RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 AIDAQ96BJ3 306 aa21.17■□□□□ 0.98
HPS3-202ENST00000460120 BECN2A8MW95 431 aa21.17■□□□□ 0.98
HPS3-202ENST00000460120 PDE8AO60658 829 aa21.17■□□□□ 0.98
HPS3-202ENST00000460120 MARCKSP29966 332 aaPredicted RBP21.17■□□□□ 0.98
HPS3-202ENST00000460120 RRP12Q5JTH9 1297 aaKnown RBP21.17■□□□□ 0.98
HPS3-202ENST00000460120 GLIPR1L2Q4G1C9 344 aa21.16■□□□□ 0.98
HPS3-202ENST00000460120 MAGEB6Q8N7X4 407 aa21.16■□□□□ 0.98
HPS3-202ENST00000460120 VGLL2Q8N8G2 317 aa21.16■□□□□ 0.98
HPS3-202ENST00000460120 FBXO3Q9UK99 471 aa21.16■□□□□ 0.98
HPS3-202ENST00000460120 FAM160A1Q05DH4 1040 aa21.16■□□□□ 0.98
HPS3-202ENST00000460120 ARID5BQ14865 1188 aa21.16■□□□□ 0.98
HPS3-202ENST00000460120 TDRD7Q8NHU6 1098 aaKnown RBP21.16■□□□□ 0.98
HPS3-202ENST00000460120 CDHR2Q9BYE9 1310 aa21.16■□□□□ 0.98
HPS3-202ENST00000460120 CCDC144BQ3MJ40 725 aa21.15■□□□□ 0.98
HPS3-202ENST00000460120 SUSD4Q5VX71 490 aa21.15■□□□□ 0.98
HPS3-202ENST00000460120 ARMT1Q9H993 441 aa21.15■□□□□ 0.98
HPS3-202ENST00000460120 NEDD4P46934 1319 aa21.15■□□□□ 0.98
HPS3-202ENST00000460120 METAP2P50579 478 aaKnown RBP eCLIP21.15■□□□□ 0.98
HPS3-202ENST00000460120 STX1AQ16623 288 aa21.15■□□□□ 0.98
HPS3-202ENST00000460120 CCDC82Q8N4S0 544 aa21.15■□□□□ 0.98
HPS3-202ENST00000460120 MRPS27Q92552 414 aaKnown RBP21.15■□□□□ 0.98
HPS3-202ENST00000460120 ZKSCAN3Q9BRR0 538 aa21.15■□□□□ 0.98
HPS3-202ENST00000460120 NWD2Q9ULI1 1742 aa21.15■□□□□ 0.98
HPS3-202ENST00000460120 DHX16O60231 1041 aaKnown RBP21.14■□□□□ 0.98
HPS3-202ENST00000460120 TERF1P54274 439 aa21.14■□□□□ 0.98
HPS3-202ENST00000460120 GNL2Q13823 731 aaKnown RBP21.14■□□□□ 0.98
HPS3-202ENST00000460120 FBXO18Q8NFZ0 1043 aa21.14■□□□□ 0.98
HPS3-202ENST00000460120 MPHOSPH8Q99549 860 aa21.14■□□□□ 0.98
HPS3-202ENST00000460120 PRKAB2O43741 272 aa21.14■□□□□ 0.97
HPS3-202ENST00000460120 MBD4O95243 580 aa21.14■□□□□ 0.97
HPS3-202ENST00000460120 ZSCAN25Q6NSZ9 544 aa21.14■□□□□ 0.97
HPS3-202ENST00000460120 SYNE3Q6ZMZ3 975 aa21.14■□□□□ 0.97
HPS3-202ENST00000460120 AOPEPQ8N6M6 819 aa21.14■□□□□ 0.97
HPS3-202ENST00000460120 CDC27P30260 824 aa21.13■□□□□ 0.97
HPS3-202ENST00000460120 PLA2G4DQ86XP0 818 aa21.13■□□□□ 0.97
HPS3-202ENST00000460120 LINC00301Q8NCQ3 95 aa21.13■□□□□ 0.97
HPS3-202ENST00000460120 ENGASEQ8NFI3 743 aa21.13■□□□□ 0.97
HPS3-202ENST00000460120 BCL9O00512 1426 aa21.13■□□□□ 0.97
HPS3-202ENST00000460120 RASGRF1Q13972 1273 aa21.13■□□□□ 0.97
HPS3-202ENST00000460120 IQCB1Q15051 598 aa21.13■□□□□ 0.97
HPS3-202ENST00000460120 PUM3Q15397 648 aaKnown RBP21.13■□□□□ 0.97
HPS3-202ENST00000460120 MIGA1Q8NAN2 632 aa21.13■□□□□ 0.97
HPS3-202ENST00000460120 ALG1Q9BT22 464 aa21.13■□□□□ 0.97
HPS3-202ENST00000460120 ANGEL1Q9UNK9 670 aaKnown RBP21.13■□□□□ 0.97
HPS3-202ENST00000460120 BCAMP50895 628 aa21.13■□□□□ 0.97
HPS3-202ENST00000460120 MYSM1Q5VVJ2 828 aa21.13■□□□□ 0.97
HPS3-202ENST00000460120 FILIP1Q7Z7B0 1213 aa21.13■□□□□ 0.97
HPS3-202ENST00000460120 C16orf45Q96MC5 204 aaPredicted RBP21.13■□□□□ 0.97
HPS3-202ENST00000460120 SPTLC2O15270 562 aa21.12■□□□□ 0.97
HPS3-202ENST00000460120 ATP6V1AP38606 617 aa21.12■□□□□ 0.97
HPS3-202ENST00000460120 TTF1Q15361 905 aaPredicted RBP21.12■□□□□ 0.97
HPS3-202ENST00000460120 SPATA5Q8NB90 893 aa21.12■□□□□ 0.97
HPS3-202ENST00000460120 SPTLC3Q9NUV7 552 aa21.12■□□□□ 0.97
HPS3-202ENST00000460120 RTEL1Q9NZ71 1219 aa21.12■□□□□ 0.97
HPS3-202ENST00000460120 EVCP57679 992 aa21.11■□□□□ 0.97
HPS3-202ENST00000460120 CMTR1Q8N1G2 835 aaKnown RBP21.11■□□□□ 0.97
HPS3-202ENST00000460120 NAPBQ9H115 298 aa21.11■□□□□ 0.97
HPS3-202ENST00000460120 ABCA3Q99758 1704 aa21.11■□□□□ 0.97
HPS3-202ENST00000460120 WTIPA6NIX2 430 aaPredicted RBP21.11■□□□□ 0.97
HPS3-202ENST00000460120 KCNQ4P56696 695 aa21.11■□□□□ 0.97
HPS3-202ENST00000460120 ZRSR1Q15695 479 aaKnown RBP21.11■□□□□ 0.97
HPS3-202ENST00000460120 TMEM67Q5HYA8 995 aa21.11■□□□□ 0.97
HPS3-202ENST00000460120 SMIM5Q71RC9 77 aa21.11■□□□□ 0.97
HPS3-202ENST00000460120 FMR1NBQ8N0W7 255 aaPredicted RBP21.11■□□□□ 0.97
HPS3-202ENST00000460120 CACTINQ8WUQ7 758 aaKnown RBP21.11■□□□□ 0.97
HPS3-202ENST00000460120 LPIN2Q92539 896 aa21.11■□□□□ 0.97
HPS3-202ENST00000460120 KIF23Q02241 960 aaPredicted RBP21.1■□□□□ 0.97
HPS3-202ENST00000460120 MYRIPQ8NFW9 859 aa21.1■□□□□ 0.97
HPS3-202ENST00000460120 STRBPQ96SI9 672 aaKnown RBP21.1■□□□□ 0.97
HPS3-202ENST00000460120 EPB41L4AQ9HCS5 686 aaPredicted RBP21.1■□□□□ 0.97
HPS3-202ENST00000460120 SH2B2O14492 632 aaPredicted RBP21.1■□□□□ 0.97
HPS3-202ENST00000460120 DYNC1I1O14576 645 aa21.1■□□□□ 0.97
HPS3-202ENST00000460120 CTAGE5O15320 804 aa21.09■□□□□ 0.97
HPS3-202ENST00000460120 TPM3P06753 285 aa21.09■□□□□ 0.97
HPS3-202ENST00000460120 SLC5A1P13866 664 aa21.09■□□□□ 0.97
HPS3-202ENST00000460120 ADALQ6DHV7 355 aa21.09■□□□□ 0.97
HPS3-202ENST00000460120 APOA5Q6Q788 366 aa21.09■□□□□ 0.97
HPS3-202ENST00000460120 DHX40Q8IX18 779 aaKnown RBP21.09■□□□□ 0.97
HPS3-202ENST00000460120 GOLGA8AA7E2F4 631 aa21.09■□□□□ 0.97
HPS3-202ENST00000460120 UBE3CQ15386 1083 aa21.09■□□□□ 0.97
HPS3-202ENST00000460120 DPCR1Q3MIW9 517 aa21.09■□□□□ 0.97
HPS3-202ENST00000460120 ZNF34Q8IZ26 560 aa21.09■□□□□ 0.97
HPS3-202ENST00000460120 TACC3Q9Y6A5 838 aa21.09■□□□□ 0.97
HPS3-202ENST00000460120 TCRBV5S4A2TA0A5A2 114 aa21.08■□□□□ 0.97
HPS3-202ENST00000460120 IFIT3O14879 490 aaKnown RBP21.08■□□□□ 0.97
HPS3-202ENST00000460120 IL6STP40189 918 aaPredicted RBP21.08■□□□□ 0.97
HPS3-202ENST00000460120 CRKLP46109 303 aaKnown RBP21.08■□□□□ 0.97
HPS3-202ENST00000460120 ANO1Q5XXA6 986 aa21.08■□□□□ 0.97
HPS3-202ENST00000460120 ANO10Q9NW15 660 aa21.08■□□□□ 0.97
HPS3-202ENST00000460120 ZBTB43O43298 467 aa21.08■□□□□ 0.96
HPS3-202ENST00000460120 TDO2P48775 406 aa21.08■□□□□ 0.96
HPS3-202ENST00000460120 KRT40Q6A162 431 aa21.08■□□□□ 0.96
HPS3-202ENST00000460120 CEP57L1Q8IYX8 460 aa21.08■□□□□ 0.96
HPS3-202ENST00000460120 IFNL3Q8IZI9 196 aa21.08■□□□□ 0.96
HPS3-202ENST00000460120 SLC26A6Q9BXS9 759 aa21.08■□□□□ 0.96
HPS3-202ENST00000460120 PDCL3Q9H2J4 239 aa21.08■□□□□ 0.96
HPS3-202ENST00000460120 NIP7Q9Y221 180 aaKnown RBP eCLIP21.08■□□□□ 0.96
HPS3-202ENST00000460120 ZMYM6O95789 1325 aa21.08■□□□□ 0.96
HPS3-202ENST00000460120 NUTM2BA6NNL0 878 aaPredicted RBP21.07■□□□□ 0.96
HPS3-202ENST00000460120 NUTM2EB1AL46 878 aaPredicted RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms