20.64■□□□□ 0.89
NELFA-213ENST00000467661 MAGEB6Q8N7X4 407 aa20.64■□□□□ 0.89
NELFA-213ENST00000467661 LINC00116Q8NCU8 138 aa20.64■□□□□ 0.89
NELFA-213ENST00000467661 BICD2Q8TD16 824 aa20.64■□□□□ 0.89
NELFA-213ENST00000467661 A0A1B0GUL6 1792 aa20.63■□□□□ 0.89
NELFA-213ENST00000467661 CPLX1O14810 134 aa20.63■□□□□ 0.89
NELFA-213ENST00000467661 LIG1P18858 919 aa20.63■□□□□ 0.89
NELFA-213ENST00000467661 TMEM87BQ96K49 555 aa20.63■□□□□ 0.89
NELFA-213ENST00000467661 ANGEL1Q9UNK9 670 aaKnown RBP20.63■□□□□ 0.89
NELFA-213ENST00000467661 C4AP0C0L4 1744 aa20.62■□□□□ 0.89
NELFA-213ENST00000467661 C4BP0C0L5 1744 aa20.62■□□□□ 0.89
NELFA-213ENST00000467661 TIAM2Q8IVF5 1701 aa20.62■□□□□ 0.89
NELFA-213ENST00000467661 SF3B3Q15393 1217 aaKnown RBP20.62■□□□□ 0.89
NELFA-213ENST00000467661 ANKRD18AQ8IVF6 992 aa20.62■□□□□ 0.89
NELFA-213ENST00000467661 NBPF3Q9H094 633 aa20.62■□□□□ 0.89
NELFA-213ENST00000467661 TNMDQ9H2S6 317 aa20.62■□□□□ 0.89
NELFA-213ENST00000467661 CHD4Q14839 1912 aa20.62■□□□□ 0.89
NELFA-213ENST00000467661 TNS1Q9HBL0 1735 aaKnown RBP20.62■□□□□ 0.89
NELFA-213ENST00000467661 TBC1D10CQ8IV04 446 aa20.61■□□□□ 0.89
NELFA-213ENST00000467661 NAPBQ9H115 298 aa20.61■□□□□ 0.89
NELFA-213ENST00000467661 GPHNQ9NQX3 736 aaPredicted RBP20.61■□□□□ 0.89
NELFA-213ENST00000467661 GNL3LQ9NVN8 582 aaKnown RBP20.61■□□□□ 0.89
NELFA-213ENST00000467661 NOL7Q9UMY1 257 aaKnown RBP20.61■□□□□ 0.89
NELFA-213ENST00000467661 MBD4O95243 580 aa20.61■□□□□ 0.89
NELFA-213ENST00000467661 RC3H1Q5TC82 1133 aaKnown RBP20.61■□□□□ 0.89
NELFA-213ENST00000467661 PTF1AQ7RTS3 328 aa20.61■□□□□ 0.89
NELFA-213ENST00000467661 NACAP1Q9BZK3 213 aa20.61■□□□□ 0.89
NELFA-213ENST00000467661 CLSTN2Q9H4D0 955 aa20.61■□□□□ 0.89
NELFA-213ENST00000467661 DACT1Q9NYF0 836 aa20.61■□□□□ 0.89
NELFA-213ENST00000467661 RCOR1Q9UKL0 485 aa20.61■□□□□ 0.89
NELFA-213ENST00000467661 HPS5Q9UPZ3 1129 aa20.61■□□□□ 0.89
NELFA-213ENST00000467661 PNPLA7Q6ZV29 1317 aa20.6■□□□□ 0.89
NELFA-213ENST00000467661 CDKL5O76039 1030 aa20.6■□□□□ 0.89
NELFA-213ENST00000467661 FDPSP14324 419 aaKnown RBP20.6■□□□□ 0.89
NELFA-213ENST00000467661 ADD1P35611 737 aaKnown RBP20.6■□□□□ 0.89
NELFA-213ENST00000467661 BCAMP50895 628 aa20.6■□□□□ 0.89
NELFA-213ENST00000467661 FOSBP53539 338 aa20.6■□□□□ 0.89
NELFA-213ENST00000467661 ERFEQ4G0M1 354 aa20.6■□□□□ 0.89
NELFA-213ENST00000467661 ILDR2Q71H61 639 aa20.6■□□□□ 0.89
NELFA-213ENST00000467661 IFNL3Q8IZI9 196 aa20.6■□□□□ 0.89
NELFA-213ENST00000467661 PGBD1Q96JS3 809 aa20.6■□□□□ 0.89
NELFA-213ENST00000467661 C8orf76Q96K31 380 aa20.6■□□□□ 0.89
NELFA-213ENST00000467661 NYXQ9GZU5 481 aa20.6■□□□□ 0.89
NELFA-213ENST00000467661 CNNM2Q9H8M5 875 aa20.6■□□□□ 0.89
NELFA-213ENST00000467661 SH2B2O14492 632 aaPredicted RBP20.59■□□□□ 0.89
NELFA-213ENST00000467661 UBE4AQ14139 1066 aa20.59■□□□□ 0.89
NELFA-213ENST00000467661 CPLX2Q6PUV4 134 aaKnown RBP20.59■□□□□ 0.89
NELFA-213ENST00000467661 ORC3Q9UBD5 711 aaPredicted RBP20.59■□□□□ 0.89
NELFA-213ENST00000467661 SNAP23O00161 211 aa20.58■□□□□ 0.89
NELFA-213ENST00000467661 TRIM37O94972 964 aa20.58■□□□□ 0.89
NELFA-213ENST00000467661 GTF2E1P29083 439 aaPredicted RBP20.58■□□□□ 0.89
NELFA-213ENST00000467661 RBM43Q6ZSC3 357 aaKnown RBP20.58■□□□□ 0.89
NELFA-213ENST00000467661 BSDC1Q9NW68 430 aaPredicted RBP20.58■□□□□ 0.89
NELFA-213ENST00000467661 LRP2BPQ9P2M1 347 aa20.58■□□□□ 0.89
NELFA-213ENST00000467661 COL24A1Q17RW2 1714 aa20.58■□□□□ 0.89
NELFA-213ENST00000467661 PTMAP06454 111 aaKnown RBP20.58■□□□□ 0.88
NELFA-213ENST00000467661 SLC10A5Q5PT55 438 aa20.58■□□□□ 0.88
NELFA-213ENST00000467661 KRT23Q9C075 422 aa20.58■□□□□ 0.88
NELFA-213ENST00000467661 BCL11BQ9C0K0 894 aaPredicted RBP20.58■□□□□ 0.88
NELFA-213ENST00000467661 B4E1Z4 1266 aa20.57■□□□□ 0.88
NELFA-213ENST00000467661 METAP2P50579 478 aaKnown RBP eCLIP20.57■□□□□ 0.889e-6■□□□□ 8.1
NELFA-213ENST00000467661 CYB5R4Q7L1T6 521 aa20.57■□□□□ 0.88
NELFA-213ENST00000467661 BRAPQ7Z569 592 aa20.57■□□□□ 0.88
NELFA-213ENST00000467661 ARMT1Q9H993 441 aa20.57■□□□□ 0.88
NELFA-213ENST00000467661 ZNF804BA4D1E1 1349 aa20.57■□□□□ 0.88
NELFA-213ENST00000467661 KDM4AO75164 1064 aa20.56■□□□□ 0.88
NELFA-213ENST00000467661 GUCY1B3Q02153 619 aa20.56■□□□□ 0.88
NELFA-213ENST00000467661 TYRO3Q06418 890 aa20.56■□□□□ 0.88
NELFA-213ENST00000467661 CAVIN4Q5BKX8 364 aa20.56■□□□□ 0.88
NELFA-213ENST00000467661 FBXO18Q8NFZ0 1043 aa20.56■□□□□ 0.88
NELFA-213ENST00000467661 FAM200AQ8TCP9 573 aa20.56■□□□□ 0.88
NELFA-213ENST00000467661 EPB41L4AQ9HCS5 686 aaPredicted RBP20.56■□□□□ 0.88
NELFA-213ENST00000467661 NARFQ9UHQ1 456 aa20.56■□□□□ 0.88
NELFA-213ENST00000467661 ZKSCAN5Q9Y2L8 839 aa20.56■□□□□ 0.88
NELFA-213ENST00000467661 CTAGE5O15320 804 aa20.56■□□□□ 0.88
NELFA-213ENST00000467661 NR1I2O75469 434 aa20.56■□□□□ 0.88
NELFA-213ENST00000467661 RPS6KA4O75676 772 aa20.56■□□□□ 0.88
NELFA-213ENST00000467661 CAMK4Q16566 473 aa20.56■□□□□ 0.88
NELFA-213ENST00000467661 SGMS1Q86VZ5 419 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms