RNA–Protein interactions for RNA: ENST00000460781.1

CCDC93-204, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-204ENST00000460781 CD68P34810 354 aaPredicted RBP5.3□□□□□ -1.56
CCDC93-204ENST00000460781 NLRP12P59046 1061 aa5.3□□□□□ -1.56
CCDC93-204ENST00000460781 GNL2Q13823 731 aaKnown RBP5.3□□□□□ -1.56
CCDC93-204ENST00000460781 POU4F3Q15319 338 aa5.3□□□□□ -1.56
CCDC93-204ENST00000460781 DUOXA2Q1HG44 320 aa5.3□□□□□ -1.56
CCDC93-204ENST00000460781 MEI1Q5TIA1 1274 aa5.3□□□□□ -1.56
CCDC93-204ENST00000460781 ALYREFQ86V81 257 aaKnown RBP5.3□□□□□ -1.56
CCDC93-204ENST00000460781 SULF2Q8IWU5 870 aa5.3□□□□□ -1.56
CCDC93-204ENST00000460781 GLIS3Q8NEA6 775 aa5.3□□□□□ -1.56
CCDC93-204ENST00000460781 KCNB2Q92953 911 aa5.3□□□□□ -1.56
CCDC93-204ENST00000460781 NOC4LQ9BVI4 516 aaKnown RBP5.3□□□□□ -1.56
CCDC93-204ENST00000460781 RNF19AQ9NV58 838 aa5.3□□□□□ -1.56
CCDC93-204ENST00000460781 ADAMTS8Q9UP79 889 aa5.3□□□□□ -1.56
CCDC93-204ENST00000460781 A0A0A0MRY4 1105 aa5.29□□□□□ -1.56
CCDC93-204ENST00000460781 UNCXA6NJT0 531 aa5.29□□□□□ -1.56
CCDC93-204ENST00000460781 SART1O43290 800 aaKnown RBP5.29□□□□□ -1.56
CCDC93-204ENST00000460781 ARHGEF15O94989 841 aa5.29□□□□□ -1.56
CCDC93-204ENST00000460781 BPNT1O95861 308 aa5.29□□□□□ -1.56
CCDC93-204ENST00000460781 SPATA31C1P0DKV0 1188 aa5.29□□□□□ -1.56
CCDC93-204ENST00000460781 ELNP15502 786 aa5.29□□□□□ -1.56
CCDC93-204ENST00000460781 NME2P22392 152 aa5.29□□□□□ -1.56
CCDC93-204ENST00000460781 GBP2P32456 591 aaPredicted RBP5.29□□□□□ -1.56
CCDC93-204ENST00000460781 SNRPNP63162 240 aaKnown RBP5.29□□□□□ -1.56
CCDC93-204ENST00000460781 VN1R5Q7Z5H4 357 aa5.29□□□□□ -1.56
CCDC93-204ENST00000460781 RECKO95980 971 aa5.28□□□□□ -1.56
CCDC93-204ENST00000460781 ERCC5P28715 1186 aaPredicted RBP5.28□□□□□ -1.56
CCDC93-204ENST00000460781 NRG1Q02297 640 aaPredicted RBP5.28□□□□□ -1.56
CCDC93-204ENST00000460781 SNAP47Q5SQN1 464 aa5.28□□□□□ -1.56
CCDC93-204ENST00000460781 TTBK2Q6IQ55 1244 aa5.28□□□□□ -1.56
CCDC93-204ENST00000460781 LLGL2Q6P1M3 1020 aa5.28□□□□□ -1.56
CCDC93-204ENST00000460781 FDX2Q6P4F2 183 aa5.28□□□□□ -1.56
CCDC93-204ENST00000460781 ACAD11Q709F0 780 aa5.28□□□□□ -1.56
CCDC93-204ENST00000460781 FBXO11Q86XK2 927 aa5.28□□□□□ -1.56
CCDC93-204ENST00000460781 FMR1NBQ8N0W7 255 aaPredicted RBP5.28□□□□□ -1.56
CCDC93-204ENST00000460781 C3orf58Q8NDZ4 430 aa5.28□□□□□ -1.56
CCDC93-204ENST00000460781 RUSC1Q9BVN2 902 aa5.28□□□□□ -1.56
CCDC93-204ENST00000460781 MRPL18Q9H0U6 180 aaKnown RBP5.28□□□□□ -1.56
CCDC93-204ENST00000460781 MIR1-1HGQ9H1L0 117 aa5.28□□□□□ -1.56
CCDC93-204ENST00000460781 STK17AQ9UEE5 414 aa5.28□□□□□ -1.56
CCDC93-204ENST00000460781 THOC2Q8NI27 1593 aaKnown RBP5.28□□□□□ -1.56
CCDC93-204ENST00000460781 USP31Q70CQ4 1352 aa5.28□□□□□ -1.56
CCDC93-204ENST00000460781 CNTNAP5Q8WYK1 1306 aa5.27□□□□□ -1.57
CCDC93-204ENST00000460781 C9orf172C9J069 976 aa5.27□□□□□ -1.57
CCDC93-204ENST00000460781 FAM229AH3BQW9 127 aa5.27□□□□□ -1.57
CCDC93-204ENST00000460781 SOX1O00570 391 aaPredicted RBP5.27□□□□□ -1.57
CCDC93-204ENST00000460781 GAS2O43903 313 aaKnown RBP5.27□□□□□ -1.57
CCDC93-204ENST00000460781 SLFN14P0C7P3 912 aa5.27□□□□□ -1.57
CCDC93-204ENST00000460781 LIG3P49916 1009 aa5.27□□□□□ -1.57
CCDC93-204ENST00000460781 GRIK5Q16478 980 aa5.27□□□□□ -1.57
CCDC93-204ENST00000460781 LCE2CQ5TA81 110 aa5.27□□□□□ -1.57
CCDC93-204ENST00000460781 PCNX4Q63HM2 1172 aa5.27□□□□□ -1.57
CCDC93-204ENST00000460781 USP48Q86UV5 1035 aa5.27□□□□□ -1.57
CCDC93-204ENST00000460781 NECAB3Q96P71 396 aaPredicted RBP5.27□□□□□ -1.57
CCDC93-204ENST00000460781 CYP4F12Q9HCS2 524 aa5.27□□□□□ -1.57
CCDC93-204ENST00000460781 KIAA1522Q9P206 1035 aaPredicted RBP5.27□□□□□ -1.57
CCDC93-204ENST00000460781 CYP8B1Q9UNU6 501 aa5.27□□□□□ -1.57
CCDC93-204ENST00000460781 CELA3AP09093 270 aa5.26□□□□□ -1.57
CCDC93-204ENST00000460781 GSTP1P09211 210 aaKnown RBP5.26□□□□□ -1.57
CCDC93-204ENST00000460781 MAOBP27338 520 aa5.26□□□□□ -1.57
CCDC93-204ENST00000460781 ARNTP27540 789 aa5.26□□□□□ -1.57
CCDC93-204ENST00000460781 BAG6P46379 1132 aa5.26□□□□□ -1.57
CCDC93-204ENST00000460781 SETDB1Q15047 1291 aa5.26□□□□□ -1.57
CCDC93-204ENST00000460781 ZNF423Q2M1K9 1284 aa5.26□□□□□ -1.57
CCDC93-204ENST00000460781 NUTM2GQ5VZR2 741 aa5.26□□□□□ -1.57
CCDC93-204ENST00000460781 MAP1SQ66K74 1059 aaPredicted RBP5.26□□□□□ -1.57
CCDC93-204ENST00000460781 IGF2-ASQ6U949 168 aa5.26□□□□□ -1.57
CCDC93-204ENST00000460781 ZNF654Q8IZM8 581 aa5.26□□□□□ -1.57
CCDC93-204ENST00000460781 ANKRD24Q8TF21 1146 aa5.26□□□□□ -1.57
CCDC93-204ENST00000460781 TRIM11Q96F44 468 aa5.26□□□□□ -1.57
CCDC93-204ENST00000460781 KLHDC7BQ96G42 594 aa5.26□□□□□ -1.57
CCDC93-204ENST00000460781 CEP41Q9BYV8 373 aa5.26□□□□□ -1.57
CCDC93-204ENST00000460781 ZC3H12CQ9C0D7 883 aaKnown RBP5.26□□□□□ -1.57
CCDC93-204ENST00000460781 RNF208Q9H0X6 261 aa5.26□□□□□ -1.57
CCDC93-204ENST00000460781 MINDY4BA8MYZ0 360 aa5.25□□□□□ -1.57
CCDC93-204ENST00000460781 CTSHP09668 335 aa5.25□□□□□ -1.57
CCDC93-204ENST00000460781 GLB1P16278 677 aa5.25□□□□□ -1.57
CCDC93-204ENST00000460781 RPS26P62854 115 aaKnown RBP5.25□□□□□ -1.57
CCDC93-204ENST00000460781 FAAP100Q0VG06 881 aa5.25□□□□□ -1.57
CCDC93-204ENST00000460781 LCE2AQ5TA79 106 aaPredicted RBP5.25□□□□□ -1.57
CCDC93-204ENST00000460781 LINC00114Q6XXX2 140 aa5.25□□□□□ -1.57
CCDC93-204ENST00000460781 VPS37DQ86XT2 251 aa5.25□□□□□ -1.57
CCDC93-204ENST00000460781 ELMO3Q96BJ8 720 aa5.25□□□□□ -1.57
CCDC93-204ENST00000460781 YIPF2Q9BWQ6 316 aa5.25□□□□□ -1.57
CCDC93-204ENST00000460781 AP4E1Q9UPM8 1137 aa5.25□□□□□ -1.57
CCDC93-204ENST00000460781 ERCC6Q03468 1493 aa5.25□□□□□ -1.57
CCDC93-204ENST00000460781 ENC1O14682 589 aa5.24□□□□□ -1.57
CCDC93-204ENST00000460781 FANCCQ00597 558 aa5.24□□□□□ -1.57
CCDC93-204ENST00000460781 NT5DC4Q86YG4 428 aa5.24□□□□□ -1.57
CCDC93-204ENST00000460781 JARID2Q92833 1246 aaPredicted RBP5.24□□□□□ -1.57
CCDC93-204ENST00000460781 TMEM74Q96NL1 305 aa5.24□□□□□ -1.57
CCDC93-204ENST00000460781 PIDD1Q9HB75 910 aa5.24□□□□□ -1.57
CCDC93-204ENST00000460781 KRT82Q9NSB4 513 aa5.24□□□□□ -1.57
CCDC93-204ENST00000460781 INPP5FQ9Y2H2 1132 aa5.24□□□□□ -1.57
CCDC93-204ENST00000460781 SUPT16HQ9Y5B9 1047 aaKnown RBP5.24□□□□□ -1.57
CCDC93-204ENST00000460781 USP11P51784 963 aa5.23□□□□□ -1.57
CCDC93-204ENST00000460781 CHMP4BP1P59074 171 aa5.23□□□□□ -1.57
CCDC93-204ENST00000460781 MLECQ14165 292 aa5.23□□□□□ -1.57
CCDC93-204ENST00000460781 GRIK4Q16099 956 aa5.23□□□□□ -1.57
CCDC93-204ENST00000460781 AKAP4Q5JQC9 854 aa5.23□□□□□ -1.57
CCDC93-204ENST00000460781 C9orf131Q5VYM1 1079 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms