RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 F13BP05160 661 aa7.17□□□□□ -1.26
PTPN12-210ENST00000464313 CABP4P57796 275 aa7.17□□□□□ -1.26
PTPN12-210ENST00000464313 HHIPQ96QV1 700 aa7.17□□□□□ -1.26
PTPN12-210ENST00000464313 ELP3Q9H9T3 547 aa7.17□□□□□ -1.26
PTPN12-210ENST00000464313 HIF3AQ9Y2N7 669 aa7.17□□□□□ -1.26
PTPN12-210ENST00000464313 JUNBP17275 347 aaPredicted RBP7.16□□□□□ -1.26
PTPN12-210ENST00000464313 USP5P45974 858 aa7.16□□□□□ -1.26
PTPN12-210ENST00000464313 ZNF438Q7Z4V0 828 aa7.16□□□□□ -1.26
PTPN12-210ENST00000464313 TTC16Q8NEE8 873 aa7.16□□□□□ -1.26
PTPN12-210ENST00000464313 WNT8BQ93098 351 aa7.16□□□□□ -1.26
PTPN12-210ENST00000464313 NIF3L1Q9GZT8 377 aa7.16□□□□□ -1.26
PTPN12-210ENST00000464313 OSGEPQ9NPF4 335 aa7.16□□□□□ -1.26
PTPN12-210ENST00000464313 ATG3Q9NT62 314 aa7.16□□□□□ -1.26
PTPN12-210ENST00000464313 FOXD3Q9UJU5 478 aaPredicted RBP7.16□□□□□ -1.26
PTPN12-210ENST00000464313 ANGEL1Q9UNK9 670 aaKnown RBP7.16□□□□□ -1.26
PTPN12-210ENST00000464313 NFKBIEO00221 500 aa7.15□□□□□ -1.26
PTPN12-210ENST00000464313 ITGB5P18084 799 aa7.15□□□□□ -1.26
PTPN12-210ENST00000464313 RXRBP28702 533 aa7.15□□□□□ -1.26
PTPN12-210ENST00000464313 NPAS4Q8IUM7 802 aa7.15□□□□□ -1.26
PTPN12-210ENST00000464313 ZSCAN29Q8IWY8 852 aaPredicted RBP7.15□□□□□ -1.26
PTPN12-210ENST00000464313 CITED4Q96RK1 184 aa7.15□□□□□ -1.26
PTPN12-210ENST00000464313 SALL4Q9UJQ4 1053 aa7.15□□□□□ -1.26
PTPN12-210ENST00000464313 LEMD3Q9Y2U8 911 aa7.15□□□□□ -1.26
PTPN12-210ENST00000464313 TREHO43280 583 aa7.14□□□□□ -1.27
PTPN12-210ENST00000464313 EHHADHQ08426 723 aa7.14□□□□□ -1.27
PTPN12-210ENST00000464313 PDE3BQ13370 1112 aa7.14□□□□□ -1.27
PTPN12-210ENST00000464313 ORC1Q13415 861 aa7.14□□□□□ -1.27
PTPN12-210ENST00000464313 ZNF124Q15973 351 aa7.14□□□□□ -1.27
PTPN12-210ENST00000464313 MSMPQ1L6U9 139 aa7.14□□□□□ -1.27
PTPN12-210ENST00000464313 ZNF648Q5T619 568 aaPredicted RBP7.14□□□□□ -1.27
PTPN12-210ENST00000464313 NFXL1Q6ZNB6 911 aa7.14□□□□□ -1.27
PTPN12-210ENST00000464313 C1orf127Q8N9H9 656 aa7.14□□□□□ -1.27
PTPN12-210ENST00000464313 RGS22Q8NE09 1264 aa7.14□□□□□ -1.27
PTPN12-210ENST00000464313 DMRTB1Q96MA1 342 aa7.14□□□□□ -1.27
PTPN12-210ENST00000464313 OSBPL1AQ9BXW6 950 aa7.14□□□□□ -1.27
PTPN12-210ENST00000464313 DZANK1Q9NVP4 752 aa7.14□□□□□ -1.27
PTPN12-210ENST00000464313 CCDC39Q9UFE4 941 aa7.14□□□□□ -1.27
PTPN12-210ENST00000464313 PDE2AO00408 941 aaPredicted RBP7.13□□□□□ -1.27
PTPN12-210ENST00000464313 TNFRSF21O75509 655 aa7.13□□□□□ -1.27
PTPN12-210ENST00000464313 RPLP1P05386 114 aaKnown RBP7.13□□□□□ -1.27
PTPN12-210ENST00000464313 PDE12Q6L8Q7 609 aaKnown RBP7.13□□□□□ -1.27
PTPN12-210ENST00000464313 C12orf50Q8NA57 414 aaPredicted RBP7.13□□□□□ -1.27
PTPN12-210ENST00000464313 SOX13Q9UN79 622 aa7.13□□□□□ -1.27
PTPN12-210ENST00000464313 MEGF11A6BM72 1044 aa7.12□□□□□ -1.27
PTPN12-210ENST00000464313 P4HBP07237 508 aaKnown RBP7.12□□□□□ -1.27
PTPN12-210ENST00000464313 FOSL1P15407 271 aa7.12□□□□□ -1.27
PTPN12-210ENST00000464313 MAPK8P45983 427 aa7.12□□□□□ -1.27
PTPN12-210ENST00000464313 FMR1Q06787 632 aaKnown RBP eCLIP7.12□□□□□ -1.27
PTPN12-210ENST00000464313 C19orf57Q0VDD7 668 aa7.12□□□□□ -1.27
PTPN12-210ENST00000464313 DSC3Q14574 896 aa7.12□□□□□ -1.27
PTPN12-210ENST00000464313 XKR5Q6UX68 686 aa7.12□□□□□ -1.27
PTPN12-210ENST00000464313 GIMAP7Q8NHV1 300 aa7.12□□□□□ -1.27
PTPN12-210ENST00000464313 ALKBH8Q96BT7 664 aaKnown RBP7.12□□□□□ -1.27
PTPN12-210ENST00000464313 SETDB2Q96T68 719 aa7.12□□□□□ -1.27
PTPN12-210ENST00000464313 USP26Q9BXU7 913 aa7.12□□□□□ -1.27
PTPN12-210ENST00000464313 CHRDQ9H2X0 955 aa7.12□□□□□ -1.27
PTPN12-210ENST00000464313 SOX1O00570 391 aaPredicted RBP7.11□□□□□ -1.27
PTPN12-210ENST00000464313 DLGAP3O95886 979 aa7.11□□□□□ -1.27
PTPN12-210ENST00000464313 CES1P23141 567 aa7.11□□□□□ -1.27
PTPN12-210ENST00000464313 ARL4DP49703 201 aa7.11□□□□□ -1.27
PTPN12-210ENST00000464313 TAGLNQ01995 201 aaKnown RBP7.11□□□□□ -1.27
PTPN12-210ENST00000464313 COL19A1Q14993 1142 aa7.11□□□□□ -1.27
PTPN12-210ENST00000464313 NFKBIBQ15653 356 aa7.11□□□□□ -1.27
PTPN12-210ENST00000464313 NUTM2GQ5VZR2 741 aa7.11□□□□□ -1.27
PTPN12-210ENST00000464313 USPL1Q5W0Q7 1092 aa7.11□□□□□ -1.27
PTPN12-210ENST00000464313 SNX29Q8TEQ0 813 aa7.11□□□□□ -1.27
PTPN12-210ENST00000464313 PHACTR2O75167 634 aa7.1□□□□□ -1.27
PTPN12-210ENST00000464313 TIAF1O95411 115 aa7.1□□□□□ -1.27
PTPN12-210ENST00000464313 DRD2P14416 443 aa7.1□□□□□ -1.27
PTPN12-210ENST00000464313 ADMP35318 185 aa7.1□□□□□ -1.27
PTPN12-210ENST00000464313 PLCB3Q01970 1234 aa7.1□□□□□ -1.27
PTPN12-210ENST00000464313 CDPF1Q6NVV7 123 aa7.1□□□□□ -1.27
PTPN12-210ENST00000464313 TP53INP2Q8IXH6 220 aa7.1□□□□□ -1.27
PTPN12-210ENST00000464313 SMG8Q8ND04 991 aaKnown RBP7.1□□□□□ -1.27
PTPN12-210ENST00000464313 FBLIM1Q8WUP2 373 aa7.1□□□□□ -1.27
PTPN12-210ENST00000464313 TMPRSS13Q9BYE2 586 aa7.1□□□□□ -1.27
PTPN12-210ENST00000464313 PNMA6FA0A0J9YX94 578 aa7.09□□□□□ -1.27
PTPN12-210ENST00000464313 LOC100289279A0A1B0GTE1 492 aa7.09□□□□□ -1.27
PTPN12-210ENST00000464313 FAM95CA0A1B0GW59 222 aa7.09□□□□□ -1.27
PTPN12-210ENST00000464313 EIF1AYO14602 144 aaKnown RBP7.09□□□□□ -1.27
PTPN12-210ENST00000464313 EREGO14944 169 aa7.09□□□□□ -1.27
PTPN12-210ENST00000464313 PRNPP04156 253 aa7.09□□□□□ -1.27
PTPN12-210ENST00000464313 POLR3DP05423 398 aaPredicted RBP7.09□□□□□ -1.27
PTPN12-210ENST00000464313 FBXL18Q96ME1 805 aa7.09□□□□□ -1.27
PTPN12-210ENST00000464313 CSRNP1Q96S65 589 aa7.09□□□□□ -1.27
PTPN12-210ENST00000464313 WWC3Q9ULE0 1092 aa7.09□□□□□ -1.27
PTPN12-210ENST00000464313 ERCC3P19447 782 aa7.08□□□□□ -1.28
PTPN12-210ENST00000464313 USP11P51784 963 aa7.08□□□□□ -1.28
PTPN12-210ENST00000464313 IKBKEQ14164 716 aa7.08□□□□□ -1.28
PTPN12-210ENST00000464313 PAOXQ6QHF9 649 aa7.08□□□□□ -1.28
PTPN12-210ENST00000464313 VN1R5Q7Z5H4 357 aa7.08□□□□□ -1.28
PTPN12-210ENST00000464313 FBXO33Q7Z6M2 555 aa7.08□□□□□ -1.28
PTPN12-210ENST00000464313 VSIG10LQ86VR7 867 aa7.08□□□□□ -1.28
PTPN12-210ENST00000464313 TMEM102Q8N9M5 508 aaPredicted RBP7.08□□□□□ -1.28
PTPN12-210ENST00000464313 ZFYVE28Q9HCC9 887 aa7.08□□□□□ -1.28
PTPN12-210ENST00000464313 CYP26A1O43174 497 aa7.07□□□□□ -1.28
PTPN12-210ENST00000464313 CPNE3O75131 537 aaKnown RBP7.07□□□□□ -1.28
PTPN12-210ENST00000464313 ZNF865P0CJ78 1059 aaPredicted RBP7.07□□□□□ -1.28
PTPN12-210ENST00000464313 EAPPQ56P03 285 aaPredicted RBP7.07□□□□□ -1.28
PTPN12-210ENST00000464313 NXPE3Q969Y0 559 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms