RNA–Protein interactions for RNA: ENST00000466252.5

SNX21-208, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-208ENST00000466252 FMR1Q06787 632 aaKnown RBP eCLIP28.23■■■□□ 2.11
SNX21-208ENST00000466252 ANGEL2Q5VTE6 544 aaKnown RBP28.23■■■□□ 2.11
SNX21-208ENST00000466252 DCPSQ96C86 337 aaKnown RBP28.23■■■□□ 2.11
SNX21-208ENST00000466252 GLIS2Q9BZE0 524 aaPredicted RBP28.23■■■□□ 2.11
SNX21-208ENST00000466252 SPDYE2BA6NHP3 402 aa28.22■■■□□ 2.11
SNX21-208ENST00000466252 IGHDP01880 384 aa28.22■■■□□ 2.11
SNX21-208ENST00000466252 SPDYE6P0CI01 402 aa28.22■■■□□ 2.11
SNX21-208ENST00000466252 USP48Q86UV5 1035 aa28.22■■■□□ 2.11
SNX21-208ENST00000466252 GGA3Q9NZ52 723 aa28.22■■■□□ 2.11
SNX21-208ENST00000466252 AOX1Q06278 1338 aa28.21■■■□□ 2.11
SNX21-208ENST00000466252 PITPNM2Q9BZ72 1349 aa28.21■■■□□ 2.11
SNX21-208ENST00000466252 TRAF5O00463 557 aa28.21■■■□□ 2.11
SNX21-208ENST00000466252 LDHBP07195 334 aaKnown RBP28.21■■■□□ 2.11
SNX21-208ENST00000466252 IFIT2P09913 472 aaKnown RBP28.21■■■□□ 2.11
SNX21-208ENST00000466252 HHIPL2Q6UWX4 724 aa28.21■■■□□ 2.11
SNX21-208ENST00000466252 DLK2Q6UY11 383 aa28.21■■■□□ 2.11
SNX21-208ENST00000466252 TBC1D9Q6ZT07 1266 aa28.21■■■□□ 2.11
SNX21-208ENST00000466252 ZGPATQ8N5A5 531 aaKnown RBP28.21■■■□□ 2.11
SNX21-208ENST00000466252 SNRKQ9NRH2 765 aa28.21■■■□□ 2.11
SNX21-208ENST00000466252 CYP2E1P05181 493 aaPredicted RBP28.2■■■□□ 2.1
SNX21-208ENST00000466252 ABCF2Q9UG63 623 aa28.2■■■□□ 2.1
SNX21-208ENST00000466252 APLP1P51693 650 aa28.19■■■□□ 2.1
SNX21-208ENST00000466252 KRT26Q7Z3Y9 468 aa28.19■■■□□ 2.1
SNX21-208ENST00000466252 GCC1Q96CN9 775 aa28.19■■■□□ 2.1
SNX21-208ENST00000466252 ZDHHC15Q96MV8 337 aa28.19■■■□□ 2.1
SNX21-208ENST00000466252 RWDD1Q9H446 243 aaPredicted RBP28.19■■■□□ 2.1
SNX21-208ENST00000466252 MAST3O60307 1309 aa28.18■■■□□ 2.1
SNX21-208ENST00000466252 ZAP70P43403 619 aa28.18■■■□□ 2.1
SNX21-208ENST00000466252 RBM5P52756 815 aaKnown RBP eCLIP28.18■■■□□ 2.1
SNX21-208ENST00000466252 SPTY2D1Q68D10 685 aaPredicted RBP28.18■■■□□ 2.1
SNX21-208ENST00000466252 APOBEC3HQ6NTF7 200 aaKnown RBP28.18■■■□□ 2.1
SNX21-208ENST00000466252 ZNF384Q8TF68 577 aa28.18■■■□□ 2.1
SNX21-208ENST00000466252 TEKT1Q969V4 418 aa28.18■■■□□ 2.1
SNX21-208ENST00000466252 CST9Q5W186 159 aa28.17■■■□□ 2.1
SNX21-208ENST00000466252 SMC5Q8IY18 1101 aa28.17■■■□□ 2.1
SNX21-208ENST00000466252 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.17■■■□□ 2.1
SNX21-208ENST00000466252 FAM163AQ96GL9 167 aaPredicted RBP28.17■■■□□ 2.1
SNX21-208ENST00000466252 BCL11AQ9H165 835 aa28.17■■■□□ 2.1
SNX21-208ENST00000466252 ECM29Q5VYK3 1845 aa28.16■■■□□ 2.1
SNX21-208ENST00000466252 DIXDC1Q155Q3 683 aa28.16■■■□□ 2.1
SNX21-208ENST00000466252 ERICH6Q7L0X2 663 aa28.16■■■□□ 2.1
SNX21-208ENST00000466252 TDRD3Q9H7E2 651 aaKnown RBP28.16■■■□□ 2.1
SNX21-208ENST00000466252 SCAF8Q9UPN6 1271 aaKnown RBP28.16■■■□□ 2.1
SNX21-208ENST00000466252 MYO5AQ9Y4I1 1855 aaKnown RBP28.16■■■□□ 2.1
SNX21-208ENST00000466252 ADM5C9JUS6 153 aa28.15■■■□□ 2.1
SNX21-208ENST00000466252 SULF1Q8IWU6 871 aa28.15■■■□□ 2.1
SNX21-208ENST00000466252 TRPM7Q96QT4 1865 aa28.15■■■□□ 2.1
SNX21-208ENST00000466252 MYH2Q9UKX2 1941 aa28.14■■■□□ 2.1
SNX21-208ENST00000466252 ATP5JP18859 108 aa28.14■■■□□ 2.1
SNX21-208ENST00000466252 MECOMQ03112 1051 aa28.14■■■□□ 2.1
SNX21-208ENST00000466252 NSUN4Q96CB9 384 aaKnown RBP28.14■■■□□ 2.1
SNX21-208ENST00000466252 ZNF70Q9UC06 446 aaPredicted RBP28.14■■■□□ 2.1
SNX21-208ENST00000466252 MYO1BO43795 1136 aa28.13■■■□□ 2.09
SNX21-208ENST00000466252 SPDYE2Q495Y8 402 aa28.13■■■□□ 2.09
SNX21-208ENST00000466252 ANKRD45Q5TZF3 282 aa28.13■■■□□ 2.09
SNX21-208ENST00000466252 PIH1D3Q9NQM4 214 aaKnown RBP28.13■■■□□ 2.09
SNX21-208ENST00000466252 DAGLAQ9Y4D2 1042 aa28.13■■■□□ 2.09
SNX21-208ENST00000466252 NDUFB9Q9Y6M9 179 aa28.13■■■□□ 2.09
SNX21-208ENST00000466252 CLRN2A0PK11 232 aa28.12■■■□□ 2.09
SNX21-208ENST00000466252 ANTXR1Q9H6X2 564 aa28.12■■■□□ 2.09
SNX21-208ENST00000466252 IGSF3O75054 1194 aa28.11■■■□□ 2.09
SNX21-208ENST00000466252 HTRA3P83110 453 aa28.11■■■□□ 2.09
SNX21-208ENST00000466252 APOBEC3FQ8IUX4 373 aaKnown RBP28.11■■■□□ 2.09
SNX21-208ENST00000466252 LRP2BPQ9P2M1 347 aa28.11■■■□□ 2.09
SNX21-208ENST00000466252 GAKO14976 1311 aa28.11■■■□□ 2.09
SNX21-208ENST00000466252 TMEM88BA6NKF7 163 aa28.1■■■□□ 2.09
SNX21-208ENST00000466252 BOLA2Q9H3K6 86 aa28.1■■■□□ 2.09
SNX21-208ENST00000466252 PRAMEF18Q5VWM3 479 aa28.09■■■□□ 2.09
SNX21-208ENST00000466252 DZIP1Q86YF9 867 aaKnown RBP28.09■■■□□ 2.09
SNX21-208ENST00000466252 CDCA5Q96FF9 252 aa28.09■■■□□ 2.09
SNX21-208ENST00000466252 DEFB129Q9H1M3 183 aa28.09■■■□□ 2.09
SNX21-208ENST00000466252 CREBZFQ9NS37 354 aa28.09■■■□□ 2.09
SNX21-208ENST00000466252 ECHDC1Q9NTX5 307 aa28.09■■■□□ 2.09
SNX21-208ENST00000466252 RAI14Q9P0K7 980 aa28.09■■■□□ 2.09
SNX21-208ENST00000466252 GPR75-ASB3A0A0A6YYF3 556 aa28.08■■■□□ 2.09
SNX21-208ENST00000466252 CELF2O95319 508 aaKnown RBP28.08■■■□□ 2.09
SNX21-208ENST00000466252 CDC42EP5Q6NZY7 148 aa28.08■■■□□ 2.09
SNX21-208ENST00000466252 SLF2Q8IX21 1173 aa28.08■■■□□ 2.09
SNX21-208ENST00000466252 OTUD7AQ8TE49 926 aaPredicted RBP28.08■■■□□ 2.09
SNX21-208ENST00000466252 HAUS7Q99871 368 aa28.08■■■□□ 2.09
SNX21-208ENST00000466252 LDHCP07864 332 aa28.07■■■□□ 2.08
SNX21-208ENST00000466252 FKBP1CQ5VVH2 108 aa28.07■■■□□ 2.08
SNX21-208ENST00000466252 DNAJC5GQ8N7S2 189 aa28.07■■■□□ 2.08
SNX21-208ENST00000466252 SALL3Q9BXA9 1300 aa28.07■■■□□ 2.08
SNX21-208ENST00000466252 VEZTQ9HBM0 779 aa28.06■■■□□ 2.08
SNX21-208ENST00000466252 MROH7-TTC4A0A0A0MT08 1334 aa28.05■■■□□ 2.08
SNX21-208ENST00000466252 GSTO1P78417 241 aa28.05■■■□□ 2.08
SNX21-208ENST00000466252 RASA3Q14644 834 aa28.05■■■□□ 2.08
SNX21-208ENST00000466252 EDC3Q96F86 508 aaKnown RBP28.05■■■□□ 2.08
SNX21-208ENST00000466252 USP40Q9NVE5 1235 aa28.05■■■□□ 2.08
SNX21-208ENST00000466252 CACNB3P54284 484 aa28.04■■■□□ 2.08
SNX21-208ENST00000466252 TTF1Q15361 905 aaPredicted RBP28.04■■■□□ 2.08
SNX21-208ENST00000466252 PPP2R3BQ9Y5P8 575 aa28.04■■■□□ 2.08
SNX21-208ENST00000466252 TCP10L2B9ZVM9 353 aa28.03■■■□□ 2.08
SNX21-208ENST00000466252 GOLIM4O00461 696 aa28.03■■■□□ 2.08
SNX21-208ENST00000466252 NUCB1Q02818 461 aa28.03■■■□□ 2.08
SNX21-208ENST00000466252 B4GALNT3Q6L9W6 998 aa28.03■■■□□ 2.08
SNX21-208ENST00000466252 NAA16Q6N069 864 aaPredicted RBP28.03■■■□□ 2.08
SNX21-208ENST00000466252 ZNF408Q9H9D4 720 aa28.03■■■□□ 2.08
SNX21-208ENST00000466252 CNTNAP1P78357 1384 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms