RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 IQSEC3Q9UPP2 1182 aaPredicted RBP25.64■■□□□ 1.7
PDLIM4-205ENST00000463615 IPO8O15397 1037 aaKnown RBP25.63■■□□□ 1.69
PDLIM4-205ENST00000463615 FRAT2O75474 233 aaPredicted RBP25.63■■□□□ 1.69
PDLIM4-205ENST00000463615 GNAI3P08754 354 aa25.62■■□□□ 1.69
PDLIM4-205ENST00000463615 IL15P40933 162 aaPredicted RBP25.62■■□□□ 1.69
PDLIM4-205ENST00000463615 CHAF1AQ13111 956 aaPredicted RBP25.62■■□□□ 1.69
PDLIM4-205ENST00000463615 MTX1Q13505 466 aa25.62■■□□□ 1.69
PDLIM4-205ENST00000463615 NBPF12Q5TAG4 269 aaPredicted RBP25.62■■□□□ 1.69
PDLIM4-205ENST00000463615 SPRYD7Q5W111 196 aa25.62■■□□□ 1.69
PDLIM4-205ENST00000463615 TDRD3Q9H7E2 651 aaKnown RBP25.62■■□□□ 1.69
PDLIM4-205ENST00000463615 CEP126Q9P2H0 1117 aa25.62■■□□□ 1.69
PDLIM4-205ENST00000463615 PRKG1Q13976 671 aa25.61■■□□□ 1.69
PDLIM4-205ENST00000463615 NOM1Q5C9Z4 860 aaKnown RBP25.61■■□□□ 1.69
PDLIM4-205ENST00000463615 CFHR5Q9BXR6 569 aa25.61■■□□□ 1.69
PDLIM4-205ENST00000463615 MCOLN1Q9GZU1 580 aa25.61■■□□□ 1.69
PDLIM4-205ENST00000463615 MAST3O60307 1309 aa25.61■■□□□ 1.69
PDLIM4-205ENST00000463615 TRIM27P14373 513 aa25.6■■□□□ 1.69
PDLIM4-205ENST00000463615 SREBF2Q12772 1141 aa25.6■■□□□ 1.69
PDLIM4-205ENST00000463615 ATF7IPQ6VMQ6 1270 aa25.6■■□□□ 1.69
PDLIM4-205ENST00000463615 WDR66Q8TBY9 1149 aa25.6■■□□□ 1.69
PDLIM4-205ENST00000463615 TEKT1Q969V4 418 aa25.6■■□□□ 1.69
PDLIM4-205ENST00000463615 ZDHHC15Q96MV8 337 aa25.6■■□□□ 1.69
PDLIM4-205ENST00000463615 TEPSINQ96N21 525 aa25.6■■□□□ 1.69
PDLIM4-205ENST00000463615 ZBTB48P10074 688 aaPredicted RBP25.59■■□□□ 1.69
PDLIM4-205ENST00000463615 ATP2B3Q16720 1220 aa25.59■■□□□ 1.69
PDLIM4-205ENST00000463615 HHIPL2Q6UWX4 724 aa25.59■■□□□ 1.69
PDLIM4-205ENST00000463615 MIER1Q8N108 512 aa25.59■■□□□ 1.69
PDLIM4-205ENST00000463615 SLC10A4Q96EP9 437 aa25.59■■□□□ 1.69
PDLIM4-205ENST00000463615 SIL1Q9H173 461 aa25.59■■□□□ 1.69
PDLIM4-205ENST00000463615 FZD1Q9UP38 647 aa25.59■■□□□ 1.69
PDLIM4-205ENST00000463615 LAMB1P07942 1786 aa25.59■■□□□ 1.69
PDLIM4-205ENST00000463615 USP2O75604 605 aaPredicted RBP25.58■■□□□ 1.69
PDLIM4-205ENST00000463615 IREB2P48200 963 aaKnown RBP25.58■■□□□ 1.69
PDLIM4-205ENST00000463615 INHBEP58166 350 aa25.58■■□□□ 1.69
PDLIM4-205ENST00000463615 FKBP1CQ5VVH2 108 aa25.58■■□□□ 1.69
PDLIM4-205ENST00000463615 DIEXFQ68CQ4 756 aaKnown RBP25.58■■□□□ 1.69
PDLIM4-205ENST00000463615 TNNI2P48788 182 aa25.57■■□□□ 1.68
PDLIM4-205ENST00000463615 DGKZQ13574 1117 aa25.57■■□□□ 1.68
PDLIM4-205ENST00000463615 PA2G4Q9UQ80 394 aaKnown RBP25.57■■□□□ 1.68
PDLIM4-205ENST00000463615 SEMA3EO15041 775 aa25.56■■□□□ 1.68
PDLIM4-205ENST00000463615 BCAR3O75815 825 aa25.56■■□□□ 1.68
PDLIM4-205ENST00000463615 APOBEC3HQ6NTF7 200 aaKnown RBP25.56■■□□□ 1.68
PDLIM4-205ENST00000463615 ANKRD13AQ8IZ07 590 aa25.56■■□□□ 1.68
PDLIM4-205ENST00000463615 CLMNQ96JQ2 1002 aa25.56■■□□□ 1.68
PDLIM4-205ENST00000463615 MANSC4A6NHS7 340 aaPredicted RBP25.55■■□□□ 1.68
PDLIM4-205ENST00000463615 WNK4Q96J92 1243 aa25.55■■□□□ 1.68
PDLIM4-205ENST00000463615 GNL3LQ9NVN8 582 aaKnown RBP25.55■■□□□ 1.68
PDLIM4-205ENST00000463615 SALL1Q9NSC2 1324 aa25.55■■□□□ 1.68
PDLIM4-205ENST00000463615 FAM83AQ86UY5 434 aa25.54■■□□□ 1.68
PDLIM4-205ENST00000463615 MYH13Q9UKX3 1938 aa25.54■■□□□ 1.68
PDLIM4-205ENST00000463615 TCP10L2B9ZVM9 353 aa25.53■■□□□ 1.68
PDLIM4-205ENST00000463615 SRGAP3O43295 1099 aa25.53■■□□□ 1.68
PDLIM4-205ENST00000463615 ALDH1A1P00352 501 aa25.53■■□□□ 1.68
PDLIM4-205ENST00000463615 MKRN3Q13064 507 aaKnown RBP25.53■■□□□ 1.68
PDLIM4-205ENST00000463615 TMEM39BQ9GZU3 492 aa25.53■■□□□ 1.68
PDLIM4-205ENST00000463615 HNRNPUQ00839 825 aaKnown RBP eCLIP25.52■■□□□ 1.68
PDLIM4-205ENST00000463615 CTU1Q7Z7A3 348 aaKnown RBP25.52■■□□□ 1.68
PDLIM4-205ENST00000463615 CDAN1Q8IWY9 1227 aa25.52■■□□□ 1.68
PDLIM4-205ENST00000463615 DENND2AQ9ULE3 1009 aa25.52■■□□□ 1.68
PDLIM4-205ENST00000463615 PDS5AQ29RF7 1337 aaKnown RBP25.52■■□□□ 1.68
PDLIM4-205ENST00000463615 RPAP1Q9BWH6 1393 aaPredicted RBP25.52■■□□□ 1.68
PDLIM4-205ENST00000463615 TBC1D8O95759 1140 aa25.51■■□□□ 1.67
PDLIM4-205ENST00000463615 GNAI2P04899 355 aa25.51■■□□□ 1.67
PDLIM4-205ENST00000463615 RGS19P49795 217 aa25.51■■□□□ 1.67
PDLIM4-205ENST00000463615 FRAT1Q92837 279 aaPredicted RBP25.51■■□□□ 1.67
PDLIM4-205ENST00000463615 TMOD2Q9NZR1 351 aa25.51■■□□□ 1.67
PDLIM4-205ENST00000463615 TNNQ9UQP3 1299 aa25.51■■□□□ 1.67
PDLIM4-205ENST00000463615 PHKA1P46020 1223 aa25.5■■□□□ 1.67
PDLIM4-205ENST00000463615 ZKSCAN2Q63HK3 967 aa25.5■■□□□ 1.67
PDLIM4-205ENST00000463615 OTOFQ9HC10 1997 aa25.5■■□□□ 1.67
PDLIM4-205ENST00000463615 TESPA1A2RU30 521 aaPredicted RBP25.49■■□□□ 1.67
PDLIM4-205ENST00000463615 CCDC85CA6NKD9 419 aa25.49■■□□□ 1.67
PDLIM4-205ENST00000463615 GPR25O00155 361 aa25.49■■□□□ 1.67
PDLIM4-205ENST00000463615 CCDC102BQ68D86 513 aa25.49■■□□□ 1.67
PDLIM4-205ENST00000463615 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.49■■□□□ 1.67
PDLIM4-205ENST00000463615 IFNL1Q8IU54 200 aa25.49■■□□□ 1.67
PDLIM4-205ENST00000463615 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.49■■□□□ 1.67
PDLIM4-205ENST00000463615 ZNF296Q8WUU4 475 aaPredicted RBP25.49■■□□□ 1.67
PDLIM4-205ENST00000463615 AKAP2Q9Y2D5 859 aa25.49■■□□□ 1.67
PDLIM4-205ENST00000463615 PRDX5P30044 214 aa25.48■■□□□ 1.67
PDLIM4-205ENST00000463615 GJA5P36382 358 aa25.48■■□□□ 1.67
PDLIM4-205ENST00000463615 HOOK2Q96ED9 719 aa25.48■■□□□ 1.67
PDLIM4-205ENST00000463615 DAGLAQ9Y4D2 1042 aa25.48■■□□□ 1.67
PDLIM4-205ENST00000463615 ADORA1P30542 326 aa25.47■■□□□ 1.67
PDLIM4-205ENST00000463615 CACNB3P54284 484 aa25.47■■□□□ 1.67
PDLIM4-205ENST00000463615 MAP3K9P80192 1104 aa25.47■■□□□ 1.67
PDLIM4-205ENST00000463615 PKN2Q16513 984 aaKnown RBP25.47■■□□□ 1.67
PDLIM4-205ENST00000463615 ZGPATQ8N5A5 531 aaKnown RBP25.47■■□□□ 1.67
PDLIM4-205ENST00000463615 CLUAP1Q96AJ1 413 aa25.47■■□□□ 1.67
PDLIM4-205ENST00000463615 ZBED9Q6R2W3 1325 aa25.46■■□□□ 1.67
PDLIM4-205ENST00000463615 A0A1B0GUL7 405 aa25.46■■□□□ 1.67
PDLIM4-205ENST00000463615 LDHBP07195 334 aaKnown RBP25.46■■□□□ 1.67
PDLIM4-205ENST00000463615 TIMM10P62072 90 aa25.46■■□□□ 1.67
PDLIM4-205ENST00000463615 TMEM57Q8N5G2 664 aa25.46■■□□□ 1.67
PDLIM4-205ENST00000463615 IGF2BP3O00425 579 aaKnown RBP eCLIP25.45■■□□□ 1.66
PDLIM4-205ENST00000463615 TFCP2Q12800 502 aa25.45■■□□□ 1.66
PDLIM4-205ENST00000463615 R3HDMLQ9H3Y0 253 aa25.45■■□□□ 1.66
PDLIM4-205ENST00000463615 PNMA6EA0A0J9YXQ4 647 aa25.44■■□□□ 1.66
PDLIM4-205ENST00000463615 RASGRF1Q13972 1273 aa25.44■■□□□ 1.66
PDLIM4-205ENST00000463615 VGLL4Q14135 290 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms