RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 ARMT1Q9H993 441 aa12□□□□□ -0.49
MSH5-211ENST00000463144 TNRC6CQ9HCJ0 1690 aaKnown RBP12□□□□□ -0.49
MSH5-211ENST00000463144 EPB41L4AQ9HCS5 686 aaPredicted RBP12□□□□□ -0.49
MSH5-211ENST00000463144 EP400Q96L91 3159 aa12□□□□□ -0.49
MSH5-211ENST00000463144 FIBPO43427 364 aa12□□□□□ -0.49
MSH5-211ENST00000463144 MBD4O95243 580 aa12□□□□□ -0.49
MSH5-211ENST00000463144 MCM5P33992 734 aa12□□□□□ -0.49
MSH5-211ENST00000463144 ALX1Q15699 326 aa12□□□□□ -0.49
MSH5-211ENST00000463144 TRAPPC3LQ5T215 181 aa12□□□□□ -0.49
MSH5-211ENST00000463144 FAM84BQ96KN1 310 aaPredicted RBP12□□□□□ -0.49
MSH5-211ENST00000463144 SYCE3A1L190 88 aa11.99□□□□□ -0.49
MSH5-211ENST00000463144 PATL2C9JE40 543 aaKnown RBP11.99□□□□□ -0.49
MSH5-211ENST00000463144 KLRK1P26718 216 aa11.99□□□□□ -0.49
MSH5-211ENST00000463144 RFC4P35249 363 aa11.99□□□□□ -0.49
MSH5-211ENST00000463144 ZNF772Q68DY9 489 aaPredicted RBP11.99□□□□□ -0.49
MSH5-211ENST00000463144 CYB5R4Q7L1T6 521 aa11.99□□□□□ -0.49
MSH5-211ENST00000463144 INCENPQ9NQS7 918 aa11.99□□□□□ -0.49
MSH5-211ENST00000463144 TACC3Q9Y6A5 838 aa11.99□□□□□ -0.49
MSH5-211ENST00000463144 BRWD3Q6RI45 1802 aa11.99□□□□□ -0.49
MSH5-211ENST00000463144 SALL1Q9NSC2 1324 aa11.99□□□□□ -0.49
MSH5-211ENST00000463144 PTPDC1A2A3K4 754 aa11.99□□□□□ -0.49
MSH5-211ENST00000463144 GSG1L2A8MUP6 293 aa11.99□□□□□ -0.49
MSH5-211ENST00000463144 PRKAB2O43741 272 aa11.99□□□□□ -0.49
MSH5-211ENST00000463144 NFIXQ14938 502 aa11.99□□□□□ -0.49
MSH5-211ENST00000463144 ADGRA1Q86SQ6 560 aa11.99□□□□□ -0.49
MSH5-211ENST00000463144 IFNL3Q8IZI9 196 aa11.99□□□□□ -0.49
MSH5-211ENST00000463144 LCORLQ8N3X6 602 aa11.99□□□□□ -0.49
MSH5-211ENST00000463144 LRP2BPQ9P2M1 347 aa11.99□□□□□ -0.49
MSH5-211ENST00000463144 UBE2HP62256 183 aa11.98□□□□□ -0.49
MSH5-211ENST00000463144 RESTQ13127 1097 aa11.98□□□□□ -0.49
MSH5-211ENST00000463144 RBSNQ9H1K0 784 aa11.98□□□□□ -0.49
MSH5-211ENST00000463144 NAP1L2Q9ULW6 460 aaPredicted RBP11.98□□□□□ -0.49
MSH5-211ENST00000463144 HPS5Q9UPZ3 1129 aa11.98□□□□□ -0.49
MSH5-211ENST00000463144 UBR3Q6ZT12 1888 aa11.98□□□□□ -0.49
MSH5-211ENST00000463144 CACNA1SQ13698 1873 aa11.98□□□□□ -0.49
MSH5-211ENST00000463144 ZMYM6O95789 1325 aa11.98□□□□□ -0.49
MSH5-211ENST00000463144 WDR19Q8NEZ3 1342 aa11.98□□□□□ -0.49
MSH5-211ENST00000463144 PPFIA3O75145 1194 aa11.98□□□□□ -0.49
MSH5-211ENST00000463144 FDPSP14324 419 aaKnown RBP11.98□□□□□ -0.49
MSH5-211ENST00000463144 LRSAM1Q6UWE0 723 aa11.98□□□□□ -0.49
MSH5-211ENST00000463144 FBXO33Q7Z6M2 555 aa11.98□□□□□ -0.49
MSH5-211ENST00000463144 RALYLQ86SE5 291 aaKnown RBP11.98□□□□□ -0.49
MSH5-211ENST00000463144 TTC6Q86TZ1 520 aa11.98□□□□□ -0.49
MSH5-211ENST00000463144 SLC51AQ86UW1 340 aa11.98□□□□□ -0.49
MSH5-211ENST00000463144 MIGA1Q8NAN2 632 aa11.98□□□□□ -0.49
MSH5-211ENST00000463144 NEDD4P46934 1319 aa11.97□□□□□ -0.49
MSH5-211ENST00000463144 TPRNQ4KMQ1 711 aa11.97□□□□□ -0.49
MSH5-211ENST00000463144 CAVIN4Q5BKX8 364 aa11.97□□□□□ -0.49
MSH5-211ENST00000463144 CHD4Q14839 1912 aa11.97□□□□□ -0.49
MSH5-211ENST00000463144 PNPLA7Q6ZV29 1317 aa11.97□□□□□ -0.49
MSH5-211ENST00000463144 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.97□□□□□ -0.49
MSH5-211ENST00000463144 KLF18A0A0U1RQI7 1052 aa11.97□□□□□ -0.49
MSH5-211ENST00000463144 B4E1Z4 1266 aa11.97□□□□□ -0.49
MSH5-211ENST00000463144 CYP7A1P22680 504 aa11.97□□□□□ -0.49
MSH5-211ENST00000463144 HMGN5P82970 282 aaKnown RBP11.97□□□□□ -0.49
MSH5-211ENST00000463144 CTDSPL2Q05D32 466 aa11.97□□□□□ -0.49
MSH5-211ENST00000463144 FAM184AQ8NB25 1140 aa11.97□□□□□ -0.49
MSH5-211ENST00000463144 ZNF384Q8TF68 577 aa11.97□□□□□ -0.49
MSH5-211ENST00000463144 GNL3LQ9NVN8 582 aaKnown RBP11.97□□□□□ -0.49
MSH5-211ENST00000463144 TFIP11Q9UBB9 837 aaKnown RBP11.97□□□□□ -0.49
MSH5-211ENST00000463144 ABCF2Q9UG63 623 aa11.97□□□□□ -0.49
MSH5-211ENST00000463144 KRT85P78386 507 aa11.96□□□□□ -0.49
MSH5-211ENST00000463144 RAB11FIP4Q86YS3 637 aa11.96□□□□□ -0.49
MSH5-211ENST00000463144 NAPBQ9H115 298 aa11.96□□□□□ -0.49
MSH5-211ENST00000463144 SENP2Q9HC62 589 aa11.96□□□□□ -0.49
MSH5-211ENST00000463144 SLC4A4Q9Y6R1 1079 aa11.96□□□□□ -0.49
MSH5-211ENST00000463144 CARMIL3Q8ND23 1372 aa11.96□□□□□ -0.5
MSH5-211ENST00000463144 IRS2Q9Y4H2 1338 aa11.96□□□□□ -0.5
MSH5-211ENST00000463144 TIAM2Q8IVF5 1701 aa11.95□□□□□ -0.5
MSH5-211ENST00000463144 FOSBP53539 338 aa11.95□□□□□ -0.5
MSH5-211ENST00000463144 TRDNQ13061 729 aa11.95□□□□□ -0.5
MSH5-211ENST00000463144 TXNRD3Q86VQ6 643 aa11.95□□□□□ -0.5
MSH5-211ENST00000463144 IGDCC4Q8TDY8 1250 aa11.95□□□□□ -0.5
MSH5-211ENST00000463144 TFCP2L1Q9NZI6 479 aa11.95□□□□□ -0.5
MSH5-211ENST00000463144 MYH15Q9Y2K3 1946 aa11.95□□□□□ -0.5
MSH5-211ENST00000463144 H3BQV1 296 aa11.95□□□□□ -0.5
MSH5-211ENST00000463144 SH2B2O14492 632 aaPredicted RBP11.95□□□□□ -0.5
MSH5-211ENST00000463144 ADRA2BP18089 450 aa11.95□□□□□ -0.5
MSH5-211ENST00000463144 CSPP1Q1MSJ5 1256 aa11.95□□□□□ -0.5
MSH5-211ENST00000463144 IFFO2Q5TF58 517 aa11.95□□□□□ -0.5
MSH5-211ENST00000463144 NAA16Q6N069 864 aaPredicted RBP11.95□□□□□ -0.5
MSH5-211ENST00000463144 VPS37DQ86XT2 251 aa11.95□□□□□ -0.5
MSH5-211ENST00000463144 SYAP1Q96A49 352 aaPredicted RBP11.95□□□□□ -0.5
MSH5-211ENST00000463144 ANKRD2Q9GZV1 360 aa11.95□□□□□ -0.5
MSH5-211ENST00000463144 ELP1O95163 1332 aa11.95□□□□□ -0.5
MSH5-211ENST00000463144 MYH13Q9UKX3 1938 aa11.95□□□□□ -0.5
MSH5-211ENST00000463144 GOLGA8BA8MQT2 603 aa11.94□□□□□ -0.5
MSH5-211ENST00000463144 TRIM37O94972 964 aa11.94□□□□□ -0.5
MSH5-211ENST00000463144 GYS1P13807 737 aa11.94□□□□□ -0.5
MSH5-211ENST00000463144 GNAT2P19087 354 aa11.94□□□□□ -0.5
MSH5-211ENST00000463144 ADD1P35611 737 aaKnown RBP11.94□□□□□ -0.5
MSH5-211ENST00000463144 NASPP49321 788 aaPredicted RBP11.94□□□□□ -0.5
MSH5-211ENST00000463144 KRT27Q7Z3Y8 459 aa11.94□□□□□ -0.5
MSH5-211ENST00000463144 LEO1Q8WVC0 666 aaPredicted RBP11.94□□□□□ -0.5
MSH5-211ENST00000463144 RIOK1Q9BRS2 568 aaKnown RBP11.94□□□□□ -0.5
MSH5-211ENST00000463144 RAI14Q9P0K7 980 aa11.94□□□□□ -0.5
MSH5-211ENST00000463144 ZSWIM5Q9P217 1185 aa11.94□□□□□ -0.5
MSH5-211ENST00000463144 RGS17Q9UGC6 210 aaPredicted RBP11.94□□□□□ -0.5
MSH5-211ENST00000463144 ANGEL1Q9UNK9 670 aaKnown RBP11.94□□□□□ -0.5
MSH5-211ENST00000463144 HIBADHP31937 336 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms