RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	MYCN	P04198	464 aa	Predicted RBP	11.81	□□□□□ -0.52
PSMD4-208	ENST00000462970	LDHB	P07195	334 aa	Known RBP	11.81	□□□□□ -0.52
PSMD4-208	ENST00000462970	RASGRF1	Q13972	1273 aa		11.81	□□□□□ -0.52
PSMD4-208	ENST00000462970	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.81	□□□□□ -0.52
PSMD4-208	ENST00000462970	AACS	Q86V21	672 aa		11.81	□□□□□ -0.52
PSMD4-208	ENST00000462970	VEZT	Q9HBM0	779 aa		11.81	□□□□□ -0.52
PSMD4-208	ENST00000462970	SNRK	Q9NRH2	765 aa		11.81	□□□□□ -0.52
PSMD4-208	ENST00000462970	ABCF2	Q9UG63	623 aa		11.81	□□□□□ -0.52
PSMD4-208	ENST00000462970	PGAP2	Q9UHJ9	254 aa		11.81	□□□□□ -0.52
PSMD4-208	ENST00000462970	MYH2	Q9UKX2	1941 aa		11.8	□□□□□ -0.52
PSMD4-208	ENST00000462970	UQCRFS1P1	P0C7P4	283 aa		11.8	□□□□□ -0.52
PSMD4-208	ENST00000462970	CRK	P46108	304 aa		11.8	□□□□□ -0.52
PSMD4-208	ENST00000462970	MMP14	P50281	582 aa		11.8	□□□□□ -0.52
PSMD4-208	ENST00000462970	GRM1	Q13255	1194 aa		11.8	□□□□□ -0.52
PSMD4-208	ENST00000462970	CCDC158	Q5M9N0	1113 aa		11.8	□□□□□ -0.52
PSMD4-208	ENST00000462970	PRAMEF18	Q5VWM3	479 aa		11.8	□□□□□ -0.52
PSMD4-208	ENST00000462970	PI16	Q6UXB8	463 aa		11.8	□□□□□ -0.52
PSMD4-208	ENST00000462970	TEKT1	Q969V4	418 aa		11.8	□□□□□ -0.52
PSMD4-208	ENST00000462970	GPR108	Q9NPR9	543 aa		11.8	□□□□□ -0.52
PSMD4-208	ENST00000462970	CREBZF	Q9NS37	354 aa		11.8	□□□□□ -0.52
PSMD4-208	ENST00000462970	TLR7	Q9NYK1	1049 aa	Known RBP	11.8	□□□□□ -0.52
PSMD4-208	ENST00000462970	MAST3	O60307	1309 aa		11.8	□□□□□ -0.52
PSMD4-208	ENST00000462970	AK9	Q5TCS8	1911 aa		11.8	□□□□□ -0.52
PSMD4-208	ENST00000462970	SPDYE2B	A6NHP3	402 aa		11.79	□□□□□ -0.52
PSMD4-208	ENST00000462970	SPDYE6	P0CI01	402 aa		11.79	□□□□□ -0.52
PSMD4-208	ENST00000462970	PRDX5	P30044	214 aa		11.79	□□□□□ -0.52
PSMD4-208	ENST00000462970	IRX6	P78412	446 aa	Predicted RBP	11.79	□□□□□ -0.52
PSMD4-208	ENST00000462970	DZIP1	Q86YF9	867 aa	Known RBP	11.79	□□□□□ -0.52
PSMD4-208	ENST00000462970	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.79	□□□□□ -0.52
PSMD4-208	ENST00000462970	CLASRP	Q8N2M8	674 aa	Known RBP	11.79	□□□□□ -0.52
PSMD4-208	ENST00000462970	RHPN1	Q8TCX5	695 aa		11.79	□□□□□ -0.52
PSMD4-208	ENST00000462970	EAF2	Q96CJ1	260 aa	Predicted RBP	11.79	□□□□□ -0.52
PSMD4-208	ENST00000462970	KIF1BP	Q96EK5	621 aa		11.79	□□□□□ -0.52
PSMD4-208	ENST00000462970	CDCA5	Q96FF9	252 aa		11.79	□□□□□ -0.52
PSMD4-208	ENST00000462970	PRMT6	Q96LA8	375 aa	Predicted RBP	11.79	□□□□□ -0.52
PSMD4-208	ENST00000462970	TDRD3	Q9H7E2	651 aa	Known RBP	11.79	□□□□□ -0.52
PSMD4-208	ENST00000462970	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.79	□□□□□ -0.52
PSMD4-208	ENST00000462970	SERPINA10	Q9UK55	444 aa		11.79	□□□□□ -0.52
PSMD4-208	ENST00000462970	AOX1	Q06278	1338 aa		11.79	□□□□□ -0.52
PSMD4-208	ENST00000462970	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.78	□□□□□ -0.52
PSMD4-208	ENST00000462970	RAB11FIP3	O75154	756 aa		11.78	□□□□□ -0.52
PSMD4-208	ENST00000462970	IFIT2	P09913	472 aa	Known RBP	11.78	□□□□□ -0.52
PSMD4-208	ENST00000462970	HSPA1A	P0DMV8	641 aa	Known RBP	11.78	□□□□□ -0.52
PSMD4-208	ENST00000462970	HSPA1B	P0DMV9	641 aa	Known RBP	11.78	□□□□□ -0.52
PSMD4-208	ENST00000462970	TTLL12	Q14166	644 aa	Predicted RBP	11.78	□□□□□ -0.52
PSMD4-208	ENST00000462970	DIXDC1	Q155Q3	683 aa		11.78	□□□□□ -0.52
PSMD4-208	ENST00000462970	CST9	Q5W186	159 aa		11.78	□□□□□ -0.52
PSMD4-208	ENST00000462970	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.78	□□□□□ -0.52
PSMD4-208	ENST00000462970	ZGPAT	Q8N5A5	531 aa	Known RBP	11.78	□□□□□ -0.52
PSMD4-208	ENST00000462970	SPATA5	Q8NB90	893 aa		11.78	□□□□□ -0.52
PSMD4-208	ENST00000462970	RAI14	Q9P0K7	980 aa		11.78	□□□□□ -0.52
PSMD4-208	ENST00000462970	HMG20B	Q9P0W2	317 aa		11.78	□□□□□ -0.52
PSMD4-208	ENST00000462970	DBNL	Q9UJU6	430 aa	Known RBP	11.78	□□□□□ -0.52
PSMD4-208	ENST00000462970	PITPNM2	Q9BZ72	1349 aa		11.78	□□□□□ -0.52
PSMD4-208	ENST00000462970	AKAP11	Q9UKA4	1901 aa		11.78	□□□□□ -0.52
PSMD4-208	ENST00000462970	TCP10L2	B9ZVM9	353 aa		11.77	□□□□□ -0.53
PSMD4-208	ENST00000462970	SMARCA5	O60264	1052 aa	Predicted RBP	11.77	□□□□□ -0.53
PSMD4-208	ENST00000462970	ARID4A	P29374	1257 aa	Predicted RBP	11.77	□□□□□ -0.53
PSMD4-208	ENST00000462970	MCAM	P43121	646 aa		11.77	□□□□□ -0.53
PSMD4-208	ENST00000462970	PRKG1	Q13976	671 aa		11.77	□□□□□ -0.53
PSMD4-208	ENST00000462970	TBC1D9	Q6ZT07	1266 aa		11.77	□□□□□ -0.53
PSMD4-208	ENST00000462970	ERICH6	Q7L0X2	663 aa		11.77	□□□□□ -0.53
PSMD4-208	ENST00000462970	C2orf69	Q8N8R5	385 aa		11.77	□□□□□ -0.53
PSMD4-208	ENST00000462970	MTMR14	Q8NCE2	650 aa		11.77	□□□□□ -0.53
PSMD4-208	ENST00000462970	ZBED3	Q96IU2	234 aa	Predicted RBP	11.77	□□□□□ -0.53
PSMD4-208	ENST00000462970	TMOD2	Q9NZR1	351 aa		11.77	□□□□□ -0.53
PSMD4-208	ENST00000462970	LRP2BP	Q9P2M1	347 aa		11.77	□□□□□ -0.53
PSMD4-208	ENST00000462970	ZNF70	Q9UC06	446 aa	Predicted RBP	11.77	□□□□□ -0.53
PSMD4-208	ENST00000462970	SUGT1	Q9Y2Z0	365 aa		11.77	□□□□□ -0.53
PSMD4-208	ENST00000462970	PCDHB15	Q9Y5E8	787 aa		11.77	□□□□□ -0.53
PSMD4-208	ENST00000462970	NF2	P35240	595 aa		11.76	□□□□□ -0.53
PSMD4-208	ENST00000462970	CACNB3	P54284	484 aa		11.76	□□□□□ -0.53
PSMD4-208	ENST00000462970	DEFB115	Q30KQ5	88 aa		11.76	□□□□□ -0.53
PSMD4-208	ENST00000462970	EXOC6	Q8TAG9	804 aa		11.76	□□□□□ -0.53
PSMD4-208	ENST00000462970	LRRCC1	Q9C099	1032 aa		11.76	□□□□□ -0.53
PSMD4-208	ENST00000462970	GBA2	Q9HCG7	927 aa	Predicted RBP	11.76	□□□□□ -0.53
PSMD4-208	ENST00000462970	SALL1	Q9NSC2	1324 aa		11.76	□□□□□ -0.53
PSMD4-208	ENST00000462970	CAPN15	O75808	1086 aa		11.75	□□□□□ -0.53
PSMD4-208	ENST00000462970	ZAP70	P43403	619 aa		11.75	□□□□□ -0.53
PSMD4-208	ENST00000462970	HUNK	P57058	714 aa		11.75	□□□□□ -0.53
PSMD4-208	ENST00000462970	HDLBP	Q00341	1268 aa	Known RBP	11.75	□□□□□ -0.53
PSMD4-208	ENST00000462970	SPDYE2	Q495Y8	402 aa		11.75	□□□□□ -0.53
PSMD4-208	ENST00000462970	HHIPL2	Q6UWX4	724 aa		11.75	□□□□□ -0.53
PSMD4-208	ENST00000462970	DEFB129	Q9H1M3	183 aa		11.75	□□□□□ -0.53
PSMD4-208	ENST00000462970	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.75	□□□□□ -0.53
PSMD4-208	ENST00000462970	DAGLA	Q9Y4D2	1042 aa		11.75	□□□□□ -0.53
PSMD4-208	ENST00000462970	NDUFB9	Q9Y6M9	179 aa		11.75	□□□□□ -0.53
PSMD4-208	ENST00000462970	PDS5A	Q29RF7	1337 aa	Known RBP	11.75	□□□□□ -0.53
PSMD4-208	ENST00000462970	TNNI2	P48788	182 aa		11.74	□□□□□ -0.53
PSMD4-208	ENST00000462970	MECOM	Q03112	1051 aa		11.74	□□□□□ -0.53
PSMD4-208	ENST00000462970	TNFAIP1	Q13829	316 aa		11.74	□□□□□ -0.53
PSMD4-208	ENST00000462970	RASA3	Q14644	834 aa		11.74	□□□□□ -0.53
PSMD4-208	ENST00000462970	SLF2	Q8IX21	1173 aa		11.74	□□□□□ -0.53
PSMD4-208	ENST00000462970	ZDHHC15	Q96MV8	337 aa		11.74	□□□□□ -0.53
PSMD4-208	ENST00000462970	DNAJC2	Q99543	621 aa	Known RBP	11.74	□□□□□ -0.53
PSMD4-208	ENST00000462970	DCTPP1	Q9H773	170 aa		11.74	□□□□□ -0.53
PSMD4-208	ENST00000462970	USP40	Q9NVE5	1235 aa		11.74	□□□□□ -0.53
PSMD4-208	ENST00000462970	TLL2	Q9Y6L7	1015 aa		11.74	□□□□□ -0.53
PSMD4-208	ENST00000462970	CNTNAP1	P78357	1384 aa		11.74	□□□□□ -0.53
PSMD4-208	ENST00000462970	VEGFB	P49765	207 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms