RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 DOCK3Q8IZD9 2030 aa14.18□□□□□ -0.14
SSR3-202ENST00000463503 TLR2O60603 784 aa14.17□□□□□ -0.14
SSR3-202ENST00000463503 IL1R1P14778 569 aa14.17□□□□□ -0.14
SSR3-202ENST00000463503 ITGA6P23229 1130 aa14.17□□□□□ -0.14
SSR3-202ENST00000463503 IGHMBP2P38935 993 aaKnown RBP14.17□□□□□ -0.14
SSR3-202ENST00000463503 GTF2A2P52657 109 aa14.17□□□□□ -0.14
SSR3-202ENST00000463503 FKBP1AP62942 108 aaKnown RBP14.17□□□□□ -0.14
SSR3-202ENST00000463503 CHRNDQ07001 517 aa14.17□□□□□ -0.14
SSR3-202ENST00000463503 CWF19L2Q2TBE0 894 aaKnown RBP14.17□□□□□ -0.14
SSR3-202ENST00000463503 SPDYE2Q495Y8 402 aa14.17□□□□□ -0.14
SSR3-202ENST00000463503 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.17□□□□□ -0.14
SSR3-202ENST00000463503 DOCK2Q92608 1830 aa14.16□□□□□ -0.14
SSR3-202ENST00000463503 NEURL1BA8MQ27 555 aa14.16□□□□□ -0.14
SSR3-202ENST00000463503 UBE3BQ7Z3V4 1068 aa14.16□□□□□ -0.14
SSR3-202ENST00000463503 PLA2G12BQ9BX93 195 aa14.16□□□□□ -0.14
SSR3-202ENST00000463503 SPINK5Q9NQ38 1064 aaPredicted RBP14.16□□□□□ -0.14
SSR3-202ENST00000463503 FANCIQ9NVI1 1328 aa14.15□□□□□ -0.14
SSR3-202ENST00000463503 PHIPQ8WWQ0 1821 aa14.15□□□□□ -0.14
SSR3-202ENST00000463503 AK9Q5TCS8 1911 aa14.15□□□□□ -0.14
SSR3-202ENST00000463503 PI4KAP2A4QPH2 592 aa14.15□□□□□ -0.14
SSR3-202ENST00000463503 SPDYE5A6NIY4 337 aa14.15□□□□□ -0.14
SSR3-202ENST00000463503 H7C1W4 665 aa14.15□□□□□ -0.14
SSR3-202ENST00000463503 ELL2O00472 640 aaPredicted RBP14.15□□□□□ -0.14
SSR3-202ENST00000463503 DDX58O95786 925 aaKnown RBP14.15□□□□□ -0.14
SSR3-202ENST00000463503 GNRH1P01148 92 aa14.15□□□□□ -0.14
SSR3-202ENST00000463503 CASP7P55210 303 aa14.15□□□□□ -0.14
SSR3-202ENST00000463503 KSR2Q6VAB6 950 aa14.15□□□□□ -0.14
SSR3-202ENST00000463503 PI4KAP1Q8N8J0 262 aa14.15□□□□□ -0.14
SSR3-202ENST00000463503 C8orf58Q8NAV2 365 aa14.15□□□□□ -0.14
SSR3-202ENST00000463503 DPF3Q92784 378 aa14.15□□□□□ -0.14
SSR3-202ENST00000463503 LRCH3Q96II8 777 aa14.15□□□□□ -0.14
SSR3-202ENST00000463503 ZCCHC17Q9NP64 241 aaKnown RBP14.15□□□□□ -0.14
SSR3-202ENST00000463503 JAG2Q9Y219 1238 aa14.15□□□□□ -0.14
SSR3-202ENST00000463503 CDH23Q9H251 3354 aa14.15□□□□□ -0.14
SSR3-202ENST00000463503 ADGRA2Q96PE1 1338 aa14.15□□□□□ -0.15
SSR3-202ENST00000463503 DNAH12Q6ZR08 3092 aa14.14□□□□□ -0.15
SSR3-202ENST00000463503 MUC3AQ02505 3323 aa14.14□□□□□ -0.15
SSR3-202ENST00000463503 A0A1W2PPC1 479 aa14.14□□□□□ -0.15
SSR3-202ENST00000463503 BTBD19C9JJ37 291 aa14.14□□□□□ -0.15
SSR3-202ENST00000463503 ZBTB7BO15156 539 aaPredicted RBP14.14□□□□□ -0.15
SSR3-202ENST00000463503 TAF5LO75529 589 aa14.14□□□□□ -0.15
SSR3-202ENST00000463503 CSF1RP07333 972 aa14.14□□□□□ -0.15
SSR3-202ENST00000463503 KCNJ4P48050 445 aa14.14□□□□□ -0.15
SSR3-202ENST00000463503 GJA8P48165 433 aa14.14□□□□□ -0.15
SSR3-202ENST00000463503 MNX1P50219 401 aaPredicted RBP14.14□□□□□ -0.15
SSR3-202ENST00000463503 PRMT2P55345 433 aa14.14□□□□□ -0.15
SSR3-202ENST00000463503 TNFAIP1Q13829 316 aa14.14□□□□□ -0.15
SSR3-202ENST00000463503 TMEM39BQ9GZU3 492 aa14.14□□□□□ -0.15
SSR3-202ENST00000463503 ZNF70Q9UC06 446 aaPredicted RBP14.14□□□□□ -0.15
SSR3-202ENST00000463503 SNCAIPQ9Y6H5 919 aa14.14□□□□□ -0.15
SSR3-202ENST00000463503 DDX60LQ5H9U9 1706 aaKnown RBP14.14□□□□□ -0.15
SSR3-202ENST00000463503 CT47B1P0C2W7 299 aaPredicted RBP14.13□□□□□ -0.15
SSR3-202ENST00000463503 CDCA7LQ96GN5 454 aa14.13□□□□□ -0.15
SSR3-202ENST00000463503 TRIM47Q96LD4 638 aa14.13□□□□□ -0.15
SSR3-202ENST00000463503 MPHOSPH8Q99549 860 aa14.13□□□□□ -0.15
SSR3-202ENST00000463503 CHMP4AQ9BY43 222 aa14.13□□□□□ -0.15
SSR3-202ENST00000463503 FAM205AQ6ZU69 1335 aa14.13□□□□□ -0.15
SSR3-202ENST00000463503 GJB1P08034 283 aa14.12□□□□□ -0.15
SSR3-202ENST00000463503 MAP3K9P80192 1104 aa14.12□□□□□ -0.15
SSR3-202ENST00000463503 KIF22Q14807 665 aa14.12□□□□□ -0.15
SSR3-202ENST00000463503 C17orf99Q6UX52 265 aa14.12□□□□□ -0.15
SSR3-202ENST00000463503 ZNF804AQ7Z570 1209 aa14.12□□□□□ -0.15
SSR3-202ENST00000463503 HTATIP2Q9BUP3 242 aa14.12□□□□□ -0.15
SSR3-202ENST00000463503 TDRD3Q9H7E2 651 aaKnown RBP14.12□□□□□ -0.15
SSR3-202ENST00000463503 SRRDQ9UH36 339 aa14.12□□□□□ -0.15
SSR3-202ENST00000463503 SERPINA10Q9UK55 444 aa14.12□□□□□ -0.15
SSR3-202ENST00000463503 CETPP11597 493 aa14.11□□□□□ -0.15
SSR3-202ENST00000463503 CCL5P13501 91 aa14.11□□□□□ -0.15
SSR3-202ENST00000463503 OSBPP22059 807 aa14.11□□□□□ -0.15
SSR3-202ENST00000463503 RBM5P52756 815 aaKnown RBP eCLIP14.11□□□□□ -0.15
SSR3-202ENST00000463503 CCDC30Q5VVM6 783 aa14.11□□□□□ -0.15
SSR3-202ENST00000463503 HELBQ8NG08 1087 aaPredicted RBP14.11□□□□□ -0.15
SSR3-202ENST00000463503 NKX2-3Q8TAU0 364 aa14.11□□□□□ -0.15
SSR3-202ENST00000463503 TSR2Q969E8 191 aaKnown RBP14.11□□□□□ -0.15
SSR3-202ENST00000463503 RIPOR2Q9Y4F9 1068 aa14.11□□□□□ -0.15
SSR3-202ENST00000463503 CSADQ9Y600 493 aa14.11□□□□□ -0.15
SSR3-202ENST00000463503 DOCK1Q14185 1865 aa14.1□□□□□ -0.15
SSR3-202ENST00000463503 TCP10L2B9ZVM9 353 aa14.1□□□□□ -0.15
SSR3-202ENST00000463503 IRF6O14896 467 aa14.1□□□□□ -0.15
SSR3-202ENST00000463503 ECM2O94769 699 aaPredicted RBP14.1□□□□□ -0.15
SSR3-202ENST00000463503 GRK4P32298 578 aa14.1□□□□□ -0.15
SSR3-202ENST00000463503 NEXNQ0ZGT2 675 aa14.1□□□□□ -0.15
SSR3-202ENST00000463503 GCKRQ14397 625 aa14.1□□□□□ -0.15
SSR3-202ENST00000463503 TSPYL6Q8N831 410 aa14.1□□□□□ -0.15
SSR3-202ENST00000463503 FRMPD3Q5JV73 1810 aa14.1□□□□□ -0.15
SSR3-202ENST00000463503 PLXNB2O15031 1838 aa14.09□□□□□ -0.15
SSR3-202ENST00000463503 FARP2O94887 1054 aaPredicted RBP14.09□□□□□ -0.15
SSR3-202ENST00000463503 PSMC4P43686 418 aa14.09□□□□□ -0.15
SSR3-202ENST00000463503 PPIL2Q13356 520 aa14.09□□□□□ -0.15
SSR3-202ENST00000463503 MFSD14BQ5SR56 506 aa14.09□□□□□ -0.15
SSR3-202ENST00000463503 G2E3Q7L622 706 aa14.09□□□□□ -0.15
SSR3-202ENST00000463503 ERO1BQ86YB8 467 aa14.09□□□□□ -0.15
SSR3-202ENST00000463503 DZIP1LQ8IYY4 767 aaKnown RBP14.09□□□□□ -0.15
SSR3-202ENST00000463503 YTHDC1Q96MU7 727 aaKnown RBP14.09□□□□□ -0.15
SSR3-202ENST00000463503 TTF2Q9UNY4 1162 aaKnown RBP14.09□□□□□ -0.15
SSR3-202ENST00000463503 NR2E3Q9Y5X4 410 aa14.09□□□□□ -0.15
SSR3-202ENST00000463503 MYPNQ86TC9 1320 aa14.09□□□□□ -0.15
SSR3-202ENST00000463503 RPAP1Q9BWH6 1393 aaPredicted RBP14.09□□□□□ -0.15
SSR3-202ENST00000463503 WDHD1O75717 1129 aaPredicted RBP14.08□□□□□ -0.16
SSR3-202ENST00000463503 EXOSC9Q06265 439 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms