RNA–Protein interactions for RNA: ENST00000462321.1

PTPN18-207, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,717 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-207ENST00000462321 ECE2O60344 883 aa23.83■■□□□ 1.41
PTPN18-207ENST00000462321 GTF2IP78347 998 aa23.83■■□□□ 1.41
PTPN18-207ENST00000462321 MFSD14BQ5SR56 506 aa23.83■■□□□ 1.41
PTPN18-207ENST00000462321 DZIP1Q86YF9 867 aaKnown RBP23.83■■□□□ 1.41
PTPN18-207ENST00000462321 ZNF384Q8TF68 577 aa23.83■■□□□ 1.41
PTPN18-207ENST00000462321 IL17RAQ96F46 866 aa23.83■■□□□ 1.41
PTPN18-207ENST00000462321 BCS1LQ9Y276 419 aa23.83■■□□□ 1.41
PTPN18-207ENST00000462321 HSPD1P10809 573 aaKnown RBP23.82■■□□□ 1.4
PTPN18-207ENST00000462321 NECTIN1Q15223 517 aa23.82■■□□□ 1.4
PTPN18-207ENST00000462321 VPS53Q5VIR6 699 aa23.82■■□□□ 1.4
PTPN18-207ENST00000462321 U3KPZ7 1027 aaPredicted RBP23.82■■□□□ 1.4
PTPN18-207ENST00000462321 PALD1Q9ULE6 856 aa23.81■■□□□ 1.4
PTPN18-207ENST00000462321 SUGT1Q9Y2Z0 365 aa23.81■■□□□ 1.4
PTPN18-207ENST00000462321 MBD4O95243 580 aa23.81■■□□□ 1.4
PTPN18-207ENST00000462321 TTLL5Q6EMB2 1281 aa23.81■■□□□ 1.4
PTPN18-207ENST00000462321 ADGRA1Q86SQ6 560 aa23.81■■□□□ 1.4
PTPN18-207ENST00000462321 KCNB2Q92953 911 aa23.81■■□□□ 1.4
PTPN18-207ENST00000462321 FHDC1Q9C0D6 1143 aaPredicted RBP23.81■■□□□ 1.4
PTPN18-207ENST00000462321 GSTO1P78417 241 aa23.8■■□□□ 1.4
PTPN18-207ENST00000462321 STRBPQ96SI9 672 aaKnown RBP23.8■■□□□ 1.4
PTPN18-207ENST00000462321 TAOK3Q9H2K8 898 aa23.8■■□□□ 1.4
PTPN18-207ENST00000462321 GRIK5Q16478 980 aa23.79■■□□□ 1.4
PTPN18-207ENST00000462321 FBXW7Q969H0 707 aa23.79■■□□□ 1.4
PTPN18-207ENST00000462321 DDRGK1Q96HY6 314 aa23.79■■□□□ 1.4
PTPN18-207ENST00000462321 ZNF277Q9NRM2 450 aaPredicted RBP23.79■■□□□ 1.4
PTPN18-207ENST00000462321 FOXP2O15409 715 aa23.79■■□□□ 1.4
PTPN18-207ENST00000462321 FKBP1AP62942 108 aaKnown RBP23.79■■□□□ 1.4
PTPN18-207ENST00000462321 RABEP1Q15276 862 aa23.79■■□□□ 1.4
PTPN18-207ENST00000462321 STRIP1Q5VSL9 837 aa23.79■■□□□ 1.4
PTPN18-207ENST00000462321 RNF20Q5VTR2 975 aa23.79■■□□□ 1.4
PTPN18-207ENST00000462321 CREB3L3Q68CJ9 461 aa23.79■■□□□ 1.4
PTPN18-207ENST00000462321 MIGA1Q8NAN2 632 aa23.79■■□□□ 1.4
PTPN18-207ENST00000462321 CHD4Q14839 1912 aa23.78■■□□□ 1.4
PTPN18-207ENST00000462321 MAGEB6P1A0A0J9YX57 407 aa23.78■■□□□ 1.4
PTPN18-207ENST00000462321 GNAT2P19087 354 aa23.78■■□□□ 1.4
PTPN18-207ENST00000462321 LCORLQ8N3X6 602 aa23.78■■□□□ 1.4
PTPN18-207ENST00000462321 LARGE2Q8N3Y3 721 aa23.78■■□□□ 1.4
PTPN18-207ENST00000462321 RIOK1Q9BRS2 568 aaKnown RBP23.78■■□□□ 1.4
PTPN18-207ENST00000462321 ARMT1Q9H993 441 aa23.78■■□□□ 1.4
PTPN18-207ENST00000462321 LTBP3Q9NS15 1303 aa23.78■■□□□ 1.4
PTPN18-207ENST00000462321 SLC27A2O14975 620 aa23.77■■□□□ 1.4
PTPN18-207ENST00000462321 ZKSCAN1P17029 563 aaPredicted RBP23.77■■□□□ 1.4
PTPN18-207ENST00000462321 IARSP41252 1262 aaKnown RBP23.77■■□□□ 1.4
PTPN18-207ENST00000462321 SNX14Q9Y5W7 946 aa23.77■■□□□ 1.4
PTPN18-207ENST00000462321 FER1L6Q2WGJ9 1857 aa23.77■■□□□ 1.4
PTPN18-207ENST00000462321 CCDC88AQ3V6T2 1871 aa23.77■■□□□ 1.4
PTPN18-207ENST00000462321 USP17L3A6NCW0 530 aa23.76■■□□□ 1.39
PTPN18-207ENST00000462321 USP17L4A6NCW7 530 aa23.76■■□□□ 1.39
PTPN18-207ENST00000462321 NFKBIEO00221 500 aa23.76■■□□□ 1.39
PTPN18-207ENST00000462321 USP17L1Q7RTZ2 530 aa23.76■■□□□ 1.39
PTPN18-207ENST00000462321 RASEFQ8IZ41 740 aa23.76■■□□□ 1.39
PTPN18-207ENST00000462321 CERS5Q8N5B7 392 aa23.76■■□□□ 1.39
PTPN18-207ENST00000462321 LDHCP07864 332 aa23.76■■□□□ 1.39
PTPN18-207ENST00000462321 SLF2Q8IX21 1173 aa23.76■■□□□ 1.39
PTPN18-207ENST00000462321 CTNNA3Q9UI47 895 aa23.76■■□□□ 1.39
PTPN18-207ENST00000462321 RPAP1Q9BWH6 1393 aaPredicted RBP23.76■■□□□ 1.39
PTPN18-207ENST00000462321 ARFGEF1Q9Y6D6 1849 aa23.75■■□□□ 1.39
PTPN18-207ENST00000462321 MROH7-TTC4A0A0A0MT08 1334 aa23.75■■□□□ 1.39
PTPN18-207ENST00000462321 ZMYM6O95789 1325 aa23.75■■□□□ 1.39
PTPN18-207ENST00000462321 DACT2Q5SW24 774 aa23.75■■□□□ 1.39
PTPN18-207ENST00000462321 KCNQ5Q9NR82 932 aa23.75■■□□□ 1.39
PTPN18-207ENST00000462321 YDJCA8MPS7 323 aa23.74■■□□□ 1.39
PTPN18-207ENST00000462321 PATL2C9JE40 543 aaKnown RBP23.74■■□□□ 1.39
PTPN18-207ENST00000462321 DIXDC1Q155Q3 683 aa23.74■■□□□ 1.39
PTPN18-207ENST00000462321 TSGA10IPQ3SY00 556 aa23.74■■□□□ 1.39
PTPN18-207ENST00000462321 NIM1KQ8IY84 436 aa23.74■■□□□ 1.39
PTPN18-207ENST00000462321 GOLGB1Q14789 3259 aaKnown RBP23.74■■□□□ 1.39
PTPN18-207ENST00000462321 COL4A5P29400 1685 aa23.74■■□□□ 1.39
PTPN18-207ENST00000462321 FAM163AQ96GL9 167 aaPredicted RBP23.73■■□□□ 1.39
PTPN18-207ENST00000462321 SYT17Q9BSW7 474 aa23.73■■□□□ 1.39
PTPN18-207ENST00000462321 SCN9AQ15858 1988 aa23.73■■□□□ 1.39
PTPN18-207ENST00000462321 FGAP02671 866 aa23.73■■□□□ 1.39
PTPN18-207ENST00000462321 DYNLL1P63167 89 aaKnown RBP23.73■■□□□ 1.39
PTPN18-207ENST00000462321 ALX1Q15699 326 aa23.73■■□□□ 1.39
PTPN18-207ENST00000462321 CERS3Q8IU89 383 aa23.73■■□□□ 1.39
PTPN18-207ENST00000462321 IPO9Q96P70 1041 aaKnown RBP23.73■■□□□ 1.39
PTPN18-207ENST00000462321 AATFQ9NY61 560 aaKnown RBP eCLIP23.73■■□□□ 1.39
PTPN18-207ENST00000462321 SLC4A4Q9Y6R1 1079 aa23.73■■□□□ 1.39
PTPN18-207ENST00000462321 GAKO14976 1311 aa23.72■■□□□ 1.39
PTPN18-207ENST00000462321 APPP05067 770 aa23.72■■□□□ 1.39
PTPN18-207ENST00000462321 CYP21A2P08686 494 aa23.72■■□□□ 1.39
PTPN18-207ENST00000462321 IL27Q8NEV9 243 aa23.72■■□□□ 1.39
PTPN18-207ENST00000462321 MXD3Q9BW11 206 aa23.72■■□□□ 1.39
PTPN18-207ENST00000462321 ZNF646O15015 1829 aaPredicted RBP23.72■■□□□ 1.39
PTPN18-207ENST00000462321 GSG1L2A8MUP6 293 aa23.71■■□□□ 1.39
PTPN18-207ENST00000462321 BAG3O95817 575 aa23.71■■□□□ 1.39
PTPN18-207ENST00000462321 PPP4CP60510 307 aa23.71■■□□□ 1.39
PTPN18-207ENST00000462321 NOL10Q9BSC4 688 aaKnown RBP23.71■■□□□ 1.39
PTPN18-207ENST00000462321 NACAP1Q9BZK3 213 aa23.71■■□□□ 1.39
PTPN18-207ENST00000462321 EPB41L4AQ9HCS5 686 aaPredicted RBP23.71■■□□□ 1.39
PTPN18-207ENST00000462321 ZNRF3Q9ULT6 936 aa23.71■■□□□ 1.39
PTPN18-207ENST00000462321 TTF2Q9UNY4 1162 aaKnown RBP23.71■■□□□ 1.39
PTPN18-207ENST00000462321 PRKAB2O43741 272 aa23.7■■□□□ 1.39
PTPN18-207ENST00000462321 KRT32Q14532 448 aa23.7■■□□□ 1.39
PTPN18-207ENST00000462321 IMMTQ16891 758 aaKnown RBP23.7■■□□□ 1.39
PTPN18-207ENST00000462321 TM6SF1Q9BZW5 370 aa23.7■■□□□ 1.39
PTPN18-207ENST00000462321 GPR75-ASB3A0A0A6YYF3 556 aa23.7■■□□□ 1.38
PTPN18-207ENST00000462321 IFNL3Q8IZI9 196 aa23.7■■□□□ 1.38
PTPN18-207ENST00000462321 SNX21Q969T3 373 aa23.7■■□□□ 1.38
PTPN18-207ENST00000462321 CRNKL1Q9BZJ0 848 aaKnown RBP23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms