RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 RCAN3Q9UKA8 241 aa15.1■□□□□ 0.01
XRN1-204ENST00000465074 AOX1Q06278 1338 aa15.1■□□□□ 0.01
XRN1-204ENST00000465074 PHKA1P46020 1223 aa15.09■□□□□ 0.01
XRN1-204ENST00000465074 CRKP46108 304 aa15.09■□□□□ 0.01
XRN1-204ENST00000465074 MTMR14Q8NCE2 650 aa15.09■□□□□ 0.01
XRN1-204ENST00000465074 HHIPL1Q96JK4 782 aa15.09■□□□□ 0.01
XRN1-204ENST00000465074 YTHDC1Q96MU7 727 aaKnown RBP15.09■□□□□ 0.01
XRN1-204ENST00000465074 WBP1LQ9NX94 342 aa15.09■□□□□ 0.01
XRN1-204ENST00000465074 FZD1Q9UP38 647 aa15.09■□□□□ 0.01
XRN1-204ENST00000465074 AKAP2Q9Y2D5 859 aa15.09■□□□□ 0.01
XRN1-204ENST00000465074 A0A1B0GUL7 405 aa15.08■□□□□ 0
XRN1-204ENST00000465074 TCP10L2B9ZVM9 353 aa15.08■□□□□ 0
XRN1-204ENST00000465074 ZBTB7BO15156 539 aaPredicted RBP15.08■□□□□ 0
XRN1-204ENST00000465074 MS4A1P11836 297 aa15.08■□□□□ 0
XRN1-204ENST00000465074 MAP2K2P36507 400 aa15.08■□□□□ 0
XRN1-204ENST00000465074 CTCFP49711 727 aaPredicted RBP15.08■□□□□ 0
XRN1-204ENST00000465074 POTEHQ6S545 545 aa15.08■□□□□ 0
XRN1-204ENST00000465074 WDR66Q8TBY9 1149 aa15.08■□□□□ 0
XRN1-204ENST00000465074 TEKT1Q969V4 418 aa15.08■□□□□ 0
XRN1-204ENST00000465074 ZIC5Q96T25 663 aa15.08■□□□□ 0
XRN1-204ENST00000465074 ZNF70Q9UC06 446 aaPredicted RBP15.08■□□□□ 0
XRN1-204ENST00000465074 TSKSQ9UJT2 592 aa15.08■□□□□ 0
XRN1-204ENST00000465074 SERPINA10Q9UK55 444 aa15.08■□□□□ 0
XRN1-204ENST00000465074 SURF6O75683 361 aaKnown RBP15.07■□□□□ 0
XRN1-204ENST00000465074 LBX1P52954 281 aa15.07■□□□□ 0
XRN1-204ENST00000465074 ATP8B2P98198 1209 aa15.07■□□□□ 0
XRN1-204ENST00000465074 NOGQ13253 232 aa15.07■□□□□ 0
XRN1-204ENST00000465074 CCDC102BQ68D86 513 aa15.07■□□□□ 0
XRN1-204ENST00000465074 CCDC102AQ96A19 550 aa15.07■□□□□ 0
XRN1-204ENST00000465074 XAGE2Q96GT9 111 aa15.07■□□□□ 0
XRN1-204ENST00000465074 BCL11AQ9H165 835 aa15.07■□□□□ 0
XRN1-204ENST00000465074 COG6Q9Y2V7 657 aa15.07■□□□□ 0
XRN1-204ENST00000465074 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.07■□□□□ 0
XRN1-204ENST00000465074 PAPPA2Q9BXP8 1791 aa15.06■□□□□ 0
XRN1-204ENST00000465074 CACNB3P54284 484 aa15.06■□□□□ 0
XRN1-204ENST00000465074 FKBP1BP68106 108 aa15.06■□□□□ 0
XRN1-204ENST00000465074 KIF23Q02241 960 aaPredicted RBP15.06■□□□□ 0
XRN1-204ENST00000465074 MKRN3Q13064 507 aaKnown RBP15.06■□□□□ 0
XRN1-204ENST00000465074 RASA3Q14644 834 aa15.06■□□□□ 0
XRN1-204ENST00000465074 ARMC9Q7Z3E5 817 aa15.06■□□□□ 0
XRN1-204ENST00000465074 DENND2AQ9ULE3 1009 aa15.06■□□□□ 0
XRN1-204ENST00000465074 ANGEL1Q9UNK9 670 aaKnown RBP15.06■□□□□ 0
XRN1-204ENST00000465074 LDHBP07195 334 aaKnown RBP15.05■□□□□ -0
XRN1-204ENST00000465074 MVPQ14764 893 aaKnown RBP15.05■□□□□ -0
XRN1-204ENST00000465074 SPDYE2Q495Y8 402 aa15.05■□□□□ -0
XRN1-204ENST00000465074 NBPF12Q5TAG4 269 aaPredicted RBP15.05■□□□□ -0
XRN1-204ENST00000465074 ABCF2Q9UG63 623 aa15.05■□□□□ -0
XRN1-204ENST00000465074 MAST3O60307 1309 aa15.05■□□□□ -0
XRN1-204ENST00000465074 THSD7BQ9C0I4 1608 aa15.04■□□□□ -0
XRN1-204ENST00000465074 COL1A1P02452 1464 aaPredicted RBP15.04■□□□□ -0
XRN1-204ENST00000465074 FAM155AB1AL88 458 aaPredicted RBP15.04■□□□□ -0
XRN1-204ENST00000465074 TNNI2P48788 182 aa15.04■□□□□ -0
XRN1-204ENST00000465074 TNFAIP1Q13829 316 aa15.04■□□□□ -0
XRN1-204ENST00000465074 POLA2Q14181 598 aa15.04■□□□□ -0
XRN1-204ENST00000465074 DIXDC1Q155Q3 683 aa15.04■□□□□ -0
XRN1-204ENST00000465074 SUPT20HL1Q3ZLR7 823 aa15.04■□□□□ -0
XRN1-204ENST00000465074 TNS4Q8IZW8 715 aa15.04■□□□□ -0
XRN1-204ENST00000465074 TMOD2Q9NZR1 351 aa15.04■□□□□ -0
XRN1-204ENST00000465074 SEMA3EO15041 775 aa15.03■□□□□ -0
XRN1-204ENST00000465074 PPP1R12BO60237 982 aaPredicted RBP15.03■□□□□ -0
XRN1-204ENST00000465074 SLC10A3P09131 477 aa15.03■□□□□ -0
XRN1-204ENST00000465074 HSPA8P11142 646 aaKnown RBP15.03■□□□□ -0
XRN1-204ENST00000465074 PRDX5P30044 214 aa15.03■□□□□ -0
XRN1-204ENST00000465074 HDLBPQ00341 1268 aaKnown RBP15.03■□□□□ -0
XRN1-204ENST00000465074 RASAL3Q86YV0 1011 aa15.03■□□□□ -0
XRN1-204ENST00000465074 SSH3Q8TE77 659 aa15.03■□□□□ -0
XRN1-204ENST00000465074 SUGT1Q9Y2Z0 365 aa15.03■□□□□ -0
XRN1-204ENST00000465074 PPP2R3BQ9Y5P8 575 aa15.03■□□□□ -0
XRN1-204ENST00000465074 APBB1O00213 710 aa15.02■□□□□ -0
XRN1-204ENST00000465074 RASGRF1Q13972 1273 aa15.02■□□□□ -0
XRN1-204ENST00000465074 CEP85Q6P2H3 762 aa15.02■□□□□ -0
XRN1-204ENST00000465074 DZIP1Q86YF9 867 aaKnown RBP15.02■□□□□ -0
XRN1-204ENST00000465074 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.02■□□□□ -0
XRN1-204ENST00000465074 SLC10A4Q96EP9 437 aa15.02■□□□□ -0
XRN1-204ENST00000465074 ZDHHC15Q96MV8 337 aa15.02■□□□□ -0
XRN1-204ENST00000465074 TMEM39BQ9GZU3 492 aa15.02■□□□□ -0
XRN1-204ENST00000465074 AK9Q5TCS8 1911 aa15.02□□□□□ -0.01
XRN1-204ENST00000465074 CAPN15O75808 1086 aa15.01□□□□□ -0.01
XRN1-204ENST00000465074 TTC39AQ5SRH9 613 aa15.01□□□□□ -0.01
XRN1-204ENST00000465074 APOBEC3HQ6NTF7 200 aaKnown RBP15.01□□□□□ -0.01
XRN1-204ENST00000465074 HHIPL2Q6UWX4 724 aa15.01□□□□□ -0.01
XRN1-204ENST00000465074 CDAN1Q8IWY9 1227 aa15.01□□□□□ -0.01
XRN1-204ENST00000465074 ZGPATQ8N5A5 531 aaKnown RBP15.01□□□□□ -0.01
XRN1-204ENST00000465074 DDX19BQ9UMR2 479 aa15.01□□□□□ -0.01
XRN1-204ENST00000465074 EXOC6BQ9Y2D4 811 aa15.01□□□□□ -0.01
XRN1-204ENST00000465074 AKAP11Q9UKA4 1901 aa15.01□□□□□ -0.01
XRN1-204ENST00000465074 MYH2Q9UKX2 1941 aa15.01□□□□□ -0.01
XRN1-204ENST00000465074 TRPA1O75762 1119 aa15□□□□□ -0.01
XRN1-204ENST00000465074 TCP10Q12799 353 aa15□□□□□ -0.01
XRN1-204ENST00000465074 TNNI3KQ59H18 835 aa15□□□□□ -0.01
XRN1-204ENST00000465074 C20orf194Q5TEA3 1177 aa15□□□□□ -0.01
XRN1-204ENST00000465074 SPTY2D1Q68D10 685 aaPredicted RBP15□□□□□ -0.01
XRN1-204ENST00000465074 PI16Q6UXB8 463 aa15□□□□□ -0.01
XRN1-204ENST00000465074 CLMNQ96JQ2 1002 aa15□□□□□ -0.01
XRN1-204ENST00000465074 CSRNP1Q96S65 589 aa15□□□□□ -0.01
XRN1-204ENST00000465074 SNRKQ9NRH2 765 aa15□□□□□ -0.01
XRN1-204ENST00000465074 HMG20BQ9P0W2 317 aa15□□□□□ -0.01
XRN1-204ENST00000465074 DAGLAQ9Y4D2 1042 aa15□□□□□ -0.01
XRN1-204ENST00000465074 FPGT-TNNI3KV9GXZ4 949 aa15□□□□□ -0.01
XRN1-204ENST00000465074 SSC5DA1L4H1 1573 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms