RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 BICC1Q9H694 974 aaKnown RBP29.22■■■□□ 2.27
SSNA1-203ENST00000463511 MROH5Q6ZUA9 1318 aa29.21■■■□□ 2.27
SSNA1-203ENST00000463511 CRHR2Q13324 411 aa29.21■■■□□ 2.27
SSNA1-203ENST00000463511 ELP3Q9H9T3 547 aa29.21■■■□□ 2.27
SSNA1-203ENST00000463511 IQSEC3Q9UPP2 1182 aaPredicted RBP29.21■■■□□ 2.27
SSNA1-203ENST00000463511 UTYO14607 1347 aa29.2■■■□□ 2.27
SSNA1-203ENST00000463511 CRKP46108 304 aa29.2■■■□□ 2.26
SSNA1-203ENST00000463511 TCP10L2B9ZVM9 353 aa29.19■■■□□ 2.26
SSNA1-203ENST00000463511 GRIK5Q16478 980 aa29.19■■■□□ 2.26
SSNA1-203ENST00000463511 OTUD7BQ6GQQ9 843 aa29.19■■■□□ 2.26
SSNA1-203ENST00000463511 VPS37DQ86XT2 251 aa29.19■■■□□ 2.26
SSNA1-203ENST00000463511 OPTNQ96CV9 577 aa29.19■■■□□ 2.26
SSNA1-203ENST00000463511 TEPSINQ96N21 525 aa29.19■■■□□ 2.26
SSNA1-203ENST00000463511 TMEM39BQ9GZU3 492 aa29.19■■■□□ 2.26
SSNA1-203ENST00000463511 CHAF1AQ13111 956 aaPredicted RBP29.18■■■□□ 2.26
SSNA1-203ENST00000463511 LRRC24Q50LG9 513 aa29.18■■■□□ 2.26
SSNA1-203ENST00000463511 PTPN18Q99952 460 aa29.18■■■□□ 2.26
SSNA1-203ENST00000463511 HNRNPUQ00839 825 aaKnown RBP eCLIP29.17■■■□□ 2.26
SSNA1-203ENST00000463511 RABL6Q3YEC7 729 aaPredicted RBP29.17■■■□□ 2.26
SSNA1-203ENST00000463511 METTL24Q5JXM2 366 aa29.17■■■□□ 2.26
SSNA1-203ENST00000463511 FBXO33Q7Z6M2 555 aa29.17■■■□□ 2.26
SSNA1-203ENST00000463511 CD99L2Q8TCZ2 262 aa29.17■■■□□ 2.26
SSNA1-203ENST00000463511 ERO1AQ96HE7 468 aa29.17■■■□□ 2.26
SSNA1-203ENST00000463511 MKI67P46013 3256 aaKnown RBP29.16■■■□□ 2.26
SSNA1-203ENST00000463511 TESPA1A2RU30 521 aaPredicted RBP29.16■■■□□ 2.26
SSNA1-203ENST00000463511 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.16■■■□□ 2.26
SSNA1-203ENST00000463511 ANKRD44Q8N8A2 993 aa29.16■■■□□ 2.26
SSNA1-203ENST00000463511 CNKSR2Q8WXI2 1034 aa29.16■■■□□ 2.26
SSNA1-203ENST00000463511 TNNI2P48788 182 aa29.15■■■□□ 2.26
SSNA1-203ENST00000463511 BRCA2P51587 3418 aa29.15■■■□□ 2.26
SSNA1-203ENST00000463511 KIAA0100Q14667 2235 aaKnown RBP29.14■■■□□ 2.26
SSNA1-203ENST00000463511 FRAT2O75474 233 aaPredicted RBP29.14■■■□□ 2.26
SSNA1-203ENST00000463511 CAVIN4Q5BKX8 364 aa29.14■■■□□ 2.26
SSNA1-203ENST00000463511 MRPL50Q8N5N7 158 aaKnown RBP29.14■■■□□ 2.26
SSNA1-203ENST00000463511 VGLL2Q8N8G2 317 aa29.14■■■□□ 2.26
SSNA1-203ENST00000463511 MS4A4AQ96JQ5 239 aa29.14■■■□□ 2.26
SSNA1-203ENST00000463511 VGLL4Q14135 290 aa29.13■■■□□ 2.25
SSNA1-203ENST00000463511 KLHDC4Q8TBB5 520 aa29.13■■■□□ 2.25
SSNA1-203ENST00000463511 CACNB3P54284 484 aa29.12■■■□□ 2.25
SSNA1-203ENST00000463511 TBC1D22AQ8WUA7 517 aa29.12■■■□□ 2.25
SSNA1-203ENST00000463511 TEKT1Q969V4 418 aa29.12■■■□□ 2.25
SSNA1-203ENST00000463511 PTPN22Q9Y2R2 807 aa29.12■■■□□ 2.25
SSNA1-203ENST00000463511 ZSWIM8A7E2V4 1837 aa29.12■■■□□ 2.25
SSNA1-203ENST00000463511 AK9Q5TCS8 1911 aa29.12■■■□□ 2.25
SSNA1-203ENST00000463511 PDE8BO95263 885 aa29.11■■■□□ 2.25
SSNA1-203ENST00000463511 CAP1Q01518 475 aa29.11■■■□□ 2.25
SSNA1-203ENST00000463511 SP3Q02447 781 aa29.11■■■□□ 2.25
SSNA1-203ENST00000463511 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.11■■■□□ 2.252e-6■□□□□ 8.3
SSNA1-203ENST00000463511 BRI3BPQ8WY22 251 aa29.11■■■□□ 2.25
SSNA1-203ENST00000463511 EFCC1Q9HA90 598 aa29.11■■■□□ 2.25
SSNA1-203ENST00000463511 POTEFA5A3E0 1075 aa29.1■■■□□ 2.25
SSNA1-203ENST00000463511 BCAMP50895 628 aa29.1■■■□□ 2.25
SSNA1-203ENST00000463511 HDLBPQ00341 1268 aaKnown RBP29.1■■■□□ 2.25
SSNA1-203ENST00000463511 CSADQ9Y600 493 aa29.1■■■□□ 2.25
SSNA1-203ENST00000463511 PTPRCP08575 1304 aa29.1■■■□□ 2.25
SSNA1-203ENST00000463511 CCL15-CCL14A0A0B4J2E2 113 aa29.09■■■□□ 2.25
SSNA1-203ENST00000463511 MAP3K9P80192 1104 aa29.09■■■□□ 2.25
SSNA1-203ENST00000463511 CCL15Q16663 113 aa29.09■■■□□ 2.25
SSNA1-203ENST00000463511 INTS3Q68E01 1043 aaKnown RBP29.09■■■□□ 2.25
SSNA1-203ENST00000463511 OTUD5Q96G74 571 aa29.09■■■□□ 2.25
SSNA1-203ENST00000463511 CDCA7LQ96GN5 454 aa29.09■■■□□ 2.25
SSNA1-203ENST00000463511 GTF2A2P52657 109 aa29.08■■■□□ 2.25
SSNA1-203ENST00000463511 SLFN5Q08AF3 891 aa29.08■■■□□ 2.25
SSNA1-203ENST00000463511 TAF1CQ15572 869 aaPredicted RBP29.07■■■□□ 2.24
SSNA1-203ENST00000463511 TMOD2Q9NZR1 351 aa29.07■■■□□ 2.24
SSNA1-203ENST00000463511 E9PSI1 815 aa29.06■■■□□ 2.24
SSNA1-203ENST00000463511 PUM3Q15397 648 aaKnown RBP29.06■■■□□ 2.24
SSNA1-203ENST00000463511 SSH1Q8WYL5 1049 aa29.06■■■□□ 2.24
SSNA1-203ENST00000463511 ZDHHC15Q96MV8 337 aa29.06■■■□□ 2.24
SSNA1-203ENST00000463511 USP44Q9H0E7 712 aa29.06■■■□□ 2.24
SSNA1-203ENST00000463511 MAST3O60307 1309 aa29.05■■■□□ 2.24
SSNA1-203ENST00000463511 FAM43AQ8N2R8 423 aa29.05■■■□□ 2.24
SSNA1-203ENST00000463511 PCDH10Q9P2E7 1040 aa29.05■■■□□ 2.24
SSNA1-203ENST00000463511 KIF16BQ96L93 1317 aa29.04■■■□□ 2.24
SSNA1-203ENST00000463511 FGFR2P21802 821 aa29.04■■■□□ 2.24
SSNA1-203ENST00000463511 TRMT2AQ8IZ69 625 aaKnown RBP29.04■■■□□ 2.24
SSNA1-203ENST00000463511 ARMC5Q96C12 935 aa29.04■■■□□ 2.24
SSNA1-203ENST00000463511 WRNIP1Q96S55 665 aa29.04■■■□□ 2.24
SSNA1-203ENST00000463511 ZFYVE28Q9HCC9 887 aa29.04■■■□□ 2.24
SSNA1-203ENST00000463511 SNCAIPQ9Y6H5 919 aa29.04■■■□□ 2.24
SSNA1-203ENST00000463511 SPDYE5A6NIY4 337 aa29.03■■■□□ 2.24
SSNA1-203ENST00000463511 IFIT1P09914 478 aaKnown RBP29.03■■■□□ 2.24
SSNA1-203ENST00000463511 APOBEC3HQ6NTF7 200 aaKnown RBP29.03■■■□□ 2.24
SSNA1-203ENST00000463511 FAM83AQ86UY5 434 aa29.03■■■□□ 2.24
SSNA1-203ENST00000463511 ZBED9Q6R2W3 1325 aa29.02■■■□□ 2.24
SSNA1-203ENST00000463511 ZKSCAN4Q969J2 545 aaPredicted RBP29.02■■■□□ 2.24
SSNA1-203ENST00000463511 SUGT1Q9Y2Z0 365 aa29.02■■■□□ 2.24
SSNA1-203ENST00000463511 RPAP1Q9BWH6 1393 aaPredicted RBP29.01■■■□□ 2.24
SSNA1-203ENST00000463511 FKBP1CQ5VVH2 108 aa29.01■■■□□ 2.23
SSNA1-203ENST00000463511 ERO1BQ86YB8 467 aa29.01■■■□□ 2.23
SSNA1-203ENST00000463511 MRIQ9BWK5 157 aa29.01■■■□□ 2.23
SSNA1-203ENST00000463511 SLC5A1P13866 664 aa29■■■□□ 2.23
SSNA1-203ENST00000463511 RFX5P48382 616 aaPredicted RBP29■■■□□ 2.23
SSNA1-203ENST00000463511 HHIPL2Q6UWX4 724 aa29■■■□□ 2.23
SSNA1-203ENST00000463511 EYA2O00167 538 aa28.99■■■□□ 2.23
SSNA1-203ENST00000463511 HOOK2Q96ED9 719 aa28.99■■■□□ 2.23
SSNA1-203ENST00000463511 PTCH2Q9Y6C5 1203 aa28.99■■■□□ 2.23
SSNA1-203ENST00000463511 DOCK2Q92608 1830 aa28.99■■■□□ 2.23
SSNA1-203ENST00000463511 MYH2Q9UKX2 1941 aa28.98■■■□□ 2.23
SSNA1-203ENST00000463511 CETPP11597 493 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms