RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 TTF2Q9UNY4 1162 aaKnown RBP26.74■■□□□ 1.87
SSNA1-202ENST00000459860 POLR2AP24928 1970 aaKnown RBP26.73■■□□□ 1.87
SSNA1-202ENST00000459860 MAST3O60307 1309 aa26.73■■□□□ 1.87
SSNA1-202ENST00000459860 DLGAP5Q15398 846 aa26.73■■□□□ 1.87
SSNA1-202ENST00000459860 BEGAINQ9BUH8 593 aa26.73■■□□□ 1.87
SSNA1-202ENST00000459860 COL1A1P02452 1464 aaPredicted RBP26.73■■□□□ 1.87
SSNA1-202ENST00000459860 ZBTB22O15209 634 aa26.72■■□□□ 1.87
SSNA1-202ENST00000459860 RAB11FIP3O75154 756 aa26.72■■□□□ 1.87
SSNA1-202ENST00000459860 KIF1BPQ96EK5 621 aa26.72■■□□□ 1.87
SSNA1-202ENST00000459860 SUGT1Q9Y2Z0 365 aa26.72■■□□□ 1.87
SSNA1-202ENST00000459860 SUPT16HQ9Y5B9 1047 aaKnown RBP26.72■■□□□ 1.87
SSNA1-202ENST00000459860 APBB1O00213 710 aa26.71■■□□□ 1.87
SSNA1-202ENST00000459860 RBM5P52756 815 aaKnown RBP eCLIP26.71■■□□□ 1.87
SSNA1-202ENST00000459860 CCDC158Q5M9N0 1113 aa26.71■■□□□ 1.87
SSNA1-202ENST00000459860 ANGEL2Q5VTE6 544 aaKnown RBP26.71■■□□□ 1.87
SSNA1-202ENST00000459860 SULF1Q8IWU6 871 aa26.71■■□□□ 1.87
SSNA1-202ENST00000459860 ZGPATQ8N5A5 531 aaKnown RBP26.71■■□□□ 1.87
SSNA1-202ENST00000459860 RHPN1Q8TCX5 695 aa26.71■■□□□ 1.87
SSNA1-202ENST00000459860 TSKSQ9UJT2 592 aa26.71■■□□□ 1.87
SSNA1-202ENST00000459860 PDS5AQ29RF7 1337 aaKnown RBP26.7■■□□□ 1.87
SSNA1-202ENST00000459860 PITPNM2Q9BZ72 1349 aa26.7■■□□□ 1.87
SSNA1-202ENST00000459860 WNT10BO00744 389 aa26.7■■□□□ 1.86
SSNA1-202ENST00000459860 MYO1BO43795 1136 aa26.7■■□□□ 1.86
SSNA1-202ENST00000459860 UQCRFS1P1P0C7P4 283 aa26.7■■□□□ 1.86
SSNA1-202ENST00000459860 NBPF9Q3BBW0 867 aa26.7■■□□□ 1.86
SSNA1-202ENST00000459860 CFAP100Q494V2 611 aa26.7■■□□□ 1.86
SSNA1-202ENST00000459860 TTC39AQ5SRH9 613 aa26.7■■□□□ 1.86
SSNA1-202ENST00000459860 KRT26Q7Z3Y9 468 aa26.7■■□□□ 1.86
SSNA1-202ENST00000459860 SERPINA10Q9UK55 444 aa26.7■■□□□ 1.86
SSNA1-202ENST00000459860 AAMPQ13685 434 aa26.69■■□□□ 1.86
SSNA1-202ENST00000459860 RASGRF1Q13972 1273 aa26.69■■□□□ 1.86
SSNA1-202ENST00000459860 CLASRPQ8N2M8 674 aaKnown RBP26.69■■□□□ 1.86
SSNA1-202ENST00000459860 MTMR14Q8NCE2 650 aa26.69■■□□□ 1.86
SSNA1-202ENST00000459860 ZIC5Q96T25 663 aa26.69■■□□□ 1.86
SSNA1-202ENST00000459860 DBNDD2Q9BQY9 259 aa26.69■■□□□ 1.86
SSNA1-202ENST00000459860 SALL1Q9NSC2 1324 aa26.68■■□□□ 1.86
SSNA1-202ENST00000459860 ARID4AP29374 1257 aaPredicted RBP26.68■■□□□ 1.86
SSNA1-202ENST00000459860 AACSQ86V21 672 aa26.68■■□□□ 1.86
SSNA1-202ENST00000459860 ASTN2O75129 1339 aaPredicted RBP26.67■■□□□ 1.86
SSNA1-202ENST00000459860 CCDC8Q9H0W5 538 aaPredicted RBP26.67■■□□□ 1.86
SSNA1-202ENST00000459860 IL1RAPL2Q9NP60 686 aa26.67■■□□□ 1.86
SSNA1-202ENST00000459860 ADM5C9JUS6 153 aa26.66■■□□□ 1.86
SSNA1-202ENST00000459860 CA12O43570 354 aa26.66■■□□□ 1.86
SSNA1-202ENST00000459860 LDHBP07195 334 aaKnown RBP26.66■■□□□ 1.86
SSNA1-202ENST00000459860 HUNKP57058 714 aa26.66■■□□□ 1.86
SSNA1-202ENST00000459860 HDLBPQ00341 1268 aaKnown RBP26.66■■□□□ 1.86
SSNA1-202ENST00000459860 APOBEC3FQ8IUX4 373 aaKnown RBP26.66■■□□□ 1.86
SSNA1-202ENST00000459860 TEKT1Q969V4 418 aa26.66■■□□□ 1.86
SSNA1-202ENST00000459860 EAF2Q96CJ1 260 aaPredicted RBP26.66■■□□□ 1.86
SSNA1-202ENST00000459860 SPDYE2BA6NHP3 402 aa26.65■■□□□ 1.86
SSNA1-202ENST00000459860 SPDYE6P0CI01 402 aa26.65■■□□□ 1.86
SSNA1-202ENST00000459860 CRKP46108 304 aa26.65■■□□□ 1.86
SSNA1-202ENST00000459860 SPATA5Q8NB90 893 aa26.65■■□□□ 1.86
SSNA1-202ENST00000459860 ZBED3Q96IU2 234 aaPredicted RBP26.65■■□□□ 1.86
SSNA1-202ENST00000459860 DBNLQ9UJU6 430 aaKnown RBP26.65■■□□□ 1.86
SSNA1-202ENST00000459860 FAM155AB1AL88 458 aaPredicted RBP26.64■■□□□ 1.86
SSNA1-202ENST00000459860 NOGQ13253 232 aa26.64■■□□□ 1.86
SSNA1-202ENST00000459860 GRIK5Q16478 980 aa26.64■■□□□ 1.86
SSNA1-202ENST00000459860 SPTY2D1Q68D10 685 aaPredicted RBP26.64■■□□□ 1.86
SSNA1-202ENST00000459860 HMG20BQ9P0W2 317 aa26.64■■□□□ 1.86
SSNA1-202ENST00000459860 ABCF2Q9UG63 623 aa26.64■■□□□ 1.86
SSNA1-202ENST00000459860 PCDHB15Q9Y5E8 787 aa26.64■■□□□ 1.86
SSNA1-202ENST00000459860 IFIT2P09913 472 aaKnown RBP26.63■■□□□ 1.85
SSNA1-202ENST00000459860 LRRCC1Q9C099 1032 aa26.63■■□□□ 1.85
SSNA1-202ENST00000459860 BCL11AQ9H165 835 aa26.63■■□□□ 1.85
SSNA1-202ENST00000459860 GBA2Q9HCG7 927 aaPredicted RBP26.63■■□□□ 1.85
SSNA1-202ENST00000459860 TLR7Q9NYK1 1049 aaKnown RBP26.63■■□□□ 1.85
SSNA1-202ENST00000459860 PRDX5P30044 214 aa26.62■■□□□ 1.85
SSNA1-202ENST00000459860 DZIP1Q86YF9 867 aaKnown RBP26.62■■□□□ 1.85
SSNA1-202ENST00000459860 PRMT6Q96LA8 375 aaPredicted RBP26.62■■□□□ 1.85
SSNA1-202ENST00000459860 MRIQ9BWK5 157 aa26.62■■□□□ 1.85
SSNA1-202ENST00000459860 AKAP11Q9UKA4 1901 aa26.61■■□□□ 1.85
SSNA1-202ENST00000459860 MCAMP43121 646 aa26.61■■□□□ 1.85
SSNA1-202ENST00000459860 RGMBQ6NW40 437 aa26.61■■□□□ 1.85
SSNA1-202ENST00000459860 ZNF512BQ96KM6 892 aaPredicted RBP26.61■■□□□ 1.85
SSNA1-202ENST00000459860 DCTPP1Q9H773 170 aa26.61■■□□□ 1.85
SSNA1-202ENST00000459860 VEZTQ9HBM0 779 aa26.61■■□□□ 1.85
SSNA1-202ENST00000459860 PCDHAC2Q9Y5I4 1007 aa26.61■■□□□ 1.85
SSNA1-202ENST00000459860 MYH2Q9UKX2 1941 aa26.61■■□□□ 1.85
SSNA1-202ENST00000459860 ERICH6Q7L0X2 663 aa26.6■■□□□ 1.85
SSNA1-202ENST00000459860 SLF2Q8IX21 1173 aa26.6■■□□□ 1.85
SSNA1-202ENST00000459860 MAST2Q6P0Q8 1798 aa26.6■■□□□ 1.85
SSNA1-202ENST00000459860 CLRN2A0PK11 232 aa26.59■■□□□ 1.85
SSNA1-202ENST00000459860 HHIPL2Q6UWX4 724 aa26.59■■□□□ 1.85
SSNA1-202ENST00000459860 PI16Q6UXB8 463 aa26.59■■□□□ 1.85
SSNA1-202ENST00000459860 C2orf69Q8N8R5 385 aa26.59■■□□□ 1.85
SSNA1-202ENST00000459860 CDCA5Q96FF9 252 aa26.59■■□□□ 1.85
SSNA1-202ENST00000459860 ZDHHC15Q96MV8 337 aa26.59■■□□□ 1.85
SSNA1-202ENST00000459860 TNFAIP1Q13829 316 aa26.58■■□□□ 1.85
SSNA1-202ENST00000459860 TMOD2Q9NZR1 351 aa26.58■■□□□ 1.85
SSNA1-202ENST00000459860 SPDYE2Q495Y8 402 aa26.57■■□□□ 1.84
SSNA1-202ENST00000459860 EXOC6Q8TAG9 804 aa26.57■■□□□ 1.84
SSNA1-202ENST00000459860 TDRD3Q9H7E2 651 aaKnown RBP26.57■■□□□ 1.84
SSNA1-202ENST00000459860 SNRKQ9NRH2 765 aa26.57■■□□□ 1.84
SSNA1-202ENST00000459860 SCAF8Q9UPN6 1271 aaKnown RBP26.57■■□□□ 1.84
SSNA1-202ENST00000459860 PPP2R3BQ9Y5P8 575 aa26.57■■□□□ 1.84
SSNA1-202ENST00000459860 NF2P35240 595 aa26.56■■□□□ 1.84
SSNA1-202ENST00000459860 DIXDC1Q155Q3 683 aa26.56■■□□□ 1.84
SSNA1-202ENST00000459860 RAI14Q9P0K7 980 aa26.56■■□□□ 1.84
SSNA1-202ENST00000459860 LRP2BPQ9P2M1 347 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms