RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 TJP1Q07157 1748 aa7.44□□□□□ -1.22
CMTM1-207ENST00000465057 A6NJR5 290 aa7.43□□□□□ -1.22
CMTM1-207ENST00000465057 USP17L5A8MUK1 530 aa7.43□□□□□ -1.22
CMTM1-207ENST00000465057 TMEM229AB2RXF0 380 aa7.43□□□□□ -1.22
CMTM1-207ENST00000465057 PHKG2P15735 406 aa7.43□□□□□ -1.22
CMTM1-207ENST00000465057 YBX3P16989 372 aaKnown RBP eCLIP7.43□□□□□ -1.22
CMTM1-207ENST00000465057 PHKA2P46019 1235 aa7.43□□□□□ -1.22
CMTM1-207ENST00000465057 LINC00116Q8NCU8 138 aa7.43□□□□□ -1.22
CMTM1-207ENST00000465057 RHBDD1Q8TEB9 315 aa7.43□□□□□ -1.22
CMTM1-207ENST00000465057 SLC4A9Q96Q91 983 aa7.43□□□□□ -1.22
CMTM1-207ENST00000465057 UCN2Q96RP3 112 aa7.43□□□□□ -1.22
CMTM1-207ENST00000465057 SPG7Q9UQ90 795 aa7.43□□□□□ -1.22
CMTM1-207ENST00000465057 BRCA1P38398 1863 aaKnown RBP7.43□□□□□ -1.22
CMTM1-207ENST00000465057 CEP350Q5VT06 3117 aa7.42□□□□□ -1.22
CMTM1-207ENST00000465057 A0A1B0GTH6 734 aa7.42□□□□□ -1.22
CMTM1-207ENST00000465057 ANP32AP39687 249 aaKnown RBP7.42□□□□□ -1.22
CMTM1-207ENST00000465057 SMTNP53814 917 aa7.42□□□□□ -1.22
CMTM1-207ENST00000465057 TBC1D9Q6ZT07 1266 aa7.42□□□□□ -1.22
CMTM1-207ENST00000465057 IFNL2Q8IZJ0 200 aa7.42□□□□□ -1.22
CMTM1-207ENST00000465057 SMARCC1Q92922 1105 aaPredicted RBP7.42□□□□□ -1.22
CMTM1-207ENST00000465057 PANK3Q9H999 370 aa7.42□□□□□ -1.22
CMTM1-207ENST00000465057 TMOD3Q9NYL9 352 aa7.42□□□□□ -1.22
CMTM1-207ENST00000465057 WWC3Q9ULE0 1092 aa7.42□□□□□ -1.22
CMTM1-207ENST00000465057 ASAP1Q9ULH1 1129 aa7.42□□□□□ -1.22
CMTM1-207ENST00000465057 KDM6AO15550 1401 aaPredicted RBP7.42□□□□□ -1.22
CMTM1-207ENST00000465057 CICQ96RK0 1608 aaPredicted RBP7.41□□□□□ -1.22
CMTM1-207ENST00000465057 LOC102724428A0A0B4J2F2 783 aa7.41□□□□□ -1.22
CMTM1-207ENST00000465057 ATP9BO43861 1147 aa7.41□□□□□ -1.22
CMTM1-207ENST00000465057 SLURP2P0DP57 97 aa7.41□□□□□ -1.22
CMTM1-207ENST00000465057 SIK1P57059 783 aa7.41□□□□□ -1.22
CMTM1-207ENST00000465057 GTF2IP78347 998 aa7.41□□□□□ -1.22
CMTM1-207ENST00000465057 ITPK1Q13572 414 aa7.41□□□□□ -1.22
CMTM1-207ENST00000465057 GAS6Q14393 721 aa7.41□□□□□ -1.22
CMTM1-207ENST00000465057 FOXR1Q6PIV2 292 aa7.41□□□□□ -1.22
CMTM1-207ENST00000465057 PLEKHM2Q8IWE5 1019 aa7.41□□□□□ -1.22
CMTM1-207ENST00000465057 DEPDC4Q8N2C3 294 aa7.41□□□□□ -1.22
CMTM1-207ENST00000465057 SERTAD1Q9UHV2 236 aa7.41□□□□□ -1.22
CMTM1-207ENST00000465057 NOP58Q9Y2X3 529 aaKnown RBP7.41□□□□□ -1.22
CMTM1-207ENST00000465057 IGSF1Q8N6C5 1336 aa7.41□□□□□ -1.22
CMTM1-207ENST00000465057 KDRP35968 1356 aa7.41□□□□□ -1.22
CMTM1-207ENST00000465057 MTFR1Q15390 333 aa7.4□□□□□ -1.22
CMTM1-207ENST00000465057 AEBP1Q8IUX7 1158 aa7.4□□□□□ -1.22
CMTM1-207ENST00000465057 FLAD1Q8NFF5 587 aa7.4□□□□□ -1.22
CMTM1-207ENST00000465057 GTPBP3Q969Y2 492 aaKnown RBP7.4□□□□□ -1.22
CMTM1-207ENST00000465057 NUCKS1Q9H1E3 243 aaKnown RBP7.4□□□□□ -1.22
CMTM1-207ENST00000465057 ATG3Q9NT62 314 aa7.4□□□□□ -1.22
CMTM1-207ENST00000465057 ADAMTS7Q9UKP4 1686 aa7.39□□□□□ -1.23
CMTM1-207ENST00000465057 GPR25O00155 361 aa7.39□□□□□ -1.23
CMTM1-207ENST00000465057 CDK2AP1O14519 115 aa7.39□□□□□ -1.23
CMTM1-207ENST00000465057 BACH1O14867 736 aa7.39□□□□□ -1.23
CMTM1-207ENST00000465057 THBS1P07996 1170 aa7.39□□□□□ -1.23
CMTM1-207ENST00000465057 SSFA2P28290 1259 aa7.39□□□□□ -1.23
CMTM1-207ENST00000465057 SRSF11Q05519 484 aaKnown RBP7.39□□□□□ -1.23
CMTM1-207ENST00000465057 ZNF530Q6P9A1 599 aaPredicted RBP7.39□□□□□ -1.23
CMTM1-207ENST00000465057 GLMNQ92990 594 aa7.39□□□□□ -1.23
CMTM1-207ENST00000465057 NIFKQ9BYG3 293 aaKnown RBP7.39□□□□□ -1.23
CMTM1-207ENST00000465057 GPAMQ9HCL2 828 aa7.39□□□□□ -1.23
CMTM1-207ENST00000465057 PPP4R2Q9NY27 417 aa7.39□□□□□ -1.23
CMTM1-207ENST00000465057 AFDNP55196 1824 aaKnown RBP7.38□□□□□ -1.23
CMTM1-207ENST00000465057 ARFGEF1Q9Y6D6 1849 aa7.38□□□□□ -1.23
CMTM1-207ENST00000465057 UBR2Q8IWV8 1755 aa7.38□□□□□ -1.23
CMTM1-207ENST00000465057 ATP10DQ9P241 1426 aa7.38□□□□□ -1.23
CMTM1-207ENST00000465057 USP17L3A6NCW0 530 aa7.38□□□□□ -1.23
CMTM1-207ENST00000465057 USP17L4A6NCW7 530 aa7.38□□□□□ -1.23
CMTM1-207ENST00000465057 A6NJY4 79 aa7.38□□□□□ -1.23
CMTM1-207ENST00000465057 ZBTB7BO15156 539 aaPredicted RBP7.38□□□□□ -1.23
CMTM1-207ENST00000465057 MSX1P28360 303 aa7.38□□□□□ -1.23
CMTM1-207ENST00000465057 C1QTNF8P60827 252 aa7.38□□□□□ -1.23
CMTM1-207ENST00000465057 LBRQ14739 615 aaKnown RBP7.38□□□□□ -1.23
CMTM1-207ENST00000465057 ZNF385CQ66K41 422 aaPredicted RBP7.38□□□□□ -1.23
CMTM1-207ENST00000465057 USP17L2Q6R6M4 530 aa7.38□□□□□ -1.23
CMTM1-207ENST00000465057 USP17L1Q7RTZ2 530 aa7.38□□□□□ -1.23
CMTM1-207ENST00000465057 MORC1Q86VD1 984 aa7.38□□□□□ -1.23
CMTM1-207ENST00000465057 TRIM50Q86XT4 487 aa7.38□□□□□ -1.23
CMTM1-207ENST00000465057 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.38□□□□□ -1.23
CMTM1-207ENST00000465057 TRERF1Q96PN7 1200 aa7.38□□□□□ -1.23
CMTM1-207ENST00000465057 MBIPQ9NS73 344 aa7.38□□□□□ -1.23
CMTM1-207ENST00000465057 IQSEC3Q9UPP2 1182 aaPredicted RBP7.38□□□□□ -1.23
CMTM1-207ENST00000465057 CD2APQ9Y5K6 639 aa7.38□□□□□ -1.23
CMTM1-207ENST00000465057 GRIN3BO60391 1043 aa7.37□□□□□ -1.23
CMTM1-207ENST00000465057 PLA2G4AP47712 749 aa7.37□□□□□ -1.23
CMTM1-207ENST00000465057 ATP1A2P50993 1020 aa7.37□□□□□ -1.23
CMTM1-207ENST00000465057 GLIPR1L2Q4G1C9 344 aa7.37□□□□□ -1.23
CMTM1-207ENST00000465057 PLEKHO1Q53GL0 409 aaPredicted RBP7.37□□□□□ -1.23
CMTM1-207ENST00000465057 SULT6B1Q6IMI4 303 aa7.37□□□□□ -1.23
CMTM1-207ENST00000465057 ZNF295-AS1Q8N0V1 137 aa7.37□□□□□ -1.23
CMTM1-207ENST00000465057 ZNF358Q9NW07 568 aa7.37□□□□□ -1.23
CMTM1-207ENST00000465057 SIPA1L3O60292 1781 aaPredicted RBP7.37□□□□□ -1.23
CMTM1-207ENST00000465057 PXDNLA1KZ92 1463 aa7.36□□□□□ -1.23
CMTM1-207ENST00000465057 KIF7Q2M1P5 1343 aa7.36□□□□□ -1.23
CMTM1-207ENST00000465057 ERVV-2B6SEH9 535 aa7.36□□□□□ -1.23
CMTM1-207ENST00000465057 CABP4P57796 275 aa7.36□□□□□ -1.23
CMTM1-207ENST00000465057 PGBD3Q8N328 593 aa7.36□□□□□ -1.23
CMTM1-207ENST00000465057 WHAMMQ8TF30 809 aa7.36□□□□□ -1.23
CMTM1-207ENST00000465057 ZNF526Q8TF50 670 aaPredicted RBP7.36□□□□□ -1.23
CMTM1-207ENST00000465057 DCAF5Q96JK2 942 aa7.36□□□□□ -1.23
CMTM1-207ENST00000465057 CFHR5Q9BXR6 569 aa7.36□□□□□ -1.23
CMTM1-207ENST00000465057 CRISPLD1Q9H336 500 aa7.36□□□□□ -1.23
CMTM1-207ENST00000465057 RUBCNLQ9H714 662 aa7.36□□□□□ -1.23
CMTM1-207ENST00000465057 TFIP11Q9UBB9 837 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms