RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 CTSHP09668 335 aa7.11□□□□□ -1.27
USP9X-204ENST00000463829 NOS3P29474 1203 aa7.11□□□□□ -1.27
USP9X-204ENST00000463829 TSNAXIP1Q2TAA8 658 aa7.11□□□□□ -1.27
USP9X-204ENST00000463829 RPS26P11Q5JNZ5 115 aaPredicted RBP7.11□□□□□ -1.27
USP9X-204ENST00000463829 CLEC4MQ9H2X3 399 aaPredicted RBP7.11□□□□□ -1.27
USP9X-204ENST00000463829 PPM1HQ9ULR3 514 aa7.11□□□□□ -1.27
USP9X-204ENST00000463829 TAF1CQ15572 869 aaPredicted RBP7.1□□□□□ -1.27
USP9X-204ENST00000463829 VN1R5Q7Z5H4 357 aa7.1□□□□□ -1.27
USP9X-204ENST00000463829 SLC51AQ86UW1 340 aa7.1□□□□□ -1.27
USP9X-204ENST00000463829 TMEM87AQ8NBN3 555 aa7.1□□□□□ -1.27
USP9X-204ENST00000463829 MRPL18Q9H0U6 180 aaKnown RBP7.1□□□□□ -1.27
USP9X-204ENST00000463829 ZNF576Q9H609 170 aa7.1□□□□□ -1.27
USP9X-204ENST00000463829 AKTIPQ9H8T0 292 aa7.1□□□□□ -1.27
USP9X-204ENST00000463829 SRA1Q9HD15 236 aaKnown RBP7.1□□□□□ -1.27
USP9X-204ENST00000463829 USP31Q70CQ4 1352 aa7.09□□□□□ -1.27
USP9X-204ENST00000463829 EPHA1P21709 976 aa7.09□□□□□ -1.27
USP9X-204ENST00000463829 PCDH1Q08174 1060 aa7.09□□□□□ -1.27
USP9X-204ENST00000463829 IKBKEQ14164 716 aa7.09□□□□□ -1.27
USP9X-204ENST00000463829 FAM117BQ6P1L5 589 aa7.09□□□□□ -1.27
USP9X-204ENST00000463829 MAP4K3Q8IVH8 894 aa7.09□□□□□ -1.27
USP9X-204ENST00000463829 ANKRD24Q8TF21 1146 aa7.09□□□□□ -1.27
USP9X-204ENST00000463829 RNF112Q9ULX5 631 aa7.09□□□□□ -1.27
USP9X-204ENST00000463829 H3BRJ5 948 aa7.08□□□□□ -1.28
USP9X-204ENST00000463829 LINC01387J3KSC0 135 aa7.08□□□□□ -1.28
USP9X-204ENST00000463829 DLL1O00548 723 aa7.08□□□□□ -1.28
USP9X-204ENST00000463829 DEAF1O75398 565 aaPredicted RBP7.08□□□□□ -1.28
USP9X-204ENST00000463829 RECKO95980 971 aa7.08□□□□□ -1.28
USP9X-204ENST00000463829 CDC25BP30305 580 aa7.08□□□□□ -1.28
USP9X-204ENST00000463829 ST13P50502 369 aaKnown RBP7.08□□□□□ -1.28
USP9X-204ENST00000463829 PRR23CQ6ZRP0 262 aa7.08□□□□□ -1.28
USP9X-204ENST00000463829 WNT8BQ93098 351 aa7.08□□□□□ -1.28
USP9X-204ENST00000463829 MEGF10Q96KG7 1140 aa7.08□□□□□ -1.28
USP9X-204ENST00000463829 CEP44Q9C0F1 390 aa7.08□□□□□ -1.28
USP9X-204ENST00000463829 TTF2Q9UNY4 1162 aaKnown RBP7.08□□□□□ -1.28
USP9X-204ENST00000463829 SOX1O00570 391 aaPredicted RBP7.07□□□□□ -1.28
USP9X-204ENST00000463829 EIF4EBP3O60516 100 aaPredicted RBP7.07□□□□□ -1.28
USP9X-204ENST00000463829 ESRRAP11474 423 aaPredicted RBP7.07□□□□□ -1.28
USP9X-204ENST00000463829 ARL4DP49703 201 aa7.07□□□□□ -1.28
USP9X-204ENST00000463829 PIP4K2BP78356 416 aa7.07□□□□□ -1.28
USP9X-204ENST00000463829 ZNF423Q2M1K9 1284 aa7.07□□□□□ -1.28
USP9X-204ENST00000463829 LDLRAD1Q5T700 205 aa7.07□□□□□ -1.28
USP9X-204ENST00000463829 MEI1Q5TIA1 1274 aa7.07□□□□□ -1.28
USP9X-204ENST00000463829 TMEM130Q8N3G9 435 aa7.07□□□□□ -1.28
USP9X-204ENST00000463829 DDX54Q8TDD1 881 aaKnown RBP7.07□□□□□ -1.28
USP9X-204ENST00000463829 SEC31BQ9NQW1 1179 aa7.07□□□□□ -1.28
USP9X-204ENST00000463829 SCAMP3O14828 347 aaKnown RBP7.06□□□□□ -1.28
USP9X-204ENST00000463829 FSCN2O14926 492 aa7.06□□□□□ -1.28
USP9X-204ENST00000463829 B3GALT4O96024 378 aa7.06□□□□□ -1.28
USP9X-204ENST00000463829 PPP2R3AQ06190 1150 aa7.06□□□□□ -1.28
USP9X-204ENST00000463829 FAAP100Q0VG06 881 aa7.06□□□□□ -1.28
USP9X-204ENST00000463829 TPTE2Q6XPS3 522 aa7.06□□□□□ -1.28
USP9X-204ENST00000463829 SV2BQ7L1I2 683 aa7.06□□□□□ -1.28
USP9X-204ENST00000463829 SOX17Q9H6I2 414 aaPredicted RBP7.06□□□□□ -1.28
USP9X-204ENST00000463829 TMEM39AQ9NV64 488 aa7.06□□□□□ -1.28
USP9X-204ENST00000463829 CCDC85BQ15834 202 aaPredicted RBP7.05□□□□□ -1.28
USP9X-204ENST00000463829 TXNDC11Q6PKC3 985 aa7.05□□□□□ -1.28
USP9X-204ENST00000463829 KLHL23Q8NBE8 558 aa7.05□□□□□ -1.28
USP9X-204ENST00000463829 SLC7A3Q8WY07 619 aa7.05□□□□□ -1.28
USP9X-204ENST00000463829 NECAB3Q96P71 396 aaPredicted RBP7.05□□□□□ -1.28
USP9X-204ENST00000463829 NOC4LQ9BVI4 516 aaKnown RBP7.05□□□□□ -1.28
USP9X-204ENST00000463829 OSGEPQ9NPF4 335 aa7.05□□□□□ -1.28
USP9X-204ENST00000463829 METTL5Q9NRN9 209 aaKnown RBP7.05□□□□□ -1.28
USP9X-204ENST00000463829 GPN3Q9UHW5 284 aaPredicted RBP7.05□□□□□ -1.28
USP9X-204ENST00000463829 F8W735 103 aaPredicted RBP7.04□□□□□ -1.28
USP9X-204ENST00000463829 FBXO24O75426 580 aa7.04□□□□□ -1.28
USP9X-204ENST00000463829 ALX3O95076 343 aa7.04□□□□□ -1.28
USP9X-204ENST00000463829 ZNF157P51786 506 aaPredicted RBP7.04□□□□□ -1.28
USP9X-204ENST00000463829 C19orf57Q0VDD7 668 aa7.04□□□□□ -1.28
USP9X-204ENST00000463829 SETDB1Q15047 1291 aa7.04□□□□□ -1.28
USP9X-204ENST00000463829 DZIP1LQ8IYY4 767 aaKnown RBP7.04□□□□□ -1.28
USP9X-204ENST00000463829 KRTAP9-2Q9BYQ4 174 aa7.04□□□□□ -1.28
USP9X-204ENST00000463829 PCMTD2Q9NV79 361 aa7.04□□□□□ -1.28
USP9X-204ENST00000463829 RLBP1P12271 317 aa7.03□□□□□ -1.28
USP9X-204ENST00000463829 TCF3P15923 654 aa7.03□□□□□ -1.28
USP9X-204ENST00000463829 GLB1P16278 677 aa7.03□□□□□ -1.28
USP9X-204ENST00000463829 FSTP19883 344 aa7.03□□□□□ -1.28
USP9X-204ENST00000463829 ZNF76P36508 570 aa7.03□□□□□ -1.28
USP9X-204ENST00000463829 CARD10Q9BWT7 1032 aa7.03□□□□□ -1.28
USP9X-204ENST00000463829 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.02□□□□□ -1.29
USP9X-204ENST00000463829 ENC1O14682 589 aa7.02□□□□□ -1.29
USP9X-204ENST00000463829 GSC2O15499 205 aa7.02□□□□□ -1.29
USP9X-204ENST00000463829 FANCCQ00597 558 aa7.02□□□□□ -1.29
USP9X-204ENST00000463829 GSTM4Q03013 218 aa7.02□□□□□ -1.29
USP9X-204ENST00000463829 HGSNATQ68CP4 663 aa7.02□□□□□ -1.29
USP9X-204ENST00000463829 HS2ST1Q7LGA3 356 aa7.02□□□□□ -1.29
USP9X-204ENST00000463829 RNF34Q969K3 372 aa7.02□□□□□ -1.29
USP9X-204ENST00000463829 KLHDC7BQ96G42 594 aa7.02□□□□□ -1.29
USP9X-204ENST00000463829 SAMM50Q9Y512 469 aa7.02□□□□□ -1.29
USP9X-204ENST00000463829 CYP11A1P05108 521 aa7.01□□□□□ -1.29
USP9X-204ENST00000463829 CD68P34810 354 aaPredicted RBP7.01□□□□□ -1.29
USP9X-204ENST00000463829 AP3B2Q13367 1082 aa7.01□□□□□ -1.29
USP9X-204ENST00000463829 GALNT11Q8NCW6 608 aa7.01□□□□□ -1.29
USP9X-204ENST00000463829 RAXQ9Y2V3 346 aa7.01□□□□□ -1.29
USP9X-204ENST00000463829 KRTAP9-6A0A140TA67 174 aa7□□□□□ -1.29
USP9X-204ENST00000463829 CELA3AP09093 270 aa7□□□□□ -1.29
USP9X-204ENST00000463829 NME2P22392 152 aa7□□□□□ -1.29
USP9X-204ENST00000463829 RELL1Q8IUW5 271 aa7□□□□□ -1.29
USP9X-204ENST00000463829 RSRP1Q9BUV0 290 aa7□□□□□ -1.29
USP9X-204ENST00000463829 EMILIN2Q9BXX0 1053 aa7□□□□□ -1.29
USP9X-204ENST00000463829 CEP41Q9BYV8 373 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms