RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 CPB1P15086 417 aa7.05□□□□□ -1.28
EXOSC3-204ENST00000465860 ELOAQ14241 798 aaKnown RBP7.05□□□□□ -1.28
EXOSC3-204ENST00000465860 OCLNQ16625 522 aa7.05□□□□□ -1.28
EXOSC3-204ENST00000465860 ILDR2Q71H61 639 aa7.05□□□□□ -1.28
EXOSC3-204ENST00000465860 DHX32Q7L7V1 743 aaKnown RBP7.05□□□□□ -1.28
EXOSC3-204ENST00000465860 FAM35AQ86V20 835 aa7.05□□□□□ -1.28
EXOSC3-204ENST00000465860 NACC1Q96RE7 527 aa7.05□□□□□ -1.28
EXOSC3-204ENST00000465860 LPIN3Q9BQK8 851 aa7.05□□□□□ -1.28
EXOSC3-204ENST00000465860 SEMA6BQ9H3T3 888 aa7.05□□□□□ -1.28
EXOSC3-204ENST00000465860 C11orf16Q9NQ32 467 aa7.05□□□□□ -1.28
EXOSC3-204ENST00000465860 TPSG1Q9NRR2 321 aa7.05□□□□□ -1.28
EXOSC3-204ENST00000465860 RTCBQ9Y3I0 505 aaKnown RBP7.05□□□□□ -1.28
EXOSC3-204ENST00000465860 PIK3R4Q99570 1358 aa7.05□□□□□ -1.28
EXOSC3-204ENST00000465860 ROBO2Q9HCK4 1378 aa7.05□□□□□ -1.28
EXOSC3-204ENST00000465860 NRXN1Q9ULB1 1477 aa7.04□□□□□ -1.28
EXOSC3-204ENST00000465860 TOM1O60784 492 aa7.04□□□□□ -1.28
EXOSC3-204ENST00000465860 RARAP10276 462 aa7.04□□□□□ -1.28
EXOSC3-204ENST00000465860 SELPP16109 830 aa7.04□□□□□ -1.28
EXOSC3-204ENST00000465860 MLLT1Q03111 559 aaPredicted RBP7.04□□□□□ -1.28
EXOSC3-204ENST00000465860 RSPO4Q2I0M5 234 aaPredicted RBP7.04□□□□□ -1.28
EXOSC3-204ENST00000465860 PERM1Q5SV97 790 aa7.04□□□□□ -1.28
EXOSC3-204ENST00000465860 TMEM132EQ6IEE7 984 aa7.04□□□□□ -1.28
EXOSC3-204ENST00000465860 TREML1Q86YW5 311 aa7.04□□□□□ -1.28
EXOSC3-204ENST00000465860 DMRTC2Q8IXT2 367 aaPredicted RBP7.04□□□□□ -1.28
EXOSC3-204ENST00000465860 TRPM4Q8TD43 1214 aa7.04□□□□□ -1.28
EXOSC3-204ENST00000465860 SAP130Q9H0E3 1048 aa7.04□□□□□ -1.28
EXOSC3-204ENST00000465860 DHX57Q6P158 1386 aaKnown RBP7.04□□□□□ -1.28
EXOSC3-204ENST00000465860 ELNP15502 786 aa7.03□□□□□ -1.28
EXOSC3-204ENST00000465860 GPLD1P80108 840 aa7.03□□□□□ -1.28
EXOSC3-204ENST00000465860 PLAURQ03405 335 aa7.03□□□□□ -1.28
EXOSC3-204ENST00000465860 GRIK5Q16478 980 aa7.03□□□□□ -1.28
EXOSC3-204ENST00000465860 PCSK7Q16549 785 aa7.03□□□□□ -1.28
EXOSC3-204ENST00000465860 NKAPLQ5M9Q1 402 aa7.03□□□□□ -1.28
EXOSC3-204ENST00000465860 XP32Q5T750 250 aa7.03□□□□□ -1.28
EXOSC3-204ENST00000465860 RGL4Q8IZJ4 473 aa7.03□□□□□ -1.28
EXOSC3-204ENST00000465860 KNDC1Q76NI1 1749 aa7.03□□□□□ -1.28
EXOSC3-204ENST00000465860 MYOM2P54296 1465 aa7.03□□□□□ -1.28
EXOSC3-204ENST00000465860 PHLPP1O60346 1717 aa7.02□□□□□ -1.29
EXOSC3-204ENST00000465860 C9orf172C9J069 976 aa7.02□□□□□ -1.29
EXOSC3-204ENST00000465860 EGFRP00533 1210 aa7.02□□□□□ -1.29
EXOSC3-204ENST00000465860 RAC1P63000 192 aa7.02□□□□□ -1.29
EXOSC3-204ENST00000465860 SHISA2Q6UWI4 295 aa7.02□□□□□ -1.29
EXOSC3-204ENST00000465860 CAPN12Q6ZSI9 719 aa7.02□□□□□ -1.29
EXOSC3-204ENST00000465860 ETFBKMTQ8IXQ9 262 aa7.02□□□□□ -1.29
EXOSC3-204ENST00000465860 FMR1NBQ8N0W7 255 aaPredicted RBP7.02□□□□□ -1.29
EXOSC3-204ENST00000465860 CMTR1Q8N1G2 835 aaKnown RBP7.02□□□□□ -1.29
EXOSC3-204ENST00000465860 FRRS1LQ9P0K9 344 aa7.02□□□□□ -1.29
EXOSC3-204ENST00000465860 KCNMB2Q9Y691 235 aa7.02□□□□□ -1.29
EXOSC3-204ENST00000465860 MSH6P52701 1360 aa7.02□□□□□ -1.29
EXOSC3-204ENST00000465860 PLEKHH1Q9ULM0 1364 aa7.02□□□□□ -1.29
EXOSC3-204ENST00000465860 RGPD8O14715 1765 aaPredicted RBP7.02□□□□□ -1.29
EXOSC3-204ENST00000465860 FAM135BQ49AJ0 1406 aa7.01□□□□□ -1.29
EXOSC3-204ENST00000465860 ADGRB1O14514 1584 aa7.01□□□□□ -1.29
EXOSC3-204ENST00000465860 XYLBO75191 536 aa7.01□□□□□ -1.29
EXOSC3-204ENST00000465860 ATG7O95352 703 aa7.01□□□□□ -1.29
EXOSC3-204ENST00000465860 ADGRE1Q14246 886 aa7.01□□□□□ -1.29
EXOSC3-204ENST00000465860 MBTPS1Q14703 1052 aa7.01□□□□□ -1.29
EXOSC3-204ENST00000465860 FAM26DQ5JW98 314 aa7.01□□□□□ -1.29
EXOSC3-204ENST00000465860 TMEM164Q5U3C3 297 aa7.01□□□□□ -1.29
EXOSC3-204ENST00000465860 MSL1Q68DK7 614 aa7.01□□□□□ -1.29
EXOSC3-204ENST00000465860 ELMSAN1Q6PJG2 1045 aa7.01□□□□□ -1.29
EXOSC3-204ENST00000465860 HFE2Q6ZVN8 426 aa7.01□□□□□ -1.29
EXOSC3-204ENST00000465860 LENG1Q96BZ8 264 aaPredicted RBP7.01□□□□□ -1.29
EXOSC3-204ENST00000465860 SIN3AQ96ST3 1273 aa7.01□□□□□ -1.29
EXOSC3-204ENST00000465860 ZMYND15Q9H091 742 aa7.01□□□□□ -1.29
EXOSC3-204ENST00000465860 CXXC1Q9P0U4 656 aaPredicted RBP7.01□□□□□ -1.29
EXOSC3-204ENST00000465860 SLAIN2Q9P270 581 aa7.01□□□□□ -1.29
EXOSC3-204ENST00000465860 COL16A1Q07092 1604 aaPredicted RBP7.01□□□□□ -1.29
EXOSC3-204ENST00000465860 MST1RQ04912 1400 aa7.01□□□□□ -1.29
EXOSC3-204ENST00000465860 PTCH1Q13635 1447 aa7.01□□□□□ -1.29
EXOSC3-204ENST00000465860 PRAG1Q86YV5 1406 aa7.01□□□□□ -1.29
EXOSC3-204ENST00000465860 ADGRL3Q9HAR2 1447 aa7.01□□□□□ -1.29
EXOSC3-204ENST00000465860 NCOA3Q9Y6Q9 1424 aa7.01□□□□□ -1.29
EXOSC3-204ENST00000465860 MED1Q15648 1581 aaPredicted RBP7□□□□□ -1.29
EXOSC3-204ENST00000465860 NRLP54845 237 aa7□□□□□ -1.29
EXOSC3-204ENST00000465860 C16orf46Q6P387 395 aa7□□□□□ -1.29
EXOSC3-204ENST00000465860 WAPLQ7Z5K2 1190 aa7□□□□□ -1.29
EXOSC3-204ENST00000465860 DCAF11Q8TEB1 546 aa7□□□□□ -1.29
EXOSC3-204ENST00000465860 DDX17Q92841 729 aaKnown RBP7□□□□□ -1.29
EXOSC3-204ENST00000465860 COL26A1Q96A83 441 aa7□□□□□ -1.29
EXOSC3-204ENST00000465860 MKNK1Q9BUB5 465 aa7□□□□□ -1.29
EXOSC3-204ENST00000465860 C19orf44Q9H6X5 657 aa7□□□□□ -1.29
EXOSC3-204ENST00000465860 C14orf93Q9H972 538 aaKnown RBP7□□□□□ -1.29
EXOSC3-204ENST00000465860 TLR7Q9NYK1 1049 aaKnown RBP7□□□□□ -1.29
EXOSC3-204ENST00000465860 STK26Q9P289 416 aa7□□□□□ -1.29
EXOSC3-204ENST00000465860 LAMC1P11047 1609 aa7□□□□□ -1.29
EXOSC3-204ENST00000465860 NHSL1Q5SYE7 1610 aa7□□□□□ -1.29
EXOSC3-204ENST00000465860 TECPR2O15040 1411 aa7□□□□□ -1.29
EXOSC3-204ENST00000465860 YTHDC2Q9H6S0 1430 aaKnown RBP7□□□□□ -1.29
EXOSC3-204ENST00000465860 ARHGEF28Q8N1W1 1705 aaKnown RBP6.99□□□□□ -1.29
EXOSC3-204ENST00000465860 TNFRSF10BO14763 440 aa6.99□□□□□ -1.29
EXOSC3-204ENST00000465860 DYRK3O43781 588 aa6.99□□□□□ -1.29
EXOSC3-204ENST00000465860 MMP20O60882 483 aa6.99□□□□□ -1.29
EXOSC3-204ENST00000465860 BRD2P25440 801 aaKnown RBP6.99□□□□□ -1.29
EXOSC3-204ENST00000465860 TRIM26Q12899 539 aaPredicted RBP6.99□□□□□ -1.29
EXOSC3-204ENST00000465860 C14orf37Q86TY3 774 aa6.99□□□□□ -1.29
EXOSC3-204ENST00000465860 Q8N3U1 123 aa6.99□□□□□ -1.29
EXOSC3-204ENST00000465860 TTC9Q92623 222 aa6.99□□□□□ -1.29
EXOSC3-204ENST00000465860 SMG9Q9H0W8 520 aaKnown RBP6.99□□□□□ -1.29
EXOSC3-204ENST00000465860 FMN2Q9NZ56 1722 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms