RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 M0R082 166 aa8.15□□□□□ -1.1
CACNA1C-223ENST00000465278 EIF4BP23588 611 aaKnown RBP8.15□□□□□ -1.1
CACNA1C-223ENST00000465278 GRIA4P48058 902 aa8.15□□□□□ -1.1
CACNA1C-223ENST00000465278 C20orf204Q6ZNR8 217 aa8.15□□□□□ -1.1
CACNA1C-223ENST00000465278 CCNJLQ8IV13 435 aa8.15□□□□□ -1.1
CACNA1C-223ENST00000465278 SVOPQ8N4V2 548 aa8.15□□□□□ -1.1
CACNA1C-223ENST00000465278 GLIS3Q8NEA6 775 aa8.15□□□□□ -1.1
CACNA1C-223ENST00000465278 NEDD1Q8NHV4 660 aa8.15□□□□□ -1.1
CACNA1C-223ENST00000465278 ZNF417Q8TAU3 575 aa8.15□□□□□ -1.1
CACNA1C-223ENST00000465278 ZNF587Q96SQ5 575 aaPredicted RBP8.15□□□□□ -1.1
CACNA1C-223ENST00000465278 RRAGCQ9HB90 399 aa8.15□□□□□ -1.1
CACNA1C-223ENST00000465278 SH2B1Q9NRF2 756 aaPredicted RBP8.15□□□□□ -1.1
CACNA1C-223ENST00000465278 NHSL1Q5SYE7 1610 aa8.14□□□□□ -1.11
CACNA1C-223ENST00000465278 CDK12Q9NYV4 1490 aaPredicted RBP8.14□□□□□ -1.11
CACNA1C-223ENST00000465278 MAP3K10Q02779 954 aa8.14□□□□□ -1.11
CACNA1C-223ENST00000465278 TMEM102Q8N9M5 508 aaPredicted RBP8.14□□□□□ -1.11
CACNA1C-223ENST00000465278 FRMD6Q96NE9 622 aa8.14□□□□□ -1.11
CACNA1C-223ENST00000465278 C12orf49Q9H741 205 aa8.14□□□□□ -1.11
CACNA1C-223ENST00000465278 AKAP2Q9Y2D5 859 aa8.14□□□□□ -1.11
CACNA1C-223ENST00000465278 ZNF142P52746 1687 aaPredicted RBP8.14□□□□□ -1.11
CACNA1C-223ENST00000465278 PHLDB1Q86UU1 1377 aa8.13□□□□□ -1.11
CACNA1C-223ENST00000465278 A0A096LPE4 126 aa8.13□□□□□ -1.11
CACNA1C-223ENST00000465278 TMEM238LA0A1B0GVL6 79 aa8.13□□□□□ -1.11
CACNA1C-223ENST00000465278 A0A1W2PPZ6 126 aa8.13□□□□□ -1.11
CACNA1C-223ENST00000465278 GIPC1O14908 333 aa8.13□□□□□ -1.11
CACNA1C-223ENST00000465278 LILRB5O75023 590 aa8.13□□□□□ -1.11
CACNA1C-223ENST00000465278 TSNAXIP1Q2TAA8 658 aa8.13□□□□□ -1.11
CACNA1C-223ENST00000465278 IL22RA1Q8N6P7 574 aa8.13□□□□□ -1.11
CACNA1C-223ENST00000465278 BACH2Q9BYV9 841 aa8.13□□□□□ -1.11
CACNA1C-223ENST00000465278 FRRS1LQ9P0K9 344 aa8.13□□□□□ -1.11
CACNA1C-223ENST00000465278 UACAQ9BZF9 1416 aa8.12□□□□□ -1.11
CACNA1C-223ENST00000465278 USP17L7P0C7H9 530 aa8.12□□□□□ -1.11
CACNA1C-223ENST00000465278 AFF1P51825 1210 aaKnown RBP8.12□□□□□ -1.11
CACNA1C-223ENST00000465278 GRIK5Q16478 980 aa8.12□□□□□ -1.11
CACNA1C-223ENST00000465278 DTHD1Q6ZMT9 781 aa8.12□□□□□ -1.11
CACNA1C-223ENST00000465278 BCL11AQ9H165 835 aa8.12□□□□□ -1.11
CACNA1C-223ENST00000465278 MUC3BQ9H195 1237 aa8.12□□□□□ -1.11
CACNA1C-223ENST00000465278 TRAK1Q9UPV9 953 aa8.12□□□□□ -1.11
CACNA1C-223ENST00000465278 POLR1AO95602 1720 aaPredicted RBP8.12□□□□□ -1.11
CACNA1C-223ENST00000465278 CTSHP09668 335 aa8.11□□□□□ -1.11
CACNA1C-223ENST00000465278 MRPL58Q14197 206 aaKnown RBP8.11□□□□□ -1.11
CACNA1C-223ENST00000465278 TTC9Q92623 222 aa8.11□□□□□ -1.11
CACNA1C-223ENST00000465278 BHLHE41Q9C0J9 482 aaPredicted RBP8.11□□□□□ -1.11
CACNA1C-223ENST00000465278 ABCB6Q9NP58 842 aa8.11□□□□□ -1.11
CACNA1C-223ENST00000465278 ENAMQ9NRM1 1142 aa8.11□□□□□ -1.11
CACNA1C-223ENST00000465278 EFCAB5A4FU69 1503 aa8.1□□□□□ -1.11
CACNA1C-223ENST00000465278 ZMYM4Q5VZL5 1548 aa8.1□□□□□ -1.11
CACNA1C-223ENST00000465278 WIPF1O43516 503 aa8.1□□□□□ -1.11
CACNA1C-223ENST00000465278 PTPRAP18433 802 aa8.1□□□□□ -1.11
CACNA1C-223ENST00000465278 CDC27P30260 824 aa8.1□□□□□ -1.11
CACNA1C-223ENST00000465278 ZNF157P51786 506 aaPredicted RBP8.1□□□□□ -1.11
CACNA1C-223ENST00000465278 DMRTC2Q8IXT2 367 aaPredicted RBP8.1□□□□□ -1.11
CACNA1C-223ENST00000465278 TMEM87AQ8NBN3 555 aa8.1□□□□□ -1.11
CACNA1C-223ENST00000465278 BSNDQ8WZ55 320 aa8.1□□□□□ -1.11
CACNA1C-223ENST00000465278 LRRC4BQ9NT99 713 aa8.1□□□□□ -1.11
CACNA1C-223ENST00000465278 FAM8A1Q9UBU6 413 aa8.1□□□□□ -1.11
CACNA1C-223ENST00000465278 PLA2R1Q13018 1463 aa8.09□□□□□ -1.11
CACNA1C-223ENST00000465278 ARHGEF15O94989 841 aa8.09□□□□□ -1.11
CACNA1C-223ENST00000465278 RAPGEF3O95398 923 aa8.09□□□□□ -1.11
CACNA1C-223ENST00000465278 LORP23490 312 aaPredicted RBP8.09□□□□□ -1.11
CACNA1C-223ENST00000465278 BAG6P46379 1132 aa8.09□□□□□ -1.11
CACNA1C-223ENST00000465278 SNRPNP63162 240 aaKnown RBP8.09□□□□□ -1.11
CACNA1C-223ENST00000465278 LDLRAD1Q5T700 205 aa8.09□□□□□ -1.11
CACNA1C-223ENST00000465278 MEI1Q5TIA1 1274 aa8.09□□□□□ -1.11
CACNA1C-223ENST00000465278 KANK3Q6NY19 840 aa8.09□□□□□ -1.11
CACNA1C-223ENST00000465278 TXNDC11Q6PKC3 985 aa8.09□□□□□ -1.11
CACNA1C-223ENST00000465278 ADAM19Q9H013 955 aa8.09□□□□□ -1.11
CACNA1C-223ENST00000465278 AKNAQ7Z591 1439 aa8.09□□□□□ -1.11
CACNA1C-223ENST00000465278 TNIKQ9UKE5 1360 aa8.09□□□□□ -1.12
CACNA1C-223ENST00000465278 TCOF1Q13428 1488 aaKnown RBP8.08□□□□□ -1.12
CACNA1C-223ENST00000465278 NEO1Q92859 1461 aa8.08□□□□□ -1.12
CACNA1C-223ENST00000465278 ABCA9Q8IUA7 1624 aa8.08□□□□□ -1.12
CACNA1C-223ENST00000465278 LINC01387J3KSC0 135 aa8.08□□□□□ -1.12
CACNA1C-223ENST00000465278 FBXO24O75426 580 aa8.08□□□□□ -1.12
CACNA1C-223ENST00000465278 HOXB4P17483 251 aaPredicted RBP8.08□□□□□ -1.12
CACNA1C-223ENST00000465278 GSTT1P30711 240 aa8.08□□□□□ -1.12
CACNA1C-223ENST00000465278 CEBPAP49715 358 aaPredicted RBP8.08□□□□□ -1.12
CACNA1C-223ENST00000465278 PRPF40BQ6NWY9 871 aaKnown RBP8.08□□□□□ -1.12
CACNA1C-223ENST00000465278 ZSCAN1Q8NBB4 408 aa8.08□□□□□ -1.12
CACNA1C-223ENST00000465278 C3orf58Q8NDZ4 430 aa8.08□□□□□ -1.12
CACNA1C-223ENST00000465278 SRCIN1Q9C0H9 1055 aa8.08□□□□□ -1.12
CACNA1C-223ENST00000465278 ZFYVE16Q7Z3T8 1539 aa8.08□□□□□ -1.12
CACNA1C-223ENST00000465278 FAM177BA6PVY3 158 aa8.07□□□□□ -1.12
CACNA1C-223ENST00000465278 EPHA1P21709 976 aa8.07□□□□□ -1.12
CACNA1C-223ENST00000465278 COL9A3Q14050 684 aaPredicted RBP8.07□□□□□ -1.12
CACNA1C-223ENST00000465278 HGSNATQ68CP4 663 aa8.07□□□□□ -1.12
CACNA1C-223ENST00000465278 MSL1Q68DK7 614 aa8.07□□□□□ -1.12
CACNA1C-223ENST00000465278 VN1R5Q7Z5H4 357 aa8.07□□□□□ -1.12
CACNA1C-223ENST00000465278 WFDC8Q8IUA0 241 aa8.07□□□□□ -1.12
CACNA1C-223ENST00000465278 SOX13Q9UN79 622 aa8.07□□□□□ -1.12
CACNA1C-223ENST00000465278 PPME1Q9Y570 386 aa8.07□□□□□ -1.12
CACNA1C-223ENST00000465278 SYNMO15061 1565 aa8.06□□□□□ -1.12
CACNA1C-223ENST00000465278 ZNF423Q2M1K9 1284 aa8.06□□□□□ -1.12
CACNA1C-223ENST00000465278 TRAPPC3LQ5T215 181 aa8.06□□□□□ -1.12
CACNA1C-223ENST00000465278 C9orf131Q5VYM1 1079 aa8.06□□□□□ -1.12
CACNA1C-223ENST00000465278 TPTE2Q6XPS3 522 aa8.06□□□□□ -1.12
CACNA1C-223ENST00000465278 TTBK1Q5TCY1 1321 aaPredicted RBP8.05□□□□□ -1.12
CACNA1C-223ENST00000465278 SOX1O00570 391 aaPredicted RBP8.05□□□□□ -1.12
CACNA1C-223ENST00000465278 RECKO95980 971 aa8.05□□□□□ -1.12
CACNA1C-223ENST00000465278 ITPKAP23677 461 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms