RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 CCDC87Q9NVE4 849 aa5.98□□□□□ -1.45
RFC4-211ENST00000460408 SOX1O00570 391 aaPredicted RBP5.97□□□□□ -1.45
RFC4-211ENST00000460408 CES1P23141 567 aa5.97□□□□□ -1.45
RFC4-211ENST00000460408 MAPK1P28482 360 aa5.97□□□□□ -1.45
RFC4-211ENST00000460408 VSIG10LQ86VR7 867 aa5.97□□□□□ -1.45
RFC4-211ENST00000460408 POU5F2Q8N7G0 328 aa5.97□□□□□ -1.45
RFC4-211ENST00000460408 ASB16Q96NS5 453 aa5.97□□□□□ -1.45
RFC4-211ENST00000460408 HHIPQ96QV1 700 aa5.97□□□□□ -1.45
RFC4-211ENST00000460408 METTL22Q9BUU2 404 aaPredicted RBP5.97□□□□□ -1.45
RFC4-211ENST00000460408 CYP4F12Q9HCS2 524 aa5.97□□□□□ -1.45
RFC4-211ENST00000460408 LOC100289279A0A1B0GTE1 492 aa5.96□□□□□ -1.46
RFC4-211ENST00000460408 FAM95CA0A1B0GW59 222 aa5.96□□□□□ -1.46
RFC4-211ENST00000460408 TRPA1O75762 1119 aa5.96□□□□□ -1.46
RFC4-211ENST00000460408 ITGB5P18084 799 aa5.96□□□□□ -1.46
RFC4-211ENST00000460408 ERCC3P19447 782 aa5.96□□□□□ -1.46
RFC4-211ENST00000460408 RXRBP28702 533 aa5.96□□□□□ -1.46
RFC4-211ENST00000460408 COL19A1Q14993 1142 aa5.96□□□□□ -1.46
RFC4-211ENST00000460408 VN1R5Q7Z5H4 357 aa5.96□□□□□ -1.46
RFC4-211ENST00000460408 NPAS4Q8IUM7 802 aa5.96□□□□□ -1.46
RFC4-211ENST00000460408 SHISA5Q8N114 240 aa5.96□□□□□ -1.46
RFC4-211ENST00000460408 C12orf50Q8NA57 414 aaPredicted RBP5.96□□□□□ -1.46
RFC4-211ENST00000460408 BSNDQ8WZ55 320 aa5.96□□□□□ -1.46
RFC4-211ENST00000460408 PMEPA1Q969W9 287 aa5.96□□□□□ -1.46
RFC4-211ENST00000460408 NXPE3Q969Y0 559 aa5.96□□□□□ -1.46
RFC4-211ENST00000460408 ASIC4Q96FT7 647 aa5.96□□□□□ -1.46
RFC4-211ENST00000460408 FAM129BQ96TA1 746 aa5.96□□□□□ -1.46
RFC4-211ENST00000460408 SOX17Q9H6I2 414 aaPredicted RBP5.96□□□□□ -1.46
RFC4-211ENST00000460408 NDUFB5O43674 189 aa5.95□□□□□ -1.46
RFC4-211ENST00000460408 PDGFAP04085 211 aa5.95□□□□□ -1.46
RFC4-211ENST00000460408 JUNBP17275 347 aaPredicted RBP5.95□□□□□ -1.46
RFC4-211ENST00000460408 MZF1P28698 734 aaPredicted RBP5.95□□□□□ -1.46
RFC4-211ENST00000460408 IKBKEQ14164 716 aa5.95□□□□□ -1.46
RFC4-211ENST00000460408 PAOXQ6QHF9 649 aa5.95□□□□□ -1.46
RFC4-211ENST00000460408 TMC7Q7Z402 723 aa5.95□□□□□ -1.46
RFC4-211ENST00000460408 GJD3Q8N144 294 aa5.95□□□□□ -1.46
RFC4-211ENST00000460408 EDEM1Q92611 657 aa5.95□□□□□ -1.46
RFC4-211ENST00000460408 CITED4Q96RK1 184 aa5.95□□□□□ -1.46
RFC4-211ENST00000460408 CHRDQ9H2X0 955 aa5.95□□□□□ -1.46
RFC4-211ENST00000460408 BRPF3Q9ULD4 1205 aa5.95□□□□□ -1.46
RFC4-211ENST00000460408 POLIQ9UNA4 740 aa5.95□□□□□ -1.46
RFC4-211ENST00000460408 ANKRD33BA6NCL7 494 aa5.94□□□□□ -1.46
RFC4-211ENST00000460408 DLGAP3O95886 979 aa5.94□□□□□ -1.46
RFC4-211ENST00000460408 C8AP07357 584 aa5.94□□□□□ -1.46
RFC4-211ENST00000460408 NFKBIBQ15653 356 aa5.94□□□□□ -1.46
RFC4-211ENST00000460408 EXOSC6Q5RKV6 272 aaKnown RBP5.94□□□□□ -1.46
RFC4-211ENST00000460408 CDPF1Q6NVV7 123 aa5.94□□□□□ -1.46
RFC4-211ENST00000460408 ZAR1Q86SH2 424 aa5.94□□□□□ -1.46
RFC4-211ENST00000460408 TP53INP2Q8IXH6 220 aa5.94□□□□□ -1.46
RFC4-211ENST00000460408 EZH1Q92800 747 aaPredicted RBP5.94□□□□□ -1.46
RFC4-211ENST00000460408 USP26Q9BXU7 913 aa5.94□□□□□ -1.46
RFC4-211ENST00000460408 GGNBP2Q9H3C7 697 aa5.94□□□□□ -1.46
RFC4-211ENST00000460408 BSDC1Q9NW68 430 aaPredicted RBP5.94□□□□□ -1.46
RFC4-211ENST00000460408 AMOTL2Q9Y2J4 779 aa5.94□□□□□ -1.46
RFC4-211ENST00000460408 GPR182O15218 404 aa5.93□□□□□ -1.46
RFC4-211ENST00000460408 CYP26A1O43174 497 aa5.93□□□□□ -1.46
RFC4-211ENST00000460408 DRD2P14416 443 aa5.93□□□□□ -1.46
RFC4-211ENST00000460408 PCSK2P16519 638 aa5.93□□□□□ -1.46
RFC4-211ENST00000460408 ADMP35318 185 aa5.93□□□□□ -1.46
RFC4-211ENST00000460408 USP11P51784 963 aa5.93□□□□□ -1.46
RFC4-211ENST00000460408 DNM1Q05193 864 aaKnown RBP5.93□□□□□ -1.46
RFC4-211ENST00000460408 DSC3Q14574 896 aa5.93□□□□□ -1.46
RFC4-211ENST00000460408 C2CD4AQ8NCU7 369 aaPredicted RBP5.93□□□□□ -1.46
RFC4-211ENST00000460408 FBLIM1Q8WUP2 373 aa5.93□□□□□ -1.46
RFC4-211ENST00000460408 OSMRQ99650 979 aa5.93□□□□□ -1.46
RFC4-211ENST00000460408 ZKSCAN3Q9BRR0 538 aa5.93□□□□□ -1.46
RFC4-211ENST00000460408 PRKAG2Q9UGJ0 569 aa5.93□□□□□ -1.46
RFC4-211ENST00000460408 TREHO43280 583 aa5.92□□□□□ -1.46
RFC4-211ENST00000460408 USP5P45974 858 aa5.92□□□□□ -1.46
RFC4-211ENST00000460408 FMR1Q06787 632 aaKnown RBP eCLIP5.92□□□□□ -1.46
RFC4-211ENST00000460408 AAMPQ13685 434 aa5.92□□□□□ -1.46
RFC4-211ENST00000460408 ZSCAN29Q8IWY8 852 aaPredicted RBP5.92□□□□□ -1.46
RFC4-211ENST00000460408 GATA6Q92908 595 aa5.92□□□□□ -1.46
RFC4-211ENST00000460408 ALKBH8Q96BT7 664 aaKnown RBP5.92□□□□□ -1.46
RFC4-211ENST00000460408 DMRTB1Q96MA1 342 aa5.92□□□□□ -1.46
RFC4-211ENST00000460408 TBC1D32Q96NH3 1257 aa5.92□□□□□ -1.46
RFC4-211ENST00000460408 KRTAP4-9Q9BYQ8 210 aa5.92□□□□□ -1.46
RFC4-211ENST00000460408 BHLHE41Q9C0J9 482 aaPredicted RBP5.92□□□□□ -1.46
RFC4-211ENST00000460408 A6NHS1 94 aa5.91□□□□□ -1.46
RFC4-211ENST00000460408 EIF4EBP3O60516 100 aaPredicted RBP5.91□□□□□ -1.46
RFC4-211ENST00000460408 ESRRAP11474 423 aaPredicted RBP5.91□□□□□ -1.46
RFC4-211ENST00000460408 SOX4Q06945 474 aaPredicted RBP5.91□□□□□ -1.46
RFC4-211ENST00000460408 PDE3BQ13370 1112 aa5.91□□□□□ -1.46
RFC4-211ENST00000460408 FBXO33Q7Z6M2 555 aa5.91□□□□□ -1.46
RFC4-211ENST00000460408 AGBL5Q8NDL9 886 aa5.91□□□□□ -1.46
RFC4-211ENST00000460408 YIPF2Q9BWQ6 316 aa5.91□□□□□ -1.46
RFC4-211ENST00000460408 PAK6Q9NQU5 681 aaPredicted RBP5.91□□□□□ -1.46
RFC4-211ENST00000460408 RBM47A0AV96 593 aaKnown RBP5.9□□□□□ -1.46
RFC4-211ENST00000460408 EDN3P14138 238 aa5.9□□□□□ -1.46
RFC4-211ENST00000460408 C8orf34Q49A92 452 aa5.9□□□□□ -1.46
RFC4-211ENST00000460408 FLCNQ8NFG4 579 aa5.9□□□□□ -1.46
RFC4-211ENST00000460408 NRSN2Q9GZP1 204 aa5.9□□□□□ -1.46
RFC4-211ENST00000460408 FAM170BA6NMN3 283 aa5.89□□□□□ -1.47
RFC4-211ENST00000460408 EREGO14944 169 aa5.89□□□□□ -1.47
RFC4-211ENST00000460408 P4HBP07237 508 aaKnown RBP5.89□□□□□ -1.47
RFC4-211ENST00000460408 EHHADHQ08426 723 aa5.89□□□□□ -1.47
RFC4-211ENST00000460408 TTC16Q8NEE8 873 aa5.89□□□□□ -1.47
RFC4-211ENST00000460408 ZNF428Q96B54 188 aa5.89□□□□□ -1.47
RFC4-211ENST00000460408 ADH5P11766 374 aa5.88□□□□□ -1.47
RFC4-211ENST00000460408 CYP27A1Q02318 531 aa5.88□□□□□ -1.47
RFC4-211ENST00000460408 GSTM4Q03013 218 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms