RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 SART1O43290 800 aaKnown RBP4.53□□□□□ -1.68
HPS3-203ENST00000460822 TRPA1O75762 1119 aa4.53□□□□□ -1.68
HPS3-203ENST00000460822 ACPPP15309 386 aa4.53□□□□□ -1.68
HPS3-203ENST00000460822 YBX3P16989 372 aaKnown RBP eCLIP4.53□□□□□ -1.68
HPS3-203ENST00000460822 RAD51AP2Q09MP3 1159 aa4.53□□□□□ -1.68
HPS3-203ENST00000460822 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.53□□□□□ -1.68
HPS3-203ENST00000460822 METTL16Q86W50 562 aaKnown RBP4.53□□□□□ -1.68
HPS3-203ENST00000460822 GJD3Q8N144 294 aa4.53□□□□□ -1.68
HPS3-203ENST00000460822 ASAP3Q8TDY4 903 aa4.53□□□□□ -1.68
HPS3-203ENST00000460822 UBXN4Q92575 508 aa4.53□□□□□ -1.68
HPS3-203ENST00000460822 FMNL2Q96PY5 1086 aa4.53□□□□□ -1.68
HPS3-203ENST00000460822 CHRDQ9H2X0 955 aa4.53□□□□□ -1.68
HPS3-203ENST00000460822 ZFYVE28Q9HCC9 887 aa4.53□□□□□ -1.68
HPS3-203ENST00000460822 COL17A1Q9UMD9 1497 aaPredicted RBP4.53□□□□□ -1.68
HPS3-203ENST00000460822 PAX4O43316 350 aa4.53□□□□□ -1.68
HPS3-203ENST00000460822 FANCCQ00597 558 aa4.53□□□□□ -1.68
HPS3-203ENST00000460822 ENOX2Q16206 610 aaKnown RBP4.53□□□□□ -1.68
HPS3-203ENST00000460822 BSNDQ8WZ55 320 aa4.53□□□□□ -1.68
HPS3-203ENST00000460822 KLHDC7BQ96G42 594 aa4.53□□□□□ -1.68
HPS3-203ENST00000460822 EIF4EBP3O60516 100 aaPredicted RBP4.52□□□□□ -1.69
HPS3-203ENST00000460822 ITGAEP38570 1179 aa4.52□□□□□ -1.69
HPS3-203ENST00000460822 C19orf57Q0VDD7 668 aa4.52□□□□□ -1.69
HPS3-203ENST00000460822 IKBKEQ14164 716 aa4.52□□□□□ -1.69
HPS3-203ENST00000460822 PRR23CQ6ZRP0 262 aa4.52□□□□□ -1.69
HPS3-203ENST00000460822 NXPE3Q969Y0 559 aa4.52□□□□□ -1.69
HPS3-203ENST00000460822 ZKSCAN3Q9BRR0 538 aa4.52□□□□□ -1.69
HPS3-203ENST00000460822 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.52□□□□□ -1.69
HPS3-203ENST00000460822 NFKBIEO00221 500 aa4.51□□□□□ -1.69
HPS3-203ENST00000460822 COBLO75128 1261 aa4.51□□□□□ -1.69
HPS3-203ENST00000460822 ALG1LQ6GMV1 187 aa4.51□□□□□ -1.69
HPS3-203ENST00000460822 DZIP1LQ8IYY4 767 aaKnown RBP4.51□□□□□ -1.69
HPS3-203ENST00000460822 RNF34Q969K3 372 aa4.51□□□□□ -1.69
HPS3-203ENST00000460822 METTL5Q9NRN9 209 aaKnown RBP4.51□□□□□ -1.69
HPS3-203ENST00000460822 DDX3YO15523 660 aaKnown RBP4.51□□□□□ -1.69
HPS3-203ENST00000460822 DHX15O43143 795 aaKnown RBP4.51□□□□□ -1.69
HPS3-203ENST00000460822 POLR3DP05423 398 aaPredicted RBP4.51□□□□□ -1.69
HPS3-203ENST00000460822 GNA15P30679 374 aa4.51□□□□□ -1.69
HPS3-203ENST00000460822 ZNF76P36508 570 aa4.51□□□□□ -1.69
HPS3-203ENST00000460822 NLRP12P59046 1061 aa4.51□□□□□ -1.69
HPS3-203ENST00000460822 ORC1Q13415 861 aa4.51□□□□□ -1.69
HPS3-203ENST00000460822 SLC51AQ86UW1 340 aa4.51□□□□□ -1.69
HPS3-203ENST00000460822 UTP4Q969X6 686 aaKnown RBP4.51□□□□□ -1.69
HPS3-203ENST00000460822 HHIPQ96QV1 700 aa4.51□□□□□ -1.69
HPS3-203ENST00000460822 RUSC1Q9BVN2 902 aa4.51□□□□□ -1.69
HPS3-203ENST00000460822 KCNK4Q9NYG8 393 aa4.51□□□□□ -1.69
HPS3-203ENST00000460822 SOX13Q9UN79 622 aa4.51□□□□□ -1.69
HPS3-203ENST00000460822 RAXQ9Y2V3 346 aa4.51□□□□□ -1.69
HPS3-203ENST00000460822 GSC2O15499 205 aa4.5□□□□□ -1.69
HPS3-203ENST00000460822 SMARCA5O60264 1052 aaPredicted RBP4.5□□□□□ -1.69
HPS3-203ENST00000460822 WISP1O95388 367 aa4.5□□□□□ -1.69
HPS3-203ENST00000460822 HMGB1P09429 215 aaKnown RBP4.5□□□□□ -1.69
HPS3-203ENST00000460822 HSP90B1P14625 803 aaKnown RBP4.5□□□□□ -1.69
HPS3-203ENST00000460822 UVSSAQ2YD98 709 aa4.5□□□□□ -1.69
HPS3-203ENST00000460822 FDX2Q6P4F2 183 aa4.5□□□□□ -1.69
HPS3-203ENST00000460822 ADAMTSL4Q6UY14 1074 aa4.5□□□□□ -1.69
HPS3-203ENST00000460822 UBASH3BQ8TF42 649 aa4.5□□□□□ -1.69
HPS3-203ENST00000460822 PUS7Q96PZ0 661 aaKnown RBP4.5□□□□□ -1.69
HPS3-203ENST00000460822 TINF2Q9BSI4 451 aa4.5□□□□□ -1.69
HPS3-203ENST00000460822 TANGO6Q9C0B7 1094 aa4.5□□□□□ -1.69
HPS3-203ENST00000460822 RNF208Q9H0X6 261 aa4.5□□□□□ -1.69
HPS3-203ENST00000460822 CCSER2Q9H7U1 834 aa4.5□□□□□ -1.69
HPS3-203ENST00000460822 STOML1Q9UBI4 398 aa4.5□□□□□ -1.69
HPS3-203ENST00000460822 RNF112Q9ULX5 631 aa4.5□□□□□ -1.69
HPS3-203ENST00000460822 EIF1AYO14602 144 aaKnown RBP4.49□□□□□ -1.69
HPS3-203ENST00000460822 GAS2O43903 313 aaKnown RBP4.49□□□□□ -1.69
HPS3-203ENST00000460822 FSTP19883 344 aa4.49□□□□□ -1.69
HPS3-203ENST00000460822 ANKRD34AQ69YU3 496 aa4.49□□□□□ -1.69
HPS3-203ENST00000460822 Q6ZS46 218 aa4.49□□□□□ -1.69
HPS3-203ENST00000460822 KIAA1211Q6ZU35 1233 aa4.49□□□□□ -1.69
HPS3-203ENST00000460822 GALNT12Q8IXK2 581 aa4.49□□□□□ -1.69
HPS3-203ENST00000460822 DDX54Q8TDD1 881 aaKnown RBP4.49□□□□□ -1.69
HPS3-203ENST00000460822 USP26Q9BXU7 913 aa4.49□□□□□ -1.69
HPS3-203ENST00000460822 TGIF2Q9GZN2 237 aa4.49□□□□□ -1.69
HPS3-203ENST00000460822 LIN7BQ9HAP6 207 aa4.49□□□□□ -1.69
HPS3-203ENST00000460822 SOX1O00570 391 aaPredicted RBP4.49□□□□□ -1.69
HPS3-203ENST00000460822 CPNE3O75131 537 aaKnown RBP4.49□□□□□ -1.69
HPS3-203ENST00000460822 FBF1Q8TES7 1133 aa4.49□□□□□ -1.69
HPS3-203ENST00000460822 CRELD1Q96HD1 420 aa4.49□□□□□ -1.69
HPS3-203ENST00000460822 CSRNP1Q96S65 589 aa4.49□□□□□ -1.69
HPS3-203ENST00000460822 UBL7Q96S82 380 aaPredicted RBP4.49□□□□□ -1.69
HPS3-203ENST00000460822 BHLHE41Q9C0J9 482 aaPredicted RBP4.49□□□□□ -1.69
HPS3-203ENST00000460822 EHD4Q9H223 541 aa4.49□□□□□ -1.69
HPS3-203ENST00000460822 CAPN10Q9HC96 672 aa4.49□□□□□ -1.69
HPS3-203ENST00000460822 LATS2Q9NRM7 1088 aa4.49□□□□□ -1.69
HPS3-203ENST00000460822 ADAM11O75078 769 aa4.48□□□□□ -1.69
HPS3-203ENST00000460822 TNNI2P48788 182 aa4.48□□□□□ -1.69
HPS3-203ENST00000460822 GSTM4Q03013 218 aa4.48□□□□□ -1.69
HPS3-203ENST00000460822 NUTM2GQ5VZR2 741 aa4.48□□□□□ -1.69
HPS3-203ENST00000460822 KCNF1Q9H3M0 494 aa4.48□□□□□ -1.69
HPS3-203ENST00000460822 ACBD3Q9H3P7 528 aa4.48□□□□□ -1.69
HPS3-203ENST00000460822 SOX17Q9H6I2 414 aaPredicted RBP4.48□□□□□ -1.69
HPS3-203ENST00000460822 CYP4F12Q9HCS2 524 aa4.48□□□□□ -1.69
HPS3-203ENST00000460822 A0A096LPE4 126 aa4.47□□□□□ -1.69
HPS3-203ENST00000460822 A0A1W2PP55 124 aa4.47□□□□□ -1.69
HPS3-203ENST00000460822 A0A1W2PPZ6 126 aa4.47□□□□□ -1.69
HPS3-203ENST00000460822 CTSHP09668 335 aa4.47□□□□□ -1.69
HPS3-203ENST00000460822 HP1BP3Q5SSJ5 553 aaPredicted RBP4.47□□□□□ -1.69
HPS3-203ENST00000460822 PEAR1Q5VY43 1037 aaPredicted RBP4.47□□□□□ -1.69
HPS3-203ENST00000460822 VN1R5Q7Z5H4 357 aa4.47□□□□□ -1.69
HPS3-203ENST00000460822 DNAJC2Q99543 621 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms