RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 MKRN3Q13064 507 aaKnown RBP27.62■■■□□ 2.01
PDLIM7-206ENST00000463411 DGKZQ13574 1117 aa27.62■■■□□ 2.01
PDLIM7-206ENST00000463411 MAP3K11Q16584 847 aa27.62■■■□□ 2.01
PDLIM7-206ENST00000463411 ATG9AQ7Z3C6 839 aa27.62■■■□□ 2.01
PDLIM7-206ENST00000463411 MEIS3Q99687 375 aa27.62■■■□□ 2.01
PDLIM7-206ENST00000463411 MCOLN1Q9GZU1 580 aa27.62■■■□□ 2.01
PDLIM7-206ENST00000463411 TDRD3Q9H7E2 651 aaKnown RBP27.62■■■□□ 2.01
PDLIM7-206ENST00000463411 GNAI3P08754 354 aa27.61■■■□□ 2.01
PDLIM7-206ENST00000463411 TNNI2P48788 182 aa27.61■■■□□ 2.01
PDLIM7-206ENST00000463411 INTS3Q68E01 1043 aaKnown RBP27.61■■■□□ 2.01
PDLIM7-206ENST00000463411 TEKT1Q969V4 418 aa27.61■■■□□ 2.01
PDLIM7-206ENST00000463411 CEP126Q9P2H0 1117 aa27.61■■■□□ 2.01
PDLIM7-206ENST00000463411 FZD1Q9UP38 647 aa27.61■■■□□ 2.01
PDLIM7-206ENST00000463411 SUGT1Q9Y2Z0 365 aa27.61■■■□□ 2.01
PDLIM7-206ENST00000463411 IREB2P48200 963 aaKnown RBP27.6■■■□□ 2.01
PDLIM7-206ENST00000463411 ATP2B3Q16720 1220 aa27.6■■■□□ 2.01
PDLIM7-206ENST00000463411 NBPF12Q5TAG4 269 aaPredicted RBP27.6■■■□□ 2.01
PDLIM7-206ENST00000463411 SLC10A4Q96EP9 437 aa27.6■■■□□ 2.01
PDLIM7-206ENST00000463411 UNCXA6NJT0 531 aa27.59■■■□□ 2.01
PDLIM7-206ENST00000463411 IL15P40933 162 aaPredicted RBP27.59■■■□□ 2.01
PDLIM7-206ENST00000463411 SPRYD7Q5W111 196 aa27.59■■■□□ 2.01
PDLIM7-206ENST00000463411 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.59■■■□□ 2.01
PDLIM7-206ENST00000463411 CCDC85CA6NKD9 419 aa27.58■■■□□ 2.01
PDLIM7-206ENST00000463411 TM4SF4P48230 202 aa27.58■■■□□ 2.01
PDLIM7-206ENST00000463411 HNRNPUQ00839 825 aaKnown RBP eCLIP27.58■■■□□ 2.01
PDLIM7-206ENST00000463411 GRIK5Q16478 980 aa27.58■■■□□ 2.01
PDLIM7-206ENST00000463411 WDR66Q8TBY9 1149 aa27.58■■■□□ 2.01
PDLIM7-206ENST00000463411 FRAT1Q92837 279 aaPredicted RBP27.58■■■□□ 2.01
PDLIM7-206ENST00000463411 GNL3LQ9NVN8 582 aaKnown RBP27.58■■■□□ 2.01
PDLIM7-206ENST00000463411 TCP10L2B9ZVM9 353 aa27.57■■■□□ 2
PDLIM7-206ENST00000463411 TMOD2Q9NZR1 351 aa27.57■■■□□ 2
PDLIM7-206ENST00000463411 LAMB1P07942 1786 aa27.57■■■□□ 2
PDLIM7-206ENST00000463411 OTOFQ9HC10 1997 aa27.57■■■□□ 2
PDLIM7-206ENST00000463411 ZBTB48P10074 688 aaPredicted RBP27.56■■■□□ 2
PDLIM7-206ENST00000463411 ATF7IPQ6VMQ6 1270 aa27.56■■■□□ 2
PDLIM7-206ENST00000463411 COPRSQ9NQ92 184 aa27.56■■■□□ 2
PDLIM7-206ENST00000463411 PA2G4Q9UQ80 394 aaKnown RBP27.56■■■□□ 2
PDLIM7-206ENST00000463411 MANSC4A6NHS7 340 aaPredicted RBP27.55■■■□□ 2
PDLIM7-206ENST00000463411 TRIM27P14373 513 aa27.55■■■□□ 2
PDLIM7-206ENST00000463411 ANKRD13AQ8IZ07 590 aa27.55■■■□□ 2
PDLIM7-206ENST00000463411 CLMNQ96JQ2 1002 aa27.55■■■□□ 2
PDLIM7-206ENST00000463411 ZDHHC15Q96MV8 337 aa27.55■■■□□ 2
PDLIM7-206ENST00000463411 MRIQ9BWK5 157 aa27.55■■■□□ 2
PDLIM7-206ENST00000463411 ZBED9Q6R2W3 1325 aa27.54■■■□□ 2
PDLIM7-206ENST00000463411 WNK4Q96J92 1243 aa27.54■■■□□ 2
PDLIM7-206ENST00000463411 SRGAP3O43295 1099 aa27.53■■■□□ 2
PDLIM7-206ENST00000463411 USP2O75604 605 aaPredicted RBP27.53■■■□□ 2
PDLIM7-206ENST00000463411 BCAR3O75815 825 aa27.53■■■□□ 2
PDLIM7-206ENST00000463411 TBC1D8O95759 1140 aa27.53■■■□□ 2
PDLIM7-206ENST00000463411 INHBEP58166 350 aa27.53■■■□□ 2
PDLIM7-206ENST00000463411 ALDH1A1P00352 501 aa27.52■■■□□ 2
PDLIM7-206ENST00000463411 HHIPL2Q6UWX4 724 aa27.52■■■□□ 2
PDLIM7-206ENST00000463411 TMEM39BQ9GZU3 492 aa27.52■■■□□ 2
PDLIM7-206ENST00000463411 SEMA3EO15041 775 aa27.51■■□□□ 1.99
PDLIM7-206ENST00000463411 MTX1Q13505 466 aa27.51■■□□□ 1.99
PDLIM7-206ENST00000463411 TEPSINQ96N21 525 aa27.51■■□□□ 1.99
PDLIM7-206ENST00000463411 GNAI2P04899 355 aa27.5■■□□□ 1.99
PDLIM7-206ENST00000463411 CTU1Q7Z7A3 348 aaKnown RBP27.5■■□□□ 1.99
PDLIM7-206ENST00000463411 CLUAP1Q96AJ1 413 aa27.5■■□□□ 1.99
PDLIM7-206ENST00000463411 DENND2AQ9ULE3 1009 aa27.5■■□□□ 1.99
PDLIM7-206ENST00000463411 CACNB3P54284 484 aa27.49■■□□□ 1.99
PDLIM7-206ENST00000463411 ZKSCAN2Q63HK3 967 aa27.49■■□□□ 1.99
PDLIM7-206ENST00000463411 HOOK2Q96ED9 719 aa27.49■■□□□ 1.99
PDLIM7-206ENST00000463411 AKAP2Q9Y2D5 859 aa27.49■■□□□ 1.99
PDLIM7-206ENST00000463411 LDHBP07195 334 aaKnown RBP27.48■■□□□ 1.99
PDLIM7-206ENST00000463411 PHKA1P46020 1223 aa27.48■■□□□ 1.99
PDLIM7-206ENST00000463411 NOM1Q5C9Z4 860 aaKnown RBP27.48■■□□□ 1.99
PDLIM7-206ENST00000463411 FKBP1CQ5VVH2 108 aa27.48■■□□□ 1.99
PDLIM7-206ENST00000463411 APOBEC3HQ6NTF7 200 aaKnown RBP27.48■■□□□ 1.99
PDLIM7-206ENST00000463411 FAM83AQ86UY5 434 aa27.48■■□□□ 1.99
PDLIM7-206ENST00000463411 CDAN1Q8IWY9 1227 aa27.48■■□□□ 1.99
PDLIM7-206ENST00000463411 ZNF296Q8WUU4 475 aaPredicted RBP27.48■■□□□ 1.99
PDLIM7-206ENST00000463411 CFHR5Q9BXR6 569 aa27.48■■□□□ 1.99
PDLIM7-206ENST00000463411 SALL1Q9NSC2 1324 aa27.47■■□□□ 1.99
PDLIM7-206ENST00000463411 ZGPATQ8N5A5 531 aaKnown RBP27.47■■□□□ 1.99
PDLIM7-206ENST00000463411 TNNQ9UQP3 1299 aa27.47■■□□□ 1.99
PDLIM7-206ENST00000463411 GPR25O00155 361 aa27.46■■□□□ 1.99
PDLIM7-206ENST00000463411 CCDC102BQ68D86 513 aa27.46■■□□□ 1.99
PDLIM7-206ENST00000463411 IFNL1Q8IU54 200 aa27.46■■□□□ 1.99
PDLIM7-206ENST00000463411 ELP3Q9H9T3 547 aa27.46■■□□□ 1.99
PDLIM7-206ENST00000463411 CSADQ9Y600 493 aa27.46■■□□□ 1.99
PDLIM7-206ENST00000463411 RPAP1Q9BWH6 1393 aaPredicted RBP27.46■■□□□ 1.99
PDLIM7-206ENST00000463411 PRDX5P30044 214 aa27.45■■□□□ 1.98
PDLIM7-206ENST00000463411 ADORA1P30542 326 aa27.45■■□□□ 1.98
PDLIM7-206ENST00000463411 OTUD7BQ6GQQ9 843 aa27.45■■□□□ 1.98
PDLIM7-206ENST00000463411 OPTNQ96CV9 577 aa27.45■■□□□ 1.98
PDLIM7-206ENST00000463411 ZBTB22O15209 634 aa27.44■■□□□ 1.98
PDLIM7-206ENST00000463411 MAP3K9P80192 1104 aa27.44■■□□□ 1.98
PDLIM7-206ENST00000463411 TFCP2Q12800 502 aa27.44■■□□□ 1.98
PDLIM7-206ENST00000463411 MVPQ14764 893 aaKnown RBP27.44■■□□□ 1.98
PDLIM7-206ENST00000463411 DAGLAQ9Y4D2 1042 aa27.44■■□□□ 1.98
PDLIM7-206ENST00000463411 A0A1B0GUL7 405 aa27.43■■□□□ 1.98
PDLIM7-206ENST00000463411 VGLL4Q14135 290 aa27.43■■□□□ 1.98
PDLIM7-206ENST00000463411 DIXDC1Q155Q3 683 aa27.43■■□□□ 1.98
PDLIM7-206ENST00000463411 PKN2Q16513 984 aaKnown RBP27.43■■□□□ 1.98
PDLIM7-206ENST00000463411 FTSJ3Q8IY81 847 aaKnown RBP27.43■■□□□ 1.98
PDLIM7-206ENST00000463411 TMEM57Q8N5G2 664 aa27.43■■□□□ 1.98
PDLIM7-206ENST00000463411 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.43■■□□□ 1.98
PDLIM7-206ENST00000463411 FKTNO75072 461 aa27.42■■□□□ 1.98
PDLIM7-206ENST00000463411 GJA5P36382 358 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms