RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 VGLL2Q8N8G2 317 aa28.59■■■□□ 2.17
USP42-205ENST00000465073 HDLBPQ00341 1268 aaKnown RBP28.59■■■□□ 2.17
USP42-205ENST00000465073 SLFN5Q08AF3 891 aa28.59■■■□□ 2.17
USP42-205ENST00000465073 IQSEC3Q9UPP2 1182 aaPredicted RBP28.59■■■□□ 2.17
USP42-205ENST00000465073 IGF2BP3O00425 579 aaKnown RBP eCLIP28.58■■■□□ 2.17
USP42-205ENST00000465073 TNNI2P48788 182 aa28.58■■■□□ 2.17
USP42-205ENST00000465073 CHAF1AQ13111 956 aaPredicted RBP28.58■■■□□ 2.17
USP42-205ENST00000465073 OTUD7BQ6GQQ9 843 aa28.58■■■□□ 2.17
USP42-205ENST00000465073 TEPSINQ96N21 525 aa28.58■■■□□ 2.17
USP42-205ENST00000465073 TCP10L2B9ZVM9 353 aa28.56■■■□□ 2.16
USP42-205ENST00000465073 GJA5P36382 358 aa28.56■■■□□ 2.16
USP42-205ENST00000465073 ALDH1L2Q3SY69 923 aa28.56■■■□□ 2.16
USP42-205ENST00000465073 KLHDC4Q8TBB5 520 aa28.56■■■□□ 2.16
USP42-205ENST00000465073 TNRC18O15417 2968 aaPredicted RBP28.55■■■□□ 2.16
USP42-205ENST00000465073 BCAMP50895 628 aa28.55■■■□□ 2.16
USP42-205ENST00000465073 GRIK5Q16478 980 aa28.55■■■□□ 2.16
USP42-205ENST00000465073 MRIQ9BWK5 157 aa28.55■■■□□ 2.16
USP42-205ENST00000465073 KIF16BQ96L93 1317 aa28.55■■■□□ 2.16
USP42-205ENST00000465073 TESPA1A2RU30 521 aaPredicted RBP28.54■■■□□ 2.16
USP42-205ENST00000465073 PUM3Q15397 648 aaKnown RBP28.54■■■□□ 2.16
USP42-205ENST00000465073 TEKT1Q969V4 418 aa28.54■■■□□ 2.16
USP42-205ENST00000465073 IFIT1P09914 478 aaKnown RBP28.53■■■□□ 2.16
USP42-205ENST00000465073 TMEM39BQ9GZU3 492 aa28.53■■■□□ 2.16
USP42-205ENST00000465073 ELP3Q9H9T3 547 aa28.53■■■□□ 2.16
USP42-205ENST00000465073 SUGT1Q9Y2Z0 365 aa28.53■■■□□ 2.16
USP42-205ENST00000465073 ARAP2Q8WZ64 1704 aa28.53■■■□□ 2.16
USP42-205ENST00000465073 PDE4DIPQ5VU43 2346 aa28.53■■■□□ 2.16
USP42-205ENST00000465073 FGFR2P21802 821 aa28.53■■■□□ 2.16
USP42-205ENST00000465073 CDAN1Q8IWY9 1227 aa28.53■■■□□ 2.16
USP42-205ENST00000465073 OPTNQ96CV9 577 aa28.53■■■□□ 2.16
USP42-205ENST00000465073 SLC34A2O95436 690 aa28.52■■■□□ 2.16
USP42-205ENST00000465073 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.52■■■□□ 2.16
USP42-205ENST00000465073 ZDHHC15Q96MV8 337 aa28.52■■■□□ 2.16
USP42-205ENST00000465073 EYA2O00167 538 aa28.51■■■□□ 2.15
USP42-205ENST00000465073 MAP3K9P80192 1104 aa28.51■■■□□ 2.15
USP42-205ENST00000465073 SMC4Q9NTJ3 1288 aa28.51■■■□□ 2.15
USP42-205ENST00000465073 MAST3O60307 1309 aa28.51■■■□□ 2.15
USP42-205ENST00000465073 LAMB1P07942 1786 aa28.5■■■□□ 2.15
USP42-205ENST00000465073 RFX5P48382 616 aaPredicted RBP28.5■■■□□ 2.15
USP42-205ENST00000465073 CRHR2Q13324 411 aa28.5■■■□□ 2.15
USP42-205ENST00000465073 PTPN18Q99952 460 aa28.5■■■□□ 2.15
USP42-205ENST00000465073 TRIM17Q9Y577 477 aa28.5■■■□□ 2.15
USP42-205ENST00000465073 ERO1AQ96HE7 468 aa28.49■■■□□ 2.15
USP42-205ENST00000465073 MS4A4AQ96JQ5 239 aa28.49■■■□□ 2.15
USP42-205ENST00000465073 TMOD2Q9NZR1 351 aa28.49■■■□□ 2.15
USP42-205ENST00000465073 SLC5A1P13866 664 aa28.48■■■□□ 2.15
USP42-205ENST00000465073 VGLL4Q14135 290 aa28.48■■■□□ 2.15
USP42-205ENST00000465073 FKBP1CQ5VVH2 108 aa28.48■■■□□ 2.15
USP42-205ENST00000465073 OTOP1Q7RTM1 612 aa28.48■■■□□ 2.15
USP42-205ENST00000465073 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.48■■■□□ 2.15
USP42-205ENST00000465073 LPIN2Q92539 896 aa28.48■■■□□ 2.15
USP42-205ENST00000465073 CDCA7LQ96GN5 454 aa28.48■■■□□ 2.15
USP42-205ENST00000465073 CSADQ9Y600 493 aa28.48■■■□□ 2.15
USP42-205ENST00000465073 HHIPL2Q6UWX4 724 aa28.47■■■□□ 2.15
USP42-205ENST00000465073 GTF2A2P52657 109 aa28.46■■■□□ 2.15
USP42-205ENST00000465073 CACNB3P54284 484 aa28.46■■■□□ 2.15
USP42-205ENST00000465073 APOBEC3HQ6NTF7 200 aaKnown RBP28.46■■■□□ 2.15
USP42-205ENST00000465073 FAM83AQ86UY5 434 aa28.46■■■□□ 2.15
USP42-205ENST00000465073 TRMT2AQ8IZ69 625 aaKnown RBP28.46■■■□□ 2.15
USP42-205ENST00000465073 WDR66Q8TBY9 1149 aa28.46■■■□□ 2.15
USP42-205ENST00000465073 HOOK2Q96ED9 719 aa28.46■■■□□ 2.15
USP42-205ENST00000465073 CT47B1P0C2W7 299 aaPredicted RBP28.46■■■□□ 2.15
USP42-205ENST00000465073 FBXO3Q9UK99 471 aa28.46■■■□□ 2.15
USP42-205ENST00000465073 UBTFL1P0CB47 393 aaPredicted RBP28.45■■■□□ 2.14
USP42-205ENST00000465073 ATG9AQ7Z3C6 839 aa28.45■■■□□ 2.14
USP42-205ENST00000465073 CNKSR2Q8WXI2 1034 aa28.45■■■□□ 2.14
USP42-205ENST00000465073 SP3Q02447 781 aa28.44■■■□□ 2.14
USP42-205ENST00000465073 BRI3BPQ8WY22 251 aa28.44■■■□□ 2.14
USP42-205ENST00000465073 HDAC5Q9UQL6 1122 aa28.44■■■□□ 2.14
USP42-205ENST00000465073 OTOFQ9HC10 1997 aa28.44■■■□□ 2.14
USP42-205ENST00000465073 CIAO1O76071 339 aa28.43■■■□□ 2.14
USP42-205ENST00000465073 INTS3Q68E01 1043 aaKnown RBP28.43■■■□□ 2.14
USP42-205ENST00000465073 CD99L2Q8TCZ2 262 aa28.43■■■□□ 2.14
USP42-205ENST00000465073 CCL15-CCL14A0A0B4J2E2 113 aa28.42■■■□□ 2.14
USP42-205ENST00000465073 CCL15Q16663 113 aa28.42■■■□□ 2.14
USP42-205ENST00000465073 OTUD5Q96G74 571 aa28.42■■■□□ 2.14
USP42-205ENST00000465073 SPDYE5A6NIY4 337 aa28.41■■■□□ 2.14
USP42-205ENST00000465073 EFCC1Q9HA90 598 aa28.41■■■□□ 2.14
USP42-205ENST00000465073 CEP126Q9P2H0 1117 aa28.41■■■□□ 2.14
USP42-205ENST00000465073 NOB1Q9ULX3 412 aaKnown RBP28.41■■■□□ 2.14
USP42-205ENST00000465073 PTPN22Q9Y2R2 807 aa28.41■■■□□ 2.14
USP42-205ENST00000465073 ERO1BQ86YB8 467 aa28.4■■■□□ 2.14
USP42-205ENST00000465073 WRNIP1Q96S55 665 aa28.4■■■□□ 2.14
USP42-205ENST00000465073 API5Q9BZZ5 524 aaKnown RBP28.4■■■□□ 2.14
USP42-205ENST00000465073 ZFYVE28Q9HCC9 887 aa28.4■■■□□ 2.14
USP42-205ENST00000465073 TAF1CQ15572 869 aaPredicted RBP28.4■■■□□ 2.14
USP42-205ENST00000465073 ATP2B3Q16720 1220 aa28.4■■■□□ 2.14
USP42-205ENST00000465073 PRPF38BQ5VTL8 546 aaKnown RBP28.4■■■□□ 2.14
USP42-205ENST00000465073 DCAF15Q66K64 600 aa28.4■■■□□ 2.14
USP42-205ENST00000465073 SIL1Q9H173 461 aa28.4■■■□□ 2.14
USP42-205ENST00000465073 GNL3LQ9NVN8 582 aaKnown RBP28.4■■■□□ 2.14
USP42-205ENST00000465073 SNCAIPQ9Y6H5 919 aa28.4■■■□□ 2.14
USP42-205ENST00000465073 RPAP1Q9BWH6 1393 aaPredicted RBP28.38■■■□□ 2.13
USP42-205ENST00000465073 CETPP11597 493 aa28.38■■■□□ 2.13
USP42-205ENST00000465073 ARHGEF6Q15052 776 aa28.38■■■□□ 2.13
USP42-205ENST00000465073 WDHD1O75717 1129 aaPredicted RBP28.37■■■□□ 2.13
USP42-205ENST00000465073 FAM43AQ8N2R8 423 aa28.37■■■□□ 2.13
USP42-205ENST00000465073 ZKSCAN4Q969J2 545 aaPredicted RBP28.37■■■□□ 2.13
USP42-205ENST00000465073 IL15P40933 162 aaPredicted RBP28.36■■■□□ 2.13
USP42-205ENST00000465073 FAM151AQ8WW52 585 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms