RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 ABCA3Q99758 1704 aa7.62□□□□□ -1.19
PTPN12-209ENST00000460731 FBLN1P23142 703 aa7.62□□□□□ -1.19
PTPN12-209ENST00000460731 PPP2R1AP30153 589 aa7.62□□□□□ -1.19
PTPN12-209ENST00000460731 TRIM28Q13263 835 aaKnown RBP7.62□□□□□ -1.19
PTPN12-209ENST00000460731 LRP8Q14114 963 aa7.62□□□□□ -1.19
PTPN12-209ENST00000460731 ADGRE1Q14246 886 aa7.62□□□□□ -1.19
PTPN12-209ENST00000460731 GRIK4Q16099 956 aa7.62□□□□□ -1.19
PTPN12-209ENST00000460731 CC2D1BQ5T0F9 858 aaKnown RBP7.62□□□□□ -1.19
PTPN12-209ENST00000460731 C8orf86Q6ZUL3 223 aa7.62□□□□□ -1.19
PTPN12-209ENST00000460731 PLPP7Q8NBV4 271 aa7.62□□□□□ -1.19
PTPN12-209ENST00000460731 SLC30A3Q99726 388 aa7.62□□□□□ -1.19
PTPN12-209ENST00000460731 LRP6O75581 1613 aa7.62□□□□□ -1.19
PTPN12-209ENST00000460731 SLIT2O94813 1529 aa7.62□□□□□ -1.19
PTPN12-209ENST00000460731 MAP2P11137 1827 aaKnown RBP7.62□□□□□ -1.19
PTPN12-209ENST00000460731 RTL1A6NKG5 1358 aa7.61□□□□□ -1.19
PTPN12-209ENST00000460731 KIAA0232Q92628 1395 aa7.61□□□□□ -1.19
PTPN12-209ENST00000460731 EML1O00423 815 aa7.61□□□□□ -1.19
PTPN12-209ENST00000460731 MTHFSP49914 203 aa7.61□□□□□ -1.19
PTPN12-209ENST00000460731 SCHIP1Q9P0W5 487 aaPredicted RBP7.61□□□□□ -1.19
PTPN12-209ENST00000460731 GPC6Q9Y625 555 aaPredicted RBP7.61□□□□□ -1.19
PTPN12-209ENST00000460731 PARP3Q9Y6F1 533 aa7.61□□□□□ -1.19
PTPN12-209ENST00000460731 BCL9LQ86UU0 1499 aa7.61□□□□□ -1.19
PTPN12-209ENST00000460731 BLMP54132 1417 aaPredicted RBP7.61□□□□□ -1.19
PTPN12-209ENST00000460731 LMO7Q8WWI1 1683 aa7.6□□□□□ -1.19
PTPN12-209ENST00000460731 CAMTA1Q9Y6Y1 1673 aa7.6□□□□□ -1.19
PTPN12-209ENST00000460731 SELPP16109 830 aa7.6□□□□□ -1.19
PTPN12-209ENST00000460731 HOXC9P31274 260 aa7.6□□□□□ -1.19
PTPN12-209ENST00000460731 ZC3H6P61129 1189 aaKnown RBP7.6□□□□□ -1.19
PTPN12-209ENST00000460731 MBTPS1Q14703 1052 aa7.6□□□□□ -1.19
PTPN12-209ENST00000460731 BICDL1Q6ZP65 573 aa7.6□□□□□ -1.19
PTPN12-209ENST00000460731 NBPF11Q86T75 865 aa7.6□□□□□ -1.19
PTPN12-209ENST00000460731 FLT4P35916 1363 aa7.59□□□□□ -1.19
PTPN12-209ENST00000460731 MYBBP1AQ9BQG0 1328 aaKnown RBP7.59□□□□□ -1.19
PTPN12-209ENST00000460731 C9orf172C9J069 976 aa7.59□□□□□ -1.19
PTPN12-209ENST00000460731 HYAL3O43820 417 aaPredicted RBP7.59□□□□□ -1.19
PTPN12-209ENST00000460731 IL13P35225 146 aa7.59□□□□□ -1.19
PTPN12-209ENST00000460731 EPHA4P54764 986 aa7.59□□□□□ -1.19
PTPN12-209ENST00000460731 SFSWAPQ12872 951 aaKnown RBP7.59□□□□□ -1.19
PTPN12-209ENST00000460731 RRS1Q15050 365 aaKnown RBP7.59□□□□□ -1.19
PTPN12-209ENST00000460731 TEAD4Q15561 434 aa7.59□□□□□ -1.19
PTPN12-209ENST00000460731 HSP90AB2PQ58FF8 381 aa7.59□□□□□ -1.19
PTPN12-209ENST00000460731 DIEXFQ68CQ4 756 aaKnown RBP7.59□□□□□ -1.19
PTPN12-209ENST00000460731 LRRC69Q6ZNQ3 347 aa7.59□□□□□ -1.19
PTPN12-209ENST00000460731 ILDR2Q71H61 639 aa7.59□□□□□ -1.19
PTPN12-209ENST00000460731 PRDM11Q9NQV5 511 aa7.59□□□□□ -1.19
PTPN12-209ENST00000460731 CDK12Q9NYV4 1490 aaPredicted RBP7.59□□□□□ -1.19
PTPN12-209ENST00000460731 NCAPD2Q15021 1401 aa7.59□□□□□ -1.19
PTPN12-209ENST00000460731 COL14A1Q05707 1796 aaKnown RBP7.59□□□□□ -1.2
PTPN12-209ENST00000460731 PEAK1Q9H792 1746 aa7.58□□□□□ -1.2
PTPN12-209ENST00000460731 COL3A1P02461 1466 aaPredicted RBP7.58□□□□□ -1.2
PTPN12-209ENST00000460731 ADH7P40394 386 aa7.58□□□□□ -1.2
PTPN12-209ENST00000460731 UNC5CLQ8IV45 518 aa7.58□□□□□ -1.2
PTPN12-209ENST00000460731 RGS17Q9UGC6 210 aaPredicted RBP7.58□□□□□ -1.2
PTPN12-209ENST00000460731 NWD2Q9ULI1 1742 aa7.58□□□□□ -1.2
PTPN12-209ENST00000460731 COL5A2P05997 1499 aaPredicted RBP7.57□□□□□ -1.2
PTPN12-209ENST00000460731 CCER2I3L3R5 266 aa7.57□□□□□ -1.2
PTPN12-209ENST00000460731 ANP32CO43423 234 aa7.57□□□□□ -1.2
PTPN12-209ENST00000460731 TNNT2P45379 298 aaPredicted RBP7.57□□□□□ -1.2
PTPN12-209ENST00000460731 AMPHP49418 695 aa7.57□□□□□ -1.2
PTPN12-209ENST00000460731 VAC14Q08AM6 782 aa7.57□□□□□ -1.2
PTPN12-209ENST00000460731 NEUROD2Q15784 382 aa7.57□□□□□ -1.2
PTPN12-209ENST00000460731 CHRNA2Q15822 529 aa7.57□□□□□ -1.2
PTPN12-209ENST00000460731 VPS72Q15906 364 aa7.57□□□□□ -1.2
PTPN12-209ENST00000460731 SSBP4Q9BWG4 385 aaPredicted RBP7.57□□□□□ -1.2
PTPN12-209ENST00000460731 PLEKHG2Q9H7P9 1386 aa7.57□□□□□ -1.2
PTPN12-209ENST00000460731 LTN1O94822 1766 aa7.56□□□□□ -1.2
PTPN12-209ENST00000460731 WDR17Q8IZU2 1322 aa7.56□□□□□ -1.2
PTPN12-209ENST00000460731 KRTAP4-8A0A0G2JLE6 195 aa7.56□□□□□ -1.2
PTPN12-209ENST00000460731 ELNP15502 786 aa7.56□□□□□ -1.2
PTPN12-209ENST00000460731 NOS2P35228 1153 aa7.56□□□□□ -1.2
PTPN12-209ENST00000460731 KCNQ4P56696 695 aa7.56□□□□□ -1.2
PTPN12-209ENST00000460731 SPEM2Q0P670 501 aa7.56□□□□□ -1.2
PTPN12-209ENST00000460731 EIF4A2Q14240 407 aaKnown RBP7.56□□□□□ -1.2
PTPN12-209ENST00000460731 TXNRD3Q86VQ6 643 aa7.56□□□□□ -1.2
PTPN12-209ENST00000460731 LENG1Q96BZ8 264 aaPredicted RBP7.56□□□□□ -1.2
PTPN12-209ENST00000460731 NGLY1Q96IV0 654 aa7.56□□□□□ -1.2
PTPN12-209ENST00000460731 CARD10Q9BWT7 1032 aa7.56□□□□□ -1.2
PTPN12-209ENST00000460731 BTG4Q9NY30 223 aa7.56□□□□□ -1.2
PTPN12-209ENST00000460731 KDRP35968 1356 aa7.56□□□□□ -1.2
PTPN12-209ENST00000460731 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.55□□□□□ -1.2
PTPN12-209ENST00000460731 SPATA31A5Q5VU36 1347 aa7.55□□□□□ -1.2
PTPN12-209ENST00000460731 SPATA31A7Q8IWB4 1347 aa7.55□□□□□ -1.2
PTPN12-209ENST00000460731 IGSF1Q8N6C5 1336 aa7.55□□□□□ -1.2
PTPN12-209ENST00000460731 ATRNO75882 1429 aa7.55□□□□□ -1.2
PTPN12-209ENST00000460731 BACH1O14867 736 aa7.55□□□□□ -1.2
PTPN12-209ENST00000460731 CCDC184Q52MB2 194 aa7.55□□□□□ -1.2
PTPN12-209ENST00000460731 NBPF6Q5VWK0 638 aa7.55□□□□□ -1.2
PTPN12-209ENST00000460731 PNISRQ8TF01 805 aaKnown RBP7.55□□□□□ -1.2
PTPN12-209ENST00000460731 ANKRD24Q8TF21 1146 aa7.55□□□□□ -1.2
PTPN12-209ENST00000460731 NBPF4Q96M43 638 aa7.55□□□□□ -1.2
PTPN12-209ENST00000460731 THRAP3Q9Y2W1 955 aaKnown RBP7.55□□□□□ -1.2
PTPN12-209ENST00000460731 NRAPQ86VF7 1730 aa7.55□□□□□ -1.2
PTPN12-209ENST00000460731 AFF2P51816 1311 aa7.54□□□□□ -1.2
PTPN12-209ENST00000460731 SPATA31A1Q5TZJ5 1347 aa7.54□□□□□ -1.2
PTPN12-209ENST00000460731 CRB1P82279 1406 aa7.54□□□□□ -1.2
PTPN12-209ENST00000460731 RGPD5Q99666 1765 aa7.54□□□□□ -1.2
PTPN12-209ENST00000460731 A0A0A0MRY4 1105 aa7.54□□□□□ -1.2
PTPN12-209ENST00000460731 BTBD11A6QL63 1104 aa7.54□□□□□ -1.2
PTPN12-209ENST00000460731 DIAPH1O60610 1272 aaKnown RBP7.54□□□□□ -1.2
PTPN12-209ENST00000460731 ZNF772Q68DY9 489 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms