RNA–Protein interactions for RNA: ENST00000466543.1

CYTH3-205, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-205ENST00000466543 SLC34A2O95436 690 aa21.7■■□□□ 1.06
CYTH3-205ENST00000466543 CHAF1AQ13111 956 aaPredicted RBP21.7■■□□□ 1.06
CYTH3-205ENST00000466543 METTL24Q5JXM2 366 aa21.7■■□□□ 1.06
CYTH3-205ENST00000466543 TCP10L2B9ZVM9 353 aa21.69■■□□□ 1.06
CYTH3-205ENST00000466543 IREB2P48200 963 aaKnown RBP21.69■■□□□ 1.06
CYTH3-205ENST00000466543 FBXO46Q6PJ61 603 aaPredicted RBP21.69■■□□□ 1.06
CYTH3-205ENST00000466543 CNKSR2Q8WXI2 1034 aa21.69■■□□□ 1.06
CYTH3-205ENST00000466543 PTPN18Q99952 460 aa21.69■■□□□ 1.06
CYTH3-205ENST00000466543 TMEM39BQ9GZU3 492 aa21.69■■□□□ 1.06
CYTH3-205ENST00000466543 PTPRCP08575 1304 aa21.69■■□□□ 1.06
CYTH3-205ENST00000466543 PDE8BO95263 885 aa21.68■■□□□ 1.06
CYTH3-205ENST00000466543 ALDH1A1P00352 501 aa21.68■■□□□ 1.06
CYTH3-205ENST00000466543 BCAMP50895 628 aa21.68■■□□□ 1.06
CYTH3-205ENST00000466543 INHBEP58166 350 aa21.68■■□□□ 1.06
CYTH3-205ENST00000466543 CAP1Q01518 475 aa21.68■■□□□ 1.06
CYTH3-205ENST00000466543 SLFN5Q08AF3 891 aa21.68■■□□□ 1.06
CYTH3-205ENST00000466543 CDCA7LQ96GN5 454 aa21.68■■□□□ 1.06
CYTH3-205ENST00000466543 UNCXA6NJT0 531 aa21.67■■□□□ 1.06
CYTH3-205ENST00000466543 E9PSI1 815 aa21.67■■□□□ 1.06
CYTH3-205ENST00000466543 RFX5P48382 616 aaPredicted RBP21.67■■□□□ 1.06
CYTH3-205ENST00000466543 CACNB3P54284 484 aa21.67■■□□□ 1.06
CYTH3-205ENST00000466543 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.67■■□□□ 1.06
CYTH3-205ENST00000466543 ANKRD13AQ8IZ07 590 aa21.67■■□□□ 1.06
CYTH3-205ENST00000466543 ELP3Q9H9T3 547 aa21.67■■□□□ 1.06
CYTH3-205ENST00000466543 MKI67P46013 3256 aaKnown RBP21.67■■□□□ 1.06
CYTH3-205ENST00000466543 BRCA2P51587 3418 aa21.67■■□□□ 1.06
CYTH3-205ENST00000466543 FGFR2P21802 821 aa21.66■■□□□ 1.06
CYTH3-205ENST00000466543 TNFAIP1Q13829 316 aa21.66■■□□□ 1.06
CYTH3-205ENST00000466543 VPS37DQ86XT2 251 aa21.66■■□□□ 1.06
CYTH3-205ENST00000466543 OPTNQ96CV9 577 aa21.66■■□□□ 1.06
CYTH3-205ENST00000466543 TESPA1A2RU30 521 aaPredicted RBP21.65■■□□□ 1.06
CYTH3-205ENST00000466543 CRHR2Q13324 411 aa21.65■■□□□ 1.06
CYTH3-205ENST00000466543 MS4A4AQ96JQ5 239 aa21.65■■□□□ 1.06
CYTH3-205ENST00000466543 OTOP1Q7RTM1 612 aa21.64■■□□□ 1.05
CYTH3-205ENST00000466543 MYH13Q9UKX3 1938 aa21.63■■□□□ 1.05
CYTH3-205ENST00000466543 HDLBPQ00341 1268 aaKnown RBP21.63■■□□□ 1.05
CYTH3-205ENST00000466543 VGLL4Q14135 290 aa21.63■■□□□ 1.05
CYTH3-205ENST00000466543 CAVIN4Q5BKX8 364 aa21.63■■□□□ 1.05
CYTH3-205ENST00000466543 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.63■■□□□ 1.05
CYTH3-205ENST00000466543 TRIM17Q9Y577 477 aa21.63■■□□□ 1.05
CYTH3-205ENST00000466543 FRAT2O75474 233 aaPredicted RBP21.62■■□□□ 1.05
CYTH3-205ENST00000466543 PUM3Q15397 648 aaKnown RBP21.62■■□□□ 1.05
CYTH3-205ENST00000466543 APOBEC3HQ6NTF7 200 aaKnown RBP21.62■■□□□ 1.05
CYTH3-205ENST00000466543 ATG9AQ7Z3C6 839 aa21.62■■□□□ 1.05
CYTH3-205ENST00000466543 CD99L2Q8TCZ2 262 aa21.62■■□□□ 1.05
CYTH3-205ENST00000466543 TBC1D22AQ8WUA7 517 aa21.62■■□□□ 1.05
CYTH3-205ENST00000466543 BRI3BPQ8WY22 251 aa21.62■■□□□ 1.05
CYTH3-205ENST00000466543 TEKT1Q969V4 418 aa21.62■■□□□ 1.05
CYTH3-205ENST00000466543 EYA2O00167 538 aa21.61■■□□□ 1.05
CYTH3-205ENST00000466543 TRMT2AQ8IZ69 625 aaKnown RBP21.61■■□□□ 1.05
CYTH3-205ENST00000466543 ZDHHC15Q96MV8 337 aa21.61■■□□□ 1.05
CYTH3-205ENST00000466543 KIF16BQ96L93 1317 aa21.6■■□□□ 1.05
CYTH3-205ENST00000466543 MAP3K9P80192 1104 aa21.6■■□□□ 1.05
CYTH3-205ENST00000466543 ALDH1L2Q3SY69 923 aa21.6■■□□□ 1.05
CYTH3-205ENST00000466543 SMC4Q9NTJ3 1288 aa21.6■■□□□ 1.05
CYTH3-205ENST00000466543 TNNI2P48788 182 aa21.59■■□□□ 1.05
CYTH3-205ENST00000466543 SNCAIPQ9Y6H5 919 aa21.59■■□□□ 1.05
CYTH3-205ENST00000466543 IFIT1P09914 478 aaKnown RBP21.58■■□□□ 1.05
CYTH3-205ENST00000466543 FAM43AQ8N2R8 423 aa21.58■■□□□ 1.05
CYTH3-205ENST00000466543 OTUD5Q96G74 571 aa21.58■■□□□ 1.05
CYTH3-205ENST00000466543 MRIQ9BWK5 157 aa21.58■■□□□ 1.05
CYTH3-205ENST00000466543 ZSWIM8A7E2V4 1837 aa21.57■■□□□ 1.04
CYTH3-205ENST00000466543 CCL15-CCL14A0A0B4J2E2 113 aa21.57■■□□□ 1.04
CYTH3-205ENST00000466543 CCL15Q16663 113 aa21.57■■□□□ 1.04
CYTH3-205ENST00000466543 OTUD7BQ6GQQ9 843 aa21.57■■□□□ 1.04
CYTH3-205ENST00000466543 LPIN2Q92539 896 aa21.57■■□□□ 1.04
CYTH3-205ENST00000466543 ZKSCAN4Q969J2 545 aaPredicted RBP21.57■■□□□ 1.04
CYTH3-205ENST00000466543 ERO1AQ96HE7 468 aa21.57■■□□□ 1.04
CYTH3-205ENST00000466543 SIL1Q9H173 461 aa21.57■■□□□ 1.04
CYTH3-205ENST00000466543 PTPN22Q9Y2R2 807 aa21.57■■□□□ 1.04
CYTH3-205ENST00000466543 POTEFA5A3E0 1075 aa21.56■■□□□ 1.04
CYTH3-205ENST00000466543 SPDYE5A6NIY4 337 aa21.56■■□□□ 1.04
CYTH3-205ENST00000466543 SP3Q02447 781 aa21.56■■□□□ 1.04
CYTH3-205ENST00000466543 HHIPL2Q6UWX4 724 aa21.56■■□□□ 1.04
CYTH3-205ENST00000466543 FAM83AQ86UY5 434 aa21.56■■□□□ 1.04
CYTH3-205ENST00000466543 SUGT1Q9Y2Z0 365 aa21.56■■□□□ 1.04
CYTH3-205ENST00000466543 CSADQ9Y600 493 aa21.56■■□□□ 1.04
CYTH3-205ENST00000466543 SLC5A1P13866 664 aa21.55■■□□□ 1.04
CYTH3-205ENST00000466543 DIXDC1Q155Q3 683 aa21.55■■□□□ 1.04
CYTH3-205ENST00000466543 FKBP1CQ5VVH2 108 aa21.55■■□□□ 1.04
CYTH3-205ENST00000466543 WRNIP1Q96S55 665 aa21.55■■□□□ 1.04
CYTH3-205ENST00000466543 NOB1Q9ULX3 412 aaKnown RBP21.55■■□□□ 1.04
CYTH3-205ENST00000466543 RBBP6Q7Z6E9 1792 aaKnown RBP21.54■■□□□ 1.04
CYTH3-205ENST00000466543 KIAA0100Q14667 2235 aaKnown RBP21.54■■□□□ 1.04
CYTH3-205ENST00000466543 PRDX5P30044 214 aa21.54■■□□□ 1.04
CYTH3-205ENST00000466543 GTF2A2P52657 109 aa21.54■■□□□ 1.04
CYTH3-205ENST00000466543 PRPF38BQ5VTL8 546 aaKnown RBP21.54■■□□□ 1.04
CYTH3-205ENST00000466543 EFCC1Q9HA90 598 aa21.54■■□□□ 1.04
CYTH3-205ENST00000466543 PA2G4Q9UQ80 394 aaKnown RBP21.54■■□□□ 1.04
CYTH3-205ENST00000466543 DAGLAQ9Y4D2 1042 aa21.54■■□□□ 1.04
CYTH3-205ENST00000466543 MAST3O60307 1309 aa21.54■■□□□ 1.04
CYTH3-205ENST00000466543 UBTFL1P0CB47 393 aaPredicted RBP21.53■■□□□ 1.04
CYTH3-205ENST00000466543 TAF1CQ15572 869 aaPredicted RBP21.53■■□□□ 1.04
CYTH3-205ENST00000466543 MIGA2Q7L4E1 593 aa21.53■■□□□ 1.04
CYTH3-205ENST00000466543 TMOD2Q9NZR1 351 aa21.53■■□□□ 1.04
CYTH3-205ENST00000466543 LRRFIP2Q9Y608 721 aaKnown RBP21.53■■□□□ 1.04
CYTH3-205ENST00000466543 RPAP1Q9BWH6 1393 aaPredicted RBP21.52■■□□□ 1.04
CYTH3-205ENST00000466543 IRF6O14896 467 aa21.52■■□□□ 1.04
CYTH3-205ENST00000466543 PHKA1P46020 1223 aa21.52■■□□□ 1.04
CYTH3-205ENST00000466543 NFIAQ12857 509 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 821.3 ms