RNA–Protein interactions for RNA: ENST00000460207.1

RUNX1-209, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-209ENST00000460207 FBXO46Q6PJ61 603 aaPredicted RBP20.54■□□□□ 0.88
RUNX1-209ENST00000460207 VGLL2Q8N8G2 317 aa20.54■□□□□ 0.88
RUNX1-209ENST00000460207 TDRD3Q9H7E2 651 aaKnown RBP20.54■□□□□ 0.88
RUNX1-209ENST00000460207 ALDH1L2Q3SY69 923 aa20.53■□□□□ 0.88
RUNX1-209ENST00000460207 OTUD7BQ6GQQ9 843 aa20.53■□□□□ 0.88
RUNX1-209ENST00000460207 KIF16BQ96L93 1317 aa20.53■□□□□ 0.88
RUNX1-209ENST00000460207 TNNI2P48788 182 aa20.52■□□□□ 0.88
RUNX1-209ENST00000460207 SOX10P56693 466 aa20.52■□□□□ 0.88
RUNX1-209ENST00000460207 TEPSINQ96N21 525 aa20.52■□□□□ 0.88
RUNX1-209ENST00000460207 SUGT1Q9Y2Z0 365 aa20.52■□□□□ 0.88
RUNX1-209ENST00000460207 TESPA1A2RU30 521 aaPredicted RBP20.51■□□□□ 0.87
RUNX1-209ENST00000460207 FRAT2O75474 233 aaPredicted RBP20.51■□□□□ 0.87
RUNX1-209ENST00000460207 IGF2BP3O00425 579 aaKnown RBP eCLIP20.5■□□□□ 0.87
RUNX1-209ENST00000460207 IFIT1P09914 478 aaKnown RBP20.49■□□□□ 0.87
RUNX1-209ENST00000460207 FGFR2P21802 821 aa20.49■□□□□ 0.87
RUNX1-209ENST00000460207 BCAMP50895 628 aa20.49■□□□□ 0.87
RUNX1-209ENST00000460207 PUM3Q15397 648 aaKnown RBP20.49■□□□□ 0.87
RUNX1-209ENST00000460207 FKBP1CQ5VVH2 108 aa20.49■□□□□ 0.87
RUNX1-209ENST00000460207 TRMT2AQ8IZ69 625 aaKnown RBP20.49■□□□□ 0.87
RUNX1-209ENST00000460207 TEKT1Q969V4 418 aa20.49■□□□□ 0.87
RUNX1-209ENST00000460207 IQSEC3Q9UPP2 1182 aaPredicted RBP20.49■□□□□ 0.87
RUNX1-209ENST00000460207 LAMB1P07942 1786 aa20.49■□□□□ 0.87
RUNX1-209ENST00000460207 TCP10L2B9ZVM9 353 aa20.48■□□□□ 0.87
RUNX1-209ENST00000460207 EYA2O00167 538 aa20.48■□□□□ 0.87
RUNX1-209ENST00000460207 CT47B1P0C2W7 299 aaPredicted RBP20.48■□□□□ 0.87
RUNX1-209ENST00000460207 GJA5P36382 358 aa20.48■□□□□ 0.87
RUNX1-209ENST00000460207 MAP3K9P80192 1104 aa20.48■□□□□ 0.87
RUNX1-209ENST00000460207 CHAF1AQ13111 956 aaPredicted RBP20.48■□□□□ 0.87
RUNX1-209ENST00000460207 GRIK5Q16478 980 aa20.48■□□□□ 0.87
RUNX1-209ENST00000460207 KLHDC4Q8TBB5 520 aa20.48■□□□□ 0.87
RUNX1-209ENST00000460207 ZDHHC15Q96MV8 337 aa20.48■□□□□ 0.87
RUNX1-209ENST00000460207 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.48■□□□□ 0.87
RUNX1-209ENST00000460207 FBXO3Q9UK99 471 aa20.48■□□□□ 0.87
RUNX1-209ENST00000460207 SLC34A2O95436 690 aa20.47■□□□□ 0.87
RUNX1-209ENST00000460207 RFX5P48382 616 aaPredicted RBP20.47■□□□□ 0.87
RUNX1-209ENST00000460207 HHIPL2Q6UWX4 724 aa20.47■□□□□ 0.87
RUNX1-209ENST00000460207 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.47■□□□□ 0.87
RUNX1-209ENST00000460207 FAM83AQ86UY5 434 aa20.47■□□□□ 0.87
RUNX1-209ENST00000460207 OPTNQ96CV9 577 aa20.47■□□□□ 0.87
RUNX1-209ENST00000460207 PTPN18Q99952 460 aa20.47■□□□□ 0.87
RUNX1-209ENST00000460207 TMEM39BQ9GZU3 492 aa20.47■□□□□ 0.87
RUNX1-209ENST00000460207 MAST3O60307 1309 aa20.47■□□□□ 0.87
RUNX1-209ENST00000460207 LPIN2Q92539 896 aa20.46■□□□□ 0.87
RUNX1-209ENST00000460207 HOOK2Q96ED9 719 aa20.46■□□□□ 0.87
RUNX1-209ENST00000460207 ERO1AQ96HE7 468 aa20.46■□□□□ 0.87
RUNX1-209ENST00000460207 MS4A4AQ96JQ5 239 aa20.46■□□□□ 0.87
RUNX1-209ENST00000460207 HDAC5Q9UQL6 1122 aa20.46■□□□□ 0.87
RUNX1-209ENST00000460207 ARAP2Q8WZ64 1704 aa20.45■□□□□ 0.86
RUNX1-209ENST00000460207 APOBEC3HQ6NTF7 200 aaKnown RBP20.45■□□□□ 0.86
RUNX1-209ENST00000460207 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.45■□□□□ 0.86
RUNX1-209ENST00000460207 WDR66Q8TBY9 1149 aa20.45■□□□□ 0.86
RUNX1-209ENST00000460207 ELP3Q9H9T3 547 aa20.45■□□□□ 0.86
RUNX1-209ENST00000460207 TMOD2Q9NZR1 351 aa20.45■□□□□ 0.86
RUNX1-209ENST00000460207 CSADQ9Y600 493 aa20.45■□□□□ 0.86
RUNX1-209ENST00000460207 SLC5A1P13866 664 aa20.44■□□□□ 0.86
RUNX1-209ENST00000460207 GTF2A2P52657 109 aa20.44■□□□□ 0.86
RUNX1-209ENST00000460207 CRHR2Q13324 411 aa20.44■□□□□ 0.86
RUNX1-209ENST00000460207 INTS3Q68E01 1043 aaKnown RBP20.44■□□□□ 0.86
RUNX1-209ENST00000460207 OTOP1Q7RTM1 612 aa20.44■□□□□ 0.86
RUNX1-209ENST00000460207 ATG9AQ7Z3C6 839 aa20.44■□□□□ 0.86
RUNX1-209ENST00000460207 CDAN1Q8IWY9 1227 aa20.44■□□□□ 0.86
RUNX1-209ENST00000460207 CDCA7LQ96GN5 454 aa20.44■□□□□ 0.86
RUNX1-209ENST00000460207 SMC4Q9NTJ3 1288 aa20.44■□□□□ 0.86
RUNX1-209ENST00000460207 TRIM17Q9Y577 477 aa20.44■□□□□ 0.86
RUNX1-209ENST00000460207 VGLL4Q14135 290 aa20.43■□□□□ 0.86
RUNX1-209ENST00000460207 CIAO1O76071 339 aa20.42■□□□□ 0.86
RUNX1-209ENST00000460207 UBTFL1P0CB47 393 aaPredicted RBP20.42■□□□□ 0.86
RUNX1-209ENST00000460207 SP3Q02447 781 aa20.42■□□□□ 0.86
RUNX1-209ENST00000460207 HTTP42858 3142 aa20.42■□□□□ 0.86
RUNX1-209ENST00000460207 ZBTB22O15209 634 aa20.41■□□□□ 0.86
RUNX1-209ENST00000460207 ARHGEF6Q15052 776 aa20.41■□□□□ 0.86
RUNX1-209ENST00000460207 BRI3BPQ8WY22 251 aa20.41■□□□□ 0.86
RUNX1-209ENST00000460207 CEP126Q9P2H0 1117 aa20.41■□□□□ 0.86
RUNX1-209ENST00000460207 KIAA0100Q14667 2235 aaKnown RBP20.41■□□□□ 0.86
RUNX1-209ENST00000460207 SPDYE5A6NIY4 337 aa20.4■□□□□ 0.86
RUNX1-209ENST00000460207 CACNB3P54284 484 aa20.4■□□□□ 0.86
RUNX1-209ENST00000460207 DCAF15Q66K64 600 aa20.4■□□□□ 0.86
RUNX1-209ENST00000460207 ERO1BQ86YB8 467 aa20.4■□□□□ 0.86
RUNX1-209ENST00000460207 API5Q9BZZ5 524 aaKnown RBP20.4■□□□□ 0.86
RUNX1-209ENST00000460207 EFCC1Q9HA90 598 aa20.4■□□□□ 0.86
RUNX1-209ENST00000460207 GNL3LQ9NVN8 582 aaKnown RBP20.4■□□□□ 0.86
RUNX1-209ENST00000460207 PTPN22Q9Y2R2 807 aa20.4■□□□□ 0.86
RUNX1-209ENST00000460207 CCL15-CCL14A0A0B4J2E2 113 aa20.39■□□□□ 0.85
RUNX1-209ENST00000460207 CCL15Q16663 113 aa20.39■□□□□ 0.85
RUNX1-209ENST00000460207 CNKSR2Q8WXI2 1034 aa20.39■□□□□ 0.85
RUNX1-209ENST00000460207 ZFYVE28Q9HCC9 887 aa20.39■□□□□ 0.85
RUNX1-209ENST00000460207 ZCCHC17Q9NP64 241 aaKnown RBP20.39■□□□□ 0.85
RUNX1-209ENST00000460207 NOB1Q9ULX3 412 aaKnown RBP20.39■□□□□ 0.85
RUNX1-209ENST00000460207 OTOFQ9HC10 1997 aa20.39■□□□□ 0.85
RUNX1-209ENST00000460207 SEMA3EO15041 775 aa20.38■□□□□ 0.85
RUNX1-209ENST00000460207 WDHD1O75717 1129 aaPredicted RBP20.38■□□□□ 0.85
RUNX1-209ENST00000460207 IL15P40933 162 aaPredicted RBP20.38■□□□□ 0.85
RUNX1-209ENST00000460207 PRPF38BQ5VTL8 546 aaKnown RBP20.38■□□□□ 0.85
RUNX1-209ENST00000460207 CD99L2Q8TCZ2 262 aa20.38■□□□□ 0.85
RUNX1-209ENST00000460207 FAM151AQ8WW52 585 aa20.38■□□□□ 0.85
RUNX1-209ENST00000460207 OTUD5Q96G74 571 aa20.38■□□□□ 0.85
RUNX1-209ENST00000460207 RPAP1Q9BWH6 1393 aaPredicted RBP20.37■□□□□ 0.85
RUNX1-209ENST00000460207 CETPP11597 493 aa20.37■□□□□ 0.85
RUNX1-209ENST00000460207 TAF1CQ15572 869 aaPredicted RBP20.37■□□□□ 0.85
RUNX1-209ENST00000460207 ATP2B3Q16720 1220 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms