RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 LOC100289279A0A1B0GTE1 492 aa6.49□□□□□ -1.37
CLK1-206ENST00000461326 DBX1A6NMT0 343 aa6.49□□□□□ -1.37
CLK1-206ENST00000461326 H3BRB1 525 aa6.49□□□□□ -1.37
CLK1-206ENST00000461326 EIF4EBP3O60516 100 aaPredicted RBP6.49□□□□□ -1.37
CLK1-206ENST00000461326 ICMTO60725 284 aa6.49□□□□□ -1.37
CLK1-206ENST00000461326 ABL1P00519 1130 aa6.49□□□□□ -1.37
CLK1-206ENST00000461326 CYP27A1Q02318 531 aa6.49□□□□□ -1.37
CLK1-206ENST00000461326 COL19A1Q14993 1142 aa6.49□□□□□ -1.37
CLK1-206ENST00000461326 EXOSC6Q5RKV6 272 aaKnown RBP6.49□□□□□ -1.37
CLK1-206ENST00000461326 CDPF1Q6NVV7 123 aa6.49□□□□□ -1.37
CLK1-206ENST00000461326 SHISA5Q8N114 240 aa6.49□□□□□ -1.37
CLK1-206ENST00000461326 TMEM102Q8N9M5 508 aaPredicted RBP6.49□□□□□ -1.37
CLK1-206ENST00000461326 HELQQ8TDG4 1101 aa6.49□□□□□ -1.37
CLK1-206ENST00000461326 GTF3C2Q8WUA4 911 aaPredicted RBP6.49□□□□□ -1.37
CLK1-206ENST00000461326 BSNDQ8WZ55 320 aa6.49□□□□□ -1.37
CLK1-206ENST00000461326 NUDT16Q96DE0 195 aaKnown RBP6.49□□□□□ -1.37
CLK1-206ENST00000461326 TUT1Q9H6E5 874 aaKnown RBP6.49□□□□□ -1.37
CLK1-206ENST00000461326 CNTN3Q9P232 1028 aa6.49□□□□□ -1.37
CLK1-206ENST00000461326 SOX1O00570 391 aaPredicted RBP6.48□□□□□ -1.37
CLK1-206ENST00000461326 PAPLNO95428 1278 aa6.48□□□□□ -1.37
CLK1-206ENST00000461326 ACPPP15309 386 aa6.48□□□□□ -1.37
CLK1-206ENST00000461326 ADMP35318 185 aa6.48□□□□□ -1.37
CLK1-206ENST00000461326 FKBP4Q02790 459 aaKnown RBP eCLIP6.48□□□□□ -1.37
CLK1-206ENST00000461326 PKN1Q16512 942 aa6.48□□□□□ -1.37
CLK1-206ENST00000461326 FBLN7Q53RD9 439 aa6.48□□□□□ -1.37
CLK1-206ENST00000461326 ZNF648Q5T619 568 aaPredicted RBP6.48□□□□□ -1.37
CLK1-206ENST00000461326 HGSNATQ68CP4 663 aa6.48□□□□□ -1.37
CLK1-206ENST00000461326 TTC16Q8NEE8 873 aa6.48□□□□□ -1.37
CLK1-206ENST00000461326 EZH1Q92800 747 aaPredicted RBP6.48□□□□□ -1.37
CLK1-206ENST00000461326 PMEPA1Q969W9 287 aa6.48□□□□□ -1.37
CLK1-206ENST00000461326 SOX17Q9H6I2 414 aaPredicted RBP6.48□□□□□ -1.37
CLK1-206ENST00000461326 BIN2Q9UBW5 565 aaPredicted RBP6.48□□□□□ -1.37
CLK1-206ENST00000461326 FAM170BA6NMN3 283 aa6.47□□□□□ -1.37
CLK1-206ENST00000461326 DRD2P14416 443 aa6.47□□□□□ -1.37
CLK1-206ENST00000461326 PCSK2P16519 638 aa6.47□□□□□ -1.37
CLK1-206ENST00000461326 MAP7Q14244 749 aa6.47□□□□□ -1.37
CLK1-206ENST00000461326 C1orf127Q8N9H9 656 aa6.47□□□□□ -1.37
CLK1-206ENST00000461326 C2CD4AQ8NCU7 369 aaPredicted RBP6.47□□□□□ -1.37
CLK1-206ENST00000461326 LRRC4CQ9HCJ2 640 aa6.47□□□□□ -1.37
CLK1-206ENST00000461326 ZC3H7BQ9UGR2 993 aaKnown RBP6.47□□□□□ -1.37
CLK1-206ENST00000461326 SLC5A6Q9Y289 635 aa6.47□□□□□ -1.37
CLK1-206ENST00000461326 ZBTB39O15060 712 aa6.46□□□□□ -1.38
CLK1-206ENST00000461326 TRPA1O75762 1119 aa6.46□□□□□ -1.38
CLK1-206ENST00000461326 FAM13AO94988 1023 aa6.46□□□□□ -1.38
CLK1-206ENST00000461326 NPR3P17342 541 aa6.46□□□□□ -1.38
CLK1-206ENST00000461326 SOX4Q06945 474 aaPredicted RBP6.46□□□□□ -1.38
CLK1-206ENST00000461326 ZNF211Q13398 564 aaPredicted RBP6.46□□□□□ -1.38
CLK1-206ENST00000461326 PLCL1Q15111 1095 aa6.46□□□□□ -1.38
CLK1-206ENST00000461326 XKR5Q6UX68 686 aa6.46□□□□□ -1.38
CLK1-206ENST00000461326 CAPN12Q6ZSI9 719 aa6.46□□□□□ -1.38
CLK1-206ENST00000461326 HHIPQ96QV1 700 aa6.46□□□□□ -1.38
CLK1-206ENST00000461326 FARP2O94887 1054 aaPredicted RBP6.45□□□□□ -1.38
CLK1-206ENST00000461326 LCE4AQ5TA78 99 aa6.45□□□□□ -1.38
CLK1-206ENST00000461326 VN1R5Q7Z5H4 357 aa6.45□□□□□ -1.38
CLK1-206ENST00000461326 STK11IPQ8N1F8 1099 aa6.45□□□□□ -1.38
CLK1-206ENST00000461326 NXPE3Q969Y0 559 aa6.45□□□□□ -1.38
CLK1-206ENST00000461326 OSMRQ99650 979 aa6.45□□□□□ -1.38
CLK1-206ENST00000461326 SEPT3Q9UH03 358 aa6.45□□□□□ -1.38
CLK1-206ENST00000461326 DLGAP3O95886 979 aa6.44□□□□□ -1.38
CLK1-206ENST00000461326 ZNF124Q15973 351 aa6.44□□□□□ -1.38
CLK1-206ENST00000461326 HP1BP3Q5SSJ5 553 aaPredicted RBP6.44□□□□□ -1.38
CLK1-206ENST00000461326 ALKBH2Q6NS38 261 aa6.44□□□□□ -1.38
CLK1-206ENST00000461326 DNAJC14Q6Y2X3 702 aaPredicted RBP6.44□□□□□ -1.38
CLK1-206ENST00000461326 GATA6Q92908 595 aa6.44□□□□□ -1.38
CLK1-206ENST00000461326 DCTN4Q9UJW0 460 aa6.44□□□□□ -1.38
CLK1-206ENST00000461326 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.44□□□□□ -1.38
CLK1-206ENST00000461326 ADH5P11766 374 aa6.43□□□□□ -1.38
CLK1-206ENST00000461326 GSTM4Q03013 218 aa6.43□□□□□ -1.38
CLK1-206ENST00000461326 ZNF792Q3KQV3 632 aa6.43□□□□□ -1.38
CLK1-206ENST00000461326 SPOCD1Q6ZMY3 1216 aa6.43□□□□□ -1.38
CLK1-206ENST00000461326 ZNF765Q7L2R6 523 aa6.43□□□□□ -1.38
CLK1-206ENST00000461326 KSR1Q8IVT5 923 aa6.43□□□□□ -1.38
CLK1-206ENST00000461326 ZSCAN29Q8IWY8 852 aaPredicted RBP6.43□□□□□ -1.38
CLK1-206ENST00000461326 ASAP3Q8TDY4 903 aa6.43□□□□□ -1.38
CLK1-206ENST00000461326 BCL7CQ8WUZ0 217 aaPredicted RBP6.43□□□□□ -1.38
CLK1-206ENST00000461326 EDN3P14138 238 aa6.42□□□□□ -1.38
CLK1-206ENST00000461326 RAB6AP20340 208 aa6.42□□□□□ -1.38
CLK1-206ENST00000461326 ARHGAP4P98171 946 aa6.42□□□□□ -1.38
CLK1-206ENST00000461326 EDEM1Q92611 657 aa6.42□□□□□ -1.38
CLK1-206ENST00000461326 MISP3Q96FF7 219 aa6.42□□□□□ -1.38
CLK1-206ENST00000461326 CITED4Q96RK1 184 aa6.42□□□□□ -1.38
CLK1-206ENST00000461326 SLC38A3Q99624 504 aa6.42□□□□□ -1.38
CLK1-206ENST00000461326 ZKSCAN3Q9BRR0 538 aa6.42□□□□□ -1.38
CLK1-206ENST00000461326 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.41□□□□□ -1.38
CLK1-206ENST00000461326 NDUFB5O43674 189 aa6.41□□□□□ -1.38
CLK1-206ENST00000461326 NFICP08651 508 aa6.41□□□□□ -1.38
CLK1-206ENST00000461326 ESRRAP11474 423 aaPredicted RBP6.41□□□□□ -1.38
CLK1-206ENST00000461326 MAPK1P28482 360 aa6.41□□□□□ -1.38
CLK1-206ENST00000461326 C8orf34Q49A92 452 aa6.41□□□□□ -1.38
CLK1-206ENST00000461326 ATG4DQ86TL0 474 aaPredicted RBP6.41□□□□□ -1.38
CLK1-206ENST00000461326 ATCAYQ86WG3 371 aa6.41□□□□□ -1.38
CLK1-206ENST00000461326 ASB16Q96NS5 453 aa6.41□□□□□ -1.38
CLK1-206ENST00000461326 BCL11AQ9H165 835 aa6.41□□□□□ -1.38
CLK1-206ENST00000461326 CHRDQ9H2X0 955 aa6.41□□□□□ -1.38
CLK1-206ENST00000461326 ANO2Q9NQ90 1003 aa6.41□□□□□ -1.38
CLK1-206ENST00000461326 ACTL7BQ9Y614 415 aa6.41□□□□□ -1.38
CLK1-206ENST00000461326 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.41□□□□□ -1.38
CLK1-206ENST00000461326 CARMIL2Q6F5E8 1435 aa6.41□□□□□ -1.38
CLK1-206ENST00000461326 RBM47A0AV96 593 aaKnown RBP6.4□□□□□ -1.38
CLK1-206ENST00000461326 DNM1Q05193 864 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms