RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 SHISA5Q8N114 240 aa5.72□□□□□ -1.49
SNX4-202ENST00000465505 C2CD4AQ8NCU7 369 aaPredicted RBP5.72□□□□□ -1.49
SNX4-202ENST00000465505 FBLIM1Q8WUP2 373 aa5.72□□□□□ -1.49
SNX4-202ENST00000465505 TUT1Q9H6E5 874 aaKnown RBP5.72□□□□□ -1.49
SNX4-202ENST00000465505 PIM2Q9P1W9 311 aa5.72□□□□□ -1.49
SNX4-202ENST00000465505 WNT11O96014 354 aa5.71□□□□□ -1.5
SNX4-202ENST00000465505 IGHA2P01877 340 aa5.71□□□□□ -1.5
SNX4-202ENST00000465505 CYP11A1P05108 521 aa5.71□□□□□ -1.5
SNX4-202ENST00000465505 NEFLP07196 543 aa5.71□□□□□ -1.5
SNX4-202ENST00000465505 CTSBP07858 339 aa5.71□□□□□ -1.5
SNX4-202ENST00000465505 MAOBP27338 520 aa5.71□□□□□ -1.5
SNX4-202ENST00000465505 USP11P51784 963 aa5.71□□□□□ -1.5
SNX4-202ENST00000465505 NFKBIBQ15653 356 aa5.71□□□□□ -1.5
SNX4-202ENST00000465505 TXNDC2Q86VQ3 553 aa5.71□□□□□ -1.5
SNX4-202ENST00000465505 FBXL6Q8N531 539 aa5.71□□□□□ -1.5
SNX4-202ENST00000465505 EZH1Q92800 747 aaPredicted RBP5.71□□□□□ -1.5
SNX4-202ENST00000465505 FAM129BQ96TA1 746 aa5.71□□□□□ -1.5
SNX4-202ENST00000465505 ITPKAP23677 461 aa5.7□□□□□ -1.5
SNX4-202ENST00000465505 IRAK1P51617 712 aa5.7□□□□□ -1.5
SNX4-202ENST00000465505 PDE3BQ13370 1112 aa5.7□□□□□ -1.5
SNX4-202ENST00000465505 ORC1Q13415 861 aa5.7□□□□□ -1.5
SNX4-202ENST00000465505 ERICH6Q7L0X2 663 aa5.7□□□□□ -1.5
SNX4-202ENST00000465505 GIMAP7Q8NHV1 300 aa5.7□□□□□ -1.5
SNX4-202ENST00000465505 CITED4Q96RK1 184 aa5.7□□□□□ -1.5
SNX4-202ENST00000465505 TRIM56Q9BRZ2 755 aaKnown RBP5.7□□□□□ -1.5
SNX4-202ENST00000465505 ATG3Q9NT62 314 aa5.7□□□□□ -1.5
SNX4-202ENST00000465505 NDUFB5O43674 189 aa5.69□□□□□ -1.5
SNX4-202ENST00000465505 CPNE3O75131 537 aaKnown RBP5.69□□□□□ -1.5
SNX4-202ENST00000465505 ECEL1O95672 775 aa5.69□□□□□ -1.5
SNX4-202ENST00000465505 B3GALT4O96024 378 aa5.69□□□□□ -1.5
SNX4-202ENST00000465505 ADH5P11766 374 aa5.69□□□□□ -1.5
SNX4-202ENST00000465505 FOSL1P15407 271 aa5.69□□□□□ -1.5
SNX4-202ENST00000465505 TAL1P17542 331 aaPredicted RBP5.69□□□□□ -1.5
SNX4-202ENST00000465505 ADMP35318 185 aa5.69□□□□□ -1.5
SNX4-202ENST00000465505 POU4F3Q15319 338 aa5.69□□□□□ -1.5
SNX4-202ENST00000465505 PAOXQ6QHF9 649 aa5.69□□□□□ -1.5
SNX4-202ENST00000465505 KRTAP1-3Q8IUG1 177 aa5.69□□□□□ -1.5
SNX4-202ENST00000465505 GATA6Q92908 595 aa5.69□□□□□ -1.5
SNX4-202ENST00000465505 OSBPL1AQ9BXW6 950 aa5.69□□□□□ -1.5
SNX4-202ENST00000465505 LEMD3Q9Y2U8 911 aa5.69□□□□□ -1.5
SNX4-202ENST00000465505 CPSF6Q16630 551 aaKnown RBP eCLIP5.68□□□□□ -1.5
SNX4-202ENST00000465505 MSMPQ1L6U9 139 aa5.68□□□□□ -1.5
SNX4-202ENST00000465505 KRTAP19-1Q8IUB9 90 aa5.68□□□□□ -1.5
SNX4-202ENST00000465505 EHD4Q9H223 541 aa5.68□□□□□ -1.5
SNX4-202ENST00000465505 ZNF576Q9H609 170 aa5.68□□□□□ -1.5
SNX4-202ENST00000465505 ZFYVE1Q9HBF4 777 aa5.68□□□□□ -1.5
SNX4-202ENST00000465505 NPHS2Q9NP85 383 aa5.68□□□□□ -1.5
SNX4-202ENST00000465505 PRKAG2Q9UGJ0 569 aa5.68□□□□□ -1.5
SNX4-202ENST00000465505 ACTL7BQ9Y614 415 aa5.68□□□□□ -1.5
SNX4-202ENST00000465505 EIF1AYO14602 144 aaKnown RBP5.67□□□□□ -1.5
SNX4-202ENST00000465505 NFICP08651 508 aa5.67□□□□□ -1.5
SNX4-202ENST00000465505 PTPN12Q05209 780 aaKnown RBP5.67□□□□□ -1.5
SNX4-202ENST00000465505 ZAR1Q86SH2 424 aa5.67□□□□□ -1.5
SNX4-202ENST00000465505 CCDC74AQ96AQ1 378 aa5.67□□□□□ -1.5
SNX4-202ENST00000465505 TBC1D32Q96NH3 1257 aa5.67□□□□□ -1.5
SNX4-202ENST00000465505 FMNL2Q96PY5 1086 aa5.67□□□□□ -1.5
SNX4-202ENST00000465505 YIPF2Q9BWQ6 316 aa5.67□□□□□ -1.5
SNX4-202ENST00000465505 NIF3L1Q9GZT8 377 aa5.67□□□□□ -1.5
SNX4-202ENST00000465505 DNAJC25Q9H1X3 360 aa5.67□□□□□ -1.5
SNX4-202ENST00000465505 GSX1Q9H4S2 264 aaPredicted RBP5.67□□□□□ -1.5
SNX4-202ENST00000465505 GPR182O15218 404 aa5.66□□□□□ -1.5
SNX4-202ENST00000465505 PAX4O43316 350 aa5.66□□□□□ -1.5
SNX4-202ENST00000465505 AKAP4Q5JQC9 854 aa5.66□□□□□ -1.5
SNX4-202ENST00000465505 HP1BP3Q5SSJ5 553 aaPredicted RBP5.66□□□□□ -1.5
SNX4-202ENST00000465505 LCE3BQ5TA77 95 aa5.66□□□□□ -1.5
SNX4-202ENST00000465505 DYMQ7RTS9 669 aa5.66□□□□□ -1.5
SNX4-202ENST00000465505 DDX54Q8TDD1 881 aaKnown RBP5.66□□□□□ -1.5
SNX4-202ENST00000465505 CORO1BQ9BR76 489 aa5.66□□□□□ -1.5
SNX4-202ENST00000465505 METTL22Q9BUU2 404 aaPredicted RBP5.66□□□□□ -1.5
SNX4-202ENST00000465505 SEMA6CQ9H3T2 930 aa5.66□□□□□ -1.5
SNX4-202ENST00000465505 ACSS3Q9H6R3 686 aa5.66□□□□□ -1.5
SNX4-202ENST00000465505 GOLGA2P5Q9HBQ8 144 aa5.66□□□□□ -1.5
SNX4-202ENST00000465505 ABCB6Q9NP58 842 aa5.66□□□□□ -1.5
SNX4-202ENST00000465505 RAD18Q9NS91 495 aa5.66□□□□□ -1.5
SNX4-202ENST00000465505 FAM105AQ9NUU6 356 aa5.66□□□□□ -1.5
SNX4-202ENST00000465505 ADGRE2Q9UHX3 823 aa5.66□□□□□ -1.5
SNX4-202ENST00000465505 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.65□□□□□ -1.5
SNX4-202ENST00000465505 TMEM238LA0A1B0GVL6 79 aa5.65□□□□□ -1.5
SNX4-202ENST00000465505 FAM170BA6NMN3 283 aa5.65□□□□□ -1.5
SNX4-202ENST00000465505 CYP26A1O43174 497 aa5.65□□□□□ -1.5
SNX4-202ENST00000465505 MAP7Q14244 749 aa5.65□□□□□ -1.5
SNX4-202ENST00000465505 RPS26P11Q5JNZ5 115 aaPredicted RBP5.65□□□□□ -1.5
SNX4-202ENST00000465505 PRPF40BQ6NWY9 871 aaKnown RBP5.65□□□□□ -1.5
SNX4-202ENST00000465505 SEZ6L2Q6UXD5 910 aa5.65□□□□□ -1.5
SNX4-202ENST00000465505 NFXL1Q6ZNB6 911 aa5.65□□□□□ -1.5
SNX4-202ENST00000465505 CCDC39Q9UFE4 941 aa5.65□□□□□ -1.5
SNX4-202ENST00000465505 SYNGAP1Q96PV0 1343 aa5.65□□□□□ -1.51
SNX4-202ENST00000465505 AOC2O75106 756 aa5.64□□□□□ -1.51
SNX4-202ENST00000465505 PRNPP04156 253 aa5.64□□□□□ -1.51
SNX4-202ENST00000465505 ASPAP45381 313 aa5.64□□□□□ -1.51
SNX4-202ENST00000465505 FAAP100Q0VG06 881 aa5.64□□□□□ -1.51
SNX4-202ENST00000465505 RETREG2Q8NC44 543 aa5.64□□□□□ -1.51
SNX4-202ENST00000465505 GLIS3Q8NEA6 775 aa5.64□□□□□ -1.51
SNX4-202ENST00000465505 TMC1Q8TDI8 760 aa5.64□□□□□ -1.51
SNX4-202ENST00000465505 ALKBH8Q96BT7 664 aaKnown RBP5.64□□□□□ -1.51
SNX4-202ENST00000465505 WDR18Q9BV38 432 aa5.64□□□□□ -1.51
SNX4-202ENST00000465505 RBCK1Q9BYM8 510 aa5.64□□□□□ -1.51
SNX4-202ENST00000465505 C1GALT1Q9NS00 363 aa5.64□□□□□ -1.51
SNX4-202ENST00000465505 DYNC1LI2O43237 492 aaPredicted RBP5.63□□□□□ -1.51
SNX4-202ENST00000465505 GADD45BO75293 160 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms