RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 NID1P14543 1247 aa4.83□□□□□ -1.64
VCL-203ENST00000461383 PTPRAP18433 802 aa4.83□□□□□ -1.64
VCL-203ENST00000461383 ITPKAP23677 461 aa4.83□□□□□ -1.64
VCL-203ENST00000461383 EIF4A3P38919 411 aaKnown RBP4.83□□□□□ -1.64
VCL-203ENST00000461383 ADH7P40394 386 aa4.83□□□□□ -1.64
VCL-203ENST00000461383 LIG3P49916 1009 aa4.83□□□□□ -1.64
VCL-203ENST00000461383 ZNF157P51786 506 aaPredicted RBP4.83□□□□□ -1.64
VCL-203ENST00000461383 RSPO4Q2I0M5 234 aaPredicted RBP4.83□□□□□ -1.64
VCL-203ENST00000461383 NKAPLQ5M9Q1 402 aa4.83□□□□□ -1.64
VCL-203ENST00000461383 SNAP47Q5SQN1 464 aa4.83□□□□□ -1.64
VCL-203ENST00000461383 C20orf204Q6ZNR8 217 aa4.83□□□□□ -1.64
VCL-203ENST00000461383 DDX54Q8TDD1 881 aaKnown RBP4.83□□□□□ -1.64
VCL-203ENST00000461383 BSNDQ8WZ55 320 aa4.83□□□□□ -1.64
VCL-203ENST00000461383 PLD4Q96BZ4 506 aa4.83□□□□□ -1.64
VCL-203ENST00000461383 TMEM74Q96NL1 305 aa4.83□□□□□ -1.64
VCL-203ENST00000461383 SMG9Q9H0W8 520 aaKnown RBP4.83□□□□□ -1.64
VCL-203ENST00000461383 CLEC4MQ9H2X3 399 aaPredicted RBP4.83□□□□□ -1.64
VCL-203ENST00000461383 ZNF576Q9H609 170 aa4.83□□□□□ -1.64
VCL-203ENST00000461383 SLC6A14Q9UN76 642 aa4.83□□□□□ -1.64
VCL-203ENST00000461383 NFKBIEO00221 500 aa4.82□□□□□ -1.64
VCL-203ENST00000461383 STK10O94804 968 aaKnown RBP4.82□□□□□ -1.64
VCL-203ENST00000461383 ALBP02768 609 aa4.82□□□□□ -1.64
VCL-203ENST00000461383 SSBP05455 408 aaKnown RBP eCLIP4.82□□□□□ -1.64
VCL-203ENST00000461383 CABP4P57796 275 aa4.82□□□□□ -1.64
VCL-203ENST00000461383 DOC2BQ14184 412 aa4.82□□□□□ -1.64
VCL-203ENST00000461383 PRRT3Q5FWE3 981 aa4.82□□□□□ -1.64
VCL-203ENST00000461383 RPS26P11Q5JNZ5 115 aaPredicted RBP4.82□□□□□ -1.64
VCL-203ENST00000461383 TTBK2Q6IQ55 1244 aa4.82□□□□□ -1.64
VCL-203ENST00000461383 ANKRD24Q8TF21 1146 aa4.82□□□□□ -1.64
VCL-203ENST00000461383 DHX38Q92620 1227 aaKnown RBP4.82□□□□□ -1.64
VCL-203ENST00000461383 SPATA32Q96LK8 384 aa4.82□□□□□ -1.64
VCL-203ENST00000461383 NACC1Q96RE7 527 aa4.82□□□□□ -1.64
VCL-203ENST00000461383 DNAJC2Q99543 621 aaKnown RBP4.82□□□□□ -1.64
VCL-203ENST00000461383 POP1Q99575 1024 aaKnown RBP4.82□□□□□ -1.64
VCL-203ENST00000461383 LACRTQ9GZZ8 138 aa4.82□□□□□ -1.64
VCL-203ENST00000461383 MUC3BQ9H195 1237 aa4.82□□□□□ -1.64
VCL-203ENST00000461383 SEC31BQ9NQW1 1179 aa4.82□□□□□ -1.64
VCL-203ENST00000461383 TMEM39AQ9NV64 488 aa4.82□□□□□ -1.64
VCL-203ENST00000461383 SUPT16HQ9Y5B9 1047 aaKnown RBP4.82□□□□□ -1.64
VCL-203ENST00000461383 M0R082 166 aa4.81□□□□□ -1.64
VCL-203ENST00000461383 GJA8P48165 433 aa4.81□□□□□ -1.64
VCL-203ENST00000461383 FAM160A1Q05DH4 1040 aa4.81□□□□□ -1.64
VCL-203ENST00000461383 PCDH1Q08174 1060 aa4.81□□□□□ -1.64
VCL-203ENST00000461383 PERM1Q5SV97 790 aa4.81□□□□□ -1.64
VCL-203ENST00000461383 GDF6Q6KF10 455 aaPredicted RBP4.81□□□□□ -1.64
VCL-203ENST00000461383 ZNF417Q8TAU3 575 aa4.81□□□□□ -1.64
VCL-203ENST00000461383 ZNF296Q8WUU4 475 aaPredicted RBP4.81□□□□□ -1.64
VCL-203ENST00000461383 NECAB3Q96P71 396 aaPredicted RBP4.81□□□□□ -1.64
VCL-203ENST00000461383 ZNF587Q96SQ5 575 aaPredicted RBP4.81□□□□□ -1.64
VCL-203ENST00000461383 CBX8Q9HC52 389 aa4.81□□□□□ -1.64
VCL-203ENST00000461383 TLR6Q9Y2C9 796 aa4.81□□□□□ -1.64
VCL-203ENST00000461383 ENC1O14682 589 aa4.8□□□□□ -1.64
VCL-203ENST00000461383 RGS9O75916 674 aaPredicted RBP4.8□□□□□ -1.64
VCL-203ENST00000461383 APBA3O96018 575 aa4.8□□□□□ -1.64
VCL-203ENST00000461383 PF4P02776 101 aa4.8□□□□□ -1.64
VCL-203ENST00000461383 LMNB2Q03252 620 aa4.8□□□□□ -1.64
VCL-203ENST00000461383 CAMK2GQ13555 558 aaPredicted RBP4.8□□□□□ -1.64
VCL-203ENST00000461383 IKBKEQ14164 716 aa4.8□□□□□ -1.64
VCL-203ENST00000461383 PCNX4Q63HM2 1172 aa4.8□□□□□ -1.64
VCL-203ENST00000461383 PSAPL1Q6NUJ1 521 aa4.8□□□□□ -1.64
VCL-203ENST00000461383 ILDR2Q71H61 639 aa4.8□□□□□ -1.64
VCL-203ENST00000461383 GOLM1Q8NBJ4 401 aa4.8□□□□□ -1.64
VCL-203ENST00000461383 PHC3Q8NDX5 983 aa4.8□□□□□ -1.64
VCL-203ENST00000461383 PMFBP1Q8TBY8 1022 aa4.8□□□□□ -1.64
VCL-203ENST00000461383 NUDT8Q8WV74 236 aa4.8□□□□□ -1.64
VCL-203ENST00000461383 CPLX3Q8WVH0 158 aa4.8□□□□□ -1.64
VCL-203ENST00000461383 ARMC5Q96C12 935 aa4.8□□□□□ -1.64
VCL-203ENST00000461383 GMLQ99445 158 aa4.8□□□□□ -1.64
VCL-203ENST00000461383 HIRIP3Q9BW71 556 aaPredicted RBP4.8□□□□□ -1.64
VCL-203ENST00000461383 MIR1-1HGQ9H1L0 117 aa4.8□□□□□ -1.64
VCL-203ENST00000461383 SEMA6BQ9H3T3 888 aa4.8□□□□□ -1.64
VCL-203ENST00000461383 ADAMTS1Q9UHI8 967 aa4.8□□□□□ -1.64
VCL-203ENST00000461383 TRIM33Q9UPN9 1127 aa4.8□□□□□ -1.64
VCL-203ENST00000461383 DYRK3O43781 588 aa4.79□□□□□ -1.64
VCL-203ENST00000461383 ATF4P18848 351 aaPredicted RBP4.79□□□□□ -1.64
VCL-203ENST00000461383 CDC27P30260 824 aa4.79□□□□□ -1.64
VCL-203ENST00000461383 CDC25BP30305 580 aa4.79□□□□□ -1.64
VCL-203ENST00000461383 NASPP49321 788 aaPredicted RBP4.79□□□□□ -1.64
VCL-203ENST00000461383 APOBRQ0VD83 1088 aa4.79□□□□□ -1.64
VCL-203ENST00000461383 FAAP100Q0VG06 881 aa4.79□□□□□ -1.64
VCL-203ENST00000461383 LRRC14Q15048 493 aa4.79□□□□□ -1.64
VCL-203ENST00000461383 FAM117BQ6P1L5 589 aa4.79□□□□□ -1.64
VCL-203ENST00000461383 MCF2L2Q86YR7 1114 aa4.79□□□□□ -1.64
VCL-203ENST00000461383 RASGRP4Q8TDF6 673 aa4.79□□□□□ -1.64
VCL-203ENST00000461383 SLC7A3Q8WY07 619 aa4.79□□□□□ -1.64
VCL-203ENST00000461383 JARID2Q92833 1246 aaPredicted RBP4.79□□□□□ -1.64
VCL-203ENST00000461383 RHOVQ96L33 236 aa4.79□□□□□ -1.64
VCL-203ENST00000461383 LPIN3Q9BQK8 851 aa4.79□□□□□ -1.64
VCL-203ENST00000461383 JPH1Q9HDC5 661 aaPredicted RBP4.79□□□□□ -1.64
VCL-203ENST00000461383 SH2B1Q9NRF2 756 aaPredicted RBP4.79□□□□□ -1.64
VCL-203ENST00000461383 TPSG1Q9NRR2 321 aa4.79□□□□□ -1.64
VCL-203ENST00000461383 FRRS1LQ9P0K9 344 aa4.79□□□□□ -1.64
VCL-203ENST00000461383 NAGPAQ9UK23 515 aa4.79□□□□□ -1.64
VCL-203ENST00000461383 EFR3BQ9Y2G0 817 aa4.79□□□□□ -1.64
VCL-203ENST00000461383 PAGE1O75459 146 aa4.78□□□□□ -1.64
VCL-203ENST00000461383 BPNT1O95861 308 aa4.78□□□□□ -1.64
VCL-203ENST00000461383 B3GALT4O96024 378 aa4.78□□□□□ -1.64
VCL-203ENST00000461383 NME2P22392 152 aa4.78□□□□□ -1.64
VCL-203ENST00000461383 ARL4DP49703 201 aa4.78□□□□□ -1.64
VCL-203ENST00000461383 RPS26P62854 115 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms