RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 RASSF10A6NK89 507 aa27.45■■□□□ 1.98
C9orf3-209ENST00000460573 CELF2O95319 508 aaKnown RBP27.45■■□□□ 1.98
C9orf3-209ENST00000460573 MCAMP43121 646 aa27.45■■□□□ 1.98
C9orf3-209ENST00000460573 FMR1Q06787 632 aaKnown RBP eCLIP27.45■■□□□ 1.98
C9orf3-209ENST00000460573 TBC1D10BQ4KMP7 808 aaPredicted RBP27.45■■□□□ 1.98
C9orf3-209ENST00000460573 CDC37L1Q7L3B6 337 aa27.45■■□□□ 1.98
C9orf3-209ENST00000460573 KIAA0825Q8IV33 1275 aa27.45■■□□□ 1.98
C9orf3-209ENST00000460573 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.45■■□□□ 1.98
C9orf3-209ENST00000460573 GLIS2Q9BZE0 524 aaPredicted RBP27.45■■□□□ 1.98
C9orf3-209ENST00000460573 BCL11AQ9H165 835 aa27.45■■□□□ 1.98
C9orf3-209ENST00000460573 COL1A1P02452 1464 aaPredicted RBP27.44■■□□□ 1.98
C9orf3-209ENST00000460573 SHTN1A0MZ66 631 aa27.44■■□□□ 1.98
C9orf3-209ENST00000460573 ECE1P42892 770 aa27.44■■□□□ 1.98
C9orf3-209ENST00000460573 SAMD7Q7Z3H4 446 aa27.44■■□□□ 1.98
C9orf3-209ENST00000460573 GPATCH3Q96I76 525 aa27.44■■□□□ 1.98
C9orf3-209ENST00000460573 COL13A1Q5TAT6 717 aaPredicted RBP27.43■■□□□ 1.98
C9orf3-209ENST00000460573 MAST3O60307 1309 aa27.42■■□□□ 1.98
C9orf3-209ENST00000460573 SPTY2D1Q68D10 685 aaPredicted RBP27.42■■□□□ 1.98
C9orf3-209ENST00000460573 DCPSQ96C86 337 aaKnown RBP27.42■■□□□ 1.98
C9orf3-209ENST00000460573 WDR33Q9C0J8 1336 aaKnown RBP27.41■■□□□ 1.98
C9orf3-209ENST00000460573 IGSF3O75054 1194 aa27.41■■□□□ 1.98
C9orf3-209ENST00000460573 HIRAP54198 1017 aaPredicted RBP27.41■■□□□ 1.98
C9orf3-209ENST00000460573 SCARF1Q14162 830 aa27.41■■□□□ 1.98
C9orf3-209ENST00000460573 TNS4Q8IZW8 715 aa27.41■■□□□ 1.98
C9orf3-209ENST00000460573 MRIQ9BWK5 157 aa27.41■■□□□ 1.98
C9orf3-209ENST00000460573 MYOZ2Q9NPC6 264 aa27.41■■□□□ 1.98
C9orf3-209ENST00000460573 TTF2Q9UNY4 1162 aaKnown RBP27.41■■□□□ 1.98
C9orf3-209ENST00000460573 ATP5JP18859 108 aa27.4■■□□□ 1.98
C9orf3-209ENST00000460573 HDLBPQ00341 1268 aaKnown RBP27.4■■□□□ 1.98
C9orf3-209ENST00000460573 NUCB1Q02818 461 aa27.4■■□□□ 1.98
C9orf3-209ENST00000460573 KIF4BQ2VIQ3 1234 aa27.4■■□□□ 1.98
C9orf3-209ENST00000460573 B4GALNT3Q6L9W6 998 aa27.4■■□□□ 1.98
C9orf3-209ENST00000460573 CHD1LQ86WJ1 897 aa27.4■■□□□ 1.98
C9orf3-209ENST00000460573 ECHDC1Q9NTX5 307 aa27.4■■□□□ 1.98
C9orf3-209ENST00000460573 F8W031 263 aaPredicted RBP27.39■■□□□ 1.98
C9orf3-209ENST00000460573 LDHBP07195 334 aaKnown RBP27.39■■□□□ 1.98
C9orf3-209ENST00000460573 BEGAINQ9BUH8 593 aa27.39■■□□□ 1.98
C9orf3-209ENST00000460573 SERPINA10Q9UK55 444 aa27.39■■□□□ 1.98
C9orf3-209ENST00000460573 TTC41PQ6P2S7 1318 aa27.39■■□□□ 1.97
C9orf3-209ENST00000460573 MAP2K1Q02750 393 aaPredicted RBP27.38■■□□□ 1.97
C9orf3-209ENST00000460573 PI16Q6UXB8 463 aa27.38■■□□□ 1.97
C9orf3-209ENST00000460573 USP48Q86UV5 1035 aa27.38■■□□□ 1.97
C9orf3-209ENST00000460573 MTMR14Q8NCE2 650 aa27.38■■□□□ 1.97
C9orf3-209ENST00000460573 CAPNS2Q96L46 248 aa27.38■■□□□ 1.97
C9orf3-209ENST00000460573 ABCF2Q9UG63 623 aa27.38■■□□□ 1.97
C9orf3-209ENST00000460573 PGAP2Q9UHJ9 254 aa27.38■■□□□ 1.97
C9orf3-209ENST00000460573 TLL2Q9Y6L7 1015 aa27.38■■□□□ 1.97
C9orf3-209ENST00000460573 CST9Q5W186 159 aa27.37■■□□□ 1.97
C9orf3-209ENST00000460573 ERICH6Q7L0X2 663 aa27.37■■□□□ 1.97
C9orf3-209ENST00000460573 KRT26Q7Z3Y9 468 aa27.37■■□□□ 1.97
C9orf3-209ENST00000460573 SNRKQ9NRH2 765 aa27.37■■□□□ 1.97
C9orf3-209ENST00000460573 AKAP11Q9UKA4 1901 aa27.36■■□□□ 1.97
C9orf3-209ENST00000460573 PRDX5P30044 214 aa27.36■■□□□ 1.97
C9orf3-209ENST00000460573 ZAP70P43403 619 aa27.36■■□□□ 1.97
C9orf3-209ENST00000460573 GRIK5Q16478 980 aa27.36■■□□□ 1.97
C9orf3-209ENST00000460573 CYP4F22Q6NT55 531 aa27.36■■□□□ 1.97
C9orf3-209ENST00000460573 POLR2AP24928 1970 aaKnown RBP27.36■■□□□ 1.97
C9orf3-209ENST00000460573 ERC2O15083 957 aa27.35■■□□□ 1.97
C9orf3-209ENST00000460573 CYP2E1P05181 493 aaPredicted RBP27.35■■□□□ 1.97
C9orf3-209ENST00000460573 MX1P20591 662 aa27.35■■□□□ 1.97
C9orf3-209ENST00000460573 CTCFP49711 727 aaPredicted RBP27.35■■□□□ 1.97
C9orf3-209ENST00000460573 TTF1Q15361 905 aaPredicted RBP27.35■■□□□ 1.97
C9orf3-209ENST00000460573 DLGAP5Q15398 846 aa27.35■■□□□ 1.97
C9orf3-209ENST00000460573 SULF1Q8IWU6 871 aa27.35■■□□□ 1.97
C9orf3-209ENST00000460573 LNPKQ9C0E8 428 aa27.35■■□□□ 1.97
C9orf3-209ENST00000460573 FOXN1O15353 648 aa27.34■■□□□ 1.97
C9orf3-209ENST00000460573 HHIPL2Q6UWX4 724 aa27.34■■□□□ 1.97
C9orf3-209ENST00000460573 CENPQQ7L2Z9 268 aaPredicted RBP27.34■■□□□ 1.97
C9orf3-209ENST00000460573 SLF2Q8IX21 1173 aa27.34■■□□□ 1.97
C9orf3-209ENST00000460573 TEKT1Q969V4 418 aa27.34■■□□□ 1.97
C9orf3-209ENST00000460573 CCDC136Q96JN2 1154 aa27.34■■□□□ 1.97
C9orf3-209ENST00000460573 LRP2BPQ9P2M1 347 aa27.34■■□□□ 1.97
C9orf3-209ENST00000460573 SALL3Q9BXA9 1300 aa27.34■■□□□ 1.97
C9orf3-209ENST00000460573 PCNTO95613 3336 aa27.34■■□□□ 1.97
C9orf3-209ENST00000460573 EGFRP00533 1210 aa27.33■■□□□ 1.97
C9orf3-209ENST00000460573 RBM5P52756 815 aaKnown RBP eCLIP27.33■■□□□ 1.97
C9orf3-209ENST00000460573 CFAP100Q494V2 611 aa27.33■■□□□ 1.97
C9orf3-209ENST00000460573 TBC1D9Q6ZT07 1266 aa27.33■■□□□ 1.97
C9orf3-209ENST00000460573 DZIP1Q86YF9 867 aaKnown RBP27.33■■□□□ 1.97
C9orf3-209ENST00000460573 ZBED3Q96IU2 234 aaPredicted RBP27.33■■□□□ 1.97
C9orf3-209ENST00000460573 HAUS7Q99871 368 aa27.33■■□□□ 1.97
C9orf3-209ENST00000460573 BOLA2Q9H3K6 86 aa27.33■■□□□ 1.97
C9orf3-209ENST00000460573 GGA3Q9NZ52 723 aa27.33■■□□□ 1.97
C9orf3-209ENST00000460573 CRKP46108 304 aa27.32■■□□□ 1.96
C9orf3-209ENST00000460573 TMED8Q6PL24 325 aaPredicted RBP27.32■■□□□ 1.96
C9orf3-209ENST00000460573 RAI14Q9P0K7 980 aa27.32■■□□□ 1.96
C9orf3-209ENST00000460573 STAP2Q9UGK3 403 aa27.32■■□□□ 1.96
C9orf3-209ENST00000460573 WNT10BO00744 389 aa27.31■■□□□ 1.96
C9orf3-209ENST00000460573 GLRX3O76003 335 aaKnown RBP27.31■■□□□ 1.96
C9orf3-209ENST00000460573 GSTO1P78417 241 aa27.31■■□□□ 1.96
C9orf3-209ENST00000460573 SAPCD2Q86UD0 394 aa27.31■■□□□ 1.96
C9orf3-209ENST00000460573 OTUD7AQ8TE49 926 aaPredicted RBP27.31■■□□□ 1.96
C9orf3-209ENST00000460573 SPDYE2BA6NHP3 402 aa27.3■■□□□ 1.96
C9orf3-209ENST00000460573 MYO1BO43795 1136 aa27.3■■□□□ 1.96
C9orf3-209ENST00000460573 CAPN15O75808 1086 aa27.3■■□□□ 1.96
C9orf3-209ENST00000460573 SPDYE6P0CI01 402 aa27.3■■□□□ 1.96
C9orf3-209ENST00000460573 C2orf69Q8N8R5 385 aa27.3■■□□□ 1.96
C9orf3-209ENST00000460573 ZDHHC15Q96MV8 337 aa27.3■■□□□ 1.96
C9orf3-209ENST00000460573 DNAJC2Q99543 621 aaKnown RBP27.3■■□□□ 1.96
C9orf3-209ENST00000460573 PAG1Q9NWQ8 432 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms