RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 RPS8P62241 208 aaKnown RBP12.93□□□□□ -0.34
IFT88-204ENST00000461115 NFIXQ14938 502 aa12.93□□□□□ -0.34
IFT88-204ENST00000461115 DHX32Q7L7V1 743 aaKnown RBP12.93□□□□□ -0.34
IFT88-204ENST00000461115 CELF1Q92879 486 aaKnown RBP12.93□□□□□ -0.34
IFT88-204ENST00000461115 TPCN1Q9ULQ1 816 aa12.93□□□□□ -0.34
IFT88-204ENST00000461115 COLQQ9Y215 455 aaPredicted RBP12.93□□□□□ -0.34
IFT88-204ENST00000461115 TIAM2Q8IVF5 1701 aa12.92□□□□□ -0.34
IFT88-204ENST00000461115 GPAA1O43292 621 aa12.92□□□□□ -0.34
IFT88-204ENST00000461115 PSEN1P49768 467 aa12.92□□□□□ -0.34
IFT88-204ENST00000461115 CRY2Q49AN0 593 aa12.92□□□□□ -0.34
IFT88-204ENST00000461115 SLC9C2Q5TAH2 1124 aa12.92□□□□□ -0.34
IFT88-204ENST00000461115 FBXO33Q7Z6M2 555 aa12.92□□□□□ -0.34
IFT88-204ENST00000461115 ANKRD2Q9GZV1 360 aa12.92□□□□□ -0.34
IFT88-204ENST00000461115 WDR33Q9C0J8 1336 aaKnown RBP12.91□□□□□ -0.34
IFT88-204ENST00000461115 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.91□□□□□ -0.34
IFT88-204ENST00000461115 KLRG2A4D1S0 409 aaPredicted RBP12.91□□□□□ -0.34
IFT88-204ENST00000461115 E7EWF7 191 aa12.91□□□□□ -0.34
IFT88-204ENST00000461115 GOLGA6L22H0YM25 854 aa12.91□□□□□ -0.34
IFT88-204ENST00000461115 FGAP02671 866 aa12.91□□□□□ -0.34
IFT88-204ENST00000461115 GYS1P13807 737 aa12.91□□□□□ -0.34
IFT88-204ENST00000461115 SMIM5Q71RC9 77 aa12.91□□□□□ -0.34
IFT88-204ENST00000461115 CCDC88AQ3V6T2 1871 aa12.91□□□□□ -0.34
IFT88-204ENST00000461115 LRRC37AA6NMS7 1700 aa12.91□□□□□ -0.34
IFT88-204ENST00000461115 TNS1Q9HBL0 1735 aaKnown RBP12.91□□□□□ -0.34
IFT88-204ENST00000461115 PNPLA7Q6ZV29 1317 aa12.91□□□□□ -0.34
IFT88-204ENST00000461115 ZNF532Q9HCE3 1301 aa12.91□□□□□ -0.34
IFT88-204ENST00000461115 SNAP23O00161 211 aa12.9□□□□□ -0.34
IFT88-204ENST00000461115 GTF2E1P29083 439 aaPredicted RBP12.9□□□□□ -0.34
IFT88-204ENST00000461115 BCAMP50895 628 aa12.9□□□□□ -0.34
IFT88-204ENST00000461115 MAP3K12Q12852 859 aa12.9□□□□□ -0.34
IFT88-204ENST00000461115 MKRN3Q13064 507 aaKnown RBP12.9□□□□□ -0.34
IFT88-204ENST00000461115 WASHC4Q2M389 1173 aa12.9□□□□□ -0.34
IFT88-204ENST00000461115 BICDL1Q6ZP65 573 aa12.9□□□□□ -0.34
IFT88-204ENST00000461115 C15orf52Q6ZUT6 534 aaKnown RBP12.9□□□□□ -0.34
IFT88-204ENST00000461115 FAM84BQ96KN1 310 aaPredicted RBP12.9□□□□□ -0.34
IFT88-204ENST00000461115 STRBPQ96SI9 672 aaKnown RBP12.9□□□□□ -0.34
IFT88-204ENST00000461115 LMBRD1Q9NUN5 540 aa12.9□□□□□ -0.34
IFT88-204ENST00000461115 WWC3Q9ULE0 1092 aa12.9□□□□□ -0.34
IFT88-204ENST00000461115 COL1A1P02452 1464 aaPredicted RBP12.9□□□□□ -0.34
IFT88-204ENST00000461115 MAST2Q6P0Q8 1798 aa12.9□□□□□ -0.34
IFT88-204ENST00000461115 POTEFA5A3E0 1075 aa12.89□□□□□ -0.35
IFT88-204ENST00000461115 TXNRD1Q16881 649 aa12.89□□□□□ -0.35
IFT88-204ENST00000461115 KLHL40Q2TBA0 621 aa12.89□□□□□ -0.35
IFT88-204ENST00000461115 PRR5LQ6MZQ0 368 aa12.89□□□□□ -0.35
IFT88-204ENST00000461115 NOL8Q76FK4 1167 aaKnown RBP12.89□□□□□ -0.35
IFT88-204ENST00000461115 GTF3C6Q969F1 213 aa12.89□□□□□ -0.35
IFT88-204ENST00000461115 LLPHQ9BRT6 129 aaKnown RBP12.89□□□□□ -0.35
IFT88-204ENST00000461115 GNL3LQ9NVN8 582 aaKnown RBP12.89□□□□□ -0.35
IFT88-204ENST00000461115 SMC3Q9UQE7 1217 aa12.89□□□□□ -0.35
IFT88-204ENST00000461115 LTBP1Q14766 1721 aa12.89□□□□□ -0.35
IFT88-204ENST00000461115 ANKRD31Q8N7Z5 1873 aa12.89□□□□□ -0.35
IFT88-204ENST00000461115 PFKFB2O60825 505 aa12.88□□□□□ -0.35
IFT88-204ENST00000461115 ZSCAN22P10073 491 aaPredicted RBP12.88□□□□□ -0.35
IFT88-204ENST00000461115 SYT1P21579 422 aa12.88□□□□□ -0.35
IFT88-204ENST00000461115 HOXA10P31260 410 aaPredicted RBP12.88□□□□□ -0.35
IFT88-204ENST00000461115 PDAP1Q13442 181 aaKnown RBP12.88□□□□□ -0.35
IFT88-204ENST00000461115 IMMTQ16891 758 aaKnown RBP12.88□□□□□ -0.35
IFT88-204ENST00000461115 MB21D2Q8IYB1 491 aaPredicted RBP12.88□□□□□ -0.35
IFT88-204ENST00000461115 TMEM87AQ8NBN3 555 aa12.88□□□□□ -0.35
IFT88-204ENST00000461115 CHMP4CQ96CF2 233 aa12.88□□□□□ -0.35
IFT88-204ENST00000461115 ZNF274Q96GC6 653 aaPredicted RBP12.88□□□□□ -0.35
IFT88-204ENST00000461115 DENND2AQ9ULE3 1009 aa12.88□□□□□ -0.35
IFT88-204ENST00000461115 ISY1Q9ULR0 285 aaKnown RBP12.88□□□□□ -0.35
IFT88-204ENST00000461115 QSER1Q2KHR3 1735 aa12.88□□□□□ -0.35
IFT88-204ENST00000461115 STX6O43752 255 aa12.88□□□□□ -0.35
IFT88-204ENST00000461115 IDH1O75874 414 aaKnown RBP12.88□□□□□ -0.35
IFT88-204ENST00000461115 TRIM37O94972 964 aa12.88□□□□□ -0.35
IFT88-204ENST00000461115 POTEJP0CG39 1038 aa12.88□□□□□ -0.35
IFT88-204ENST00000461115 GNAT2P19087 354 aa12.88□□□□□ -0.35
IFT88-204ENST00000461115 GRAPQ13588 217 aa12.88□□□□□ -0.35
IFT88-204ENST00000461115 TTLL5Q6EMB2 1281 aa12.88□□□□□ -0.35
IFT88-204ENST00000461115 Q6ZUG5 572 aa12.88□□□□□ -0.35
IFT88-204ENST00000461115 CCDC83Q8IWF9 413 aa12.88□□□□□ -0.35
IFT88-204ENST00000461115 CNBD1Q8NA66 436 aa12.88□□□□□ -0.35
IFT88-204ENST00000461115 RGS22Q8NE09 1264 aa12.88□□□□□ -0.35
IFT88-204ENST00000461115 SMARCC2Q8TAQ2 1214 aa12.88□□□□□ -0.35
IFT88-204ENST00000461115 GRAPLQ8TC17 118 aaPredicted RBP12.88□□□□□ -0.35
IFT88-204ENST00000461115 OCEL1Q9H607 264 aa12.88□□□□□ -0.35
IFT88-204ENST00000461115 DUOX1Q9NRD9 1551 aa12.87□□□□□ -0.35
IFT88-204ENST00000461115 A0A0G2JLW4 131 aa12.87□□□□□ -0.35
IFT88-204ENST00000461115 FSD2A1L4K1 749 aa12.87□□□□□ -0.35
IFT88-204ENST00000461115 PATL2C9JE40 543 aaKnown RBP12.87□□□□□ -0.35
IFT88-204ENST00000461115 PDCP20941 246 aa12.87□□□□□ -0.35
IFT88-204ENST00000461115 GJB2P29033 226 aa12.87□□□□□ -0.35
IFT88-204ENST00000461115 CAVIN4Q5BKX8 364 aa12.87□□□□□ -0.35
IFT88-204ENST00000461115 NBPF3Q9H094 633 aa12.87□□□□□ -0.35
IFT88-204ENST00000461115 MTMR6Q9Y217 621 aa12.87□□□□□ -0.35
IFT88-204ENST00000461115 LEMD3Q9Y2U8 911 aa12.87□□□□□ -0.35
IFT88-204ENST00000461115 ZNF213O14771 459 aa12.86□□□□□ -0.35
IFT88-204ENST00000461115 NCOA7Q8NI08 942 aa12.86□□□□□ -0.35
IFT88-204ENST00000461115 TCEANC2Q96MN5 208 aa12.86□□□□□ -0.35
IFT88-204ENST00000461115 MTA3Q9BTC8 594 aa12.86□□□□□ -0.35
IFT88-204ENST00000461115 SALL1Q9NSC2 1324 aa12.85□□□□□ -0.35
IFT88-204ENST00000461115 GSG1L2A8MUP6 293 aa12.85□□□□□ -0.35
IFT88-204ENST00000461115 POLRMTO00411 1230 aaKnown RBP12.85□□□□□ -0.35
IFT88-204ENST00000461115 PHF14O94880 888 aa12.85□□□□□ -0.35
IFT88-204ENST00000461115 F13A1P00488 732 aa12.85□□□□□ -0.35
IFT88-204ENST00000461115 SERPINB2P05120 415 aa12.85□□□□□ -0.35
IFT88-204ENST00000461115 MCM5P33992 734 aa12.85□□□□□ -0.35
IFT88-204ENST00000461115 GYG1P46976 350 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms