RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 CASP7P55210 303 aa14.4□□□□□ -0.1
PRAMEF35P-201ENST00000458709 FKBP1AP62942 108 aaKnown RBP14.4□□□□□ -0.1
PRAMEF35P-201ENST00000458709 SPDYE2Q495Y8 402 aa14.4□□□□□ -0.1
PRAMEF35P-201ENST00000458709 ZNF804AQ7Z570 1209 aa14.4□□□□□ -0.1
PRAMEF35P-201ENST00000458709 TEPSINQ96N21 525 aa14.4□□□□□ -0.1
PRAMEF35P-201ENST00000458709 ZNF70Q9UC06 446 aaPredicted RBP14.4□□□□□ -0.1
PRAMEF35P-201ENST00000458709 A0A1B0GUL6 1792 aa14.39□□□□□ -0.11
PRAMEF35P-201ENST00000458709 RANBP2P49792 3224 aaKnown RBP14.39□□□□□ -0.11
PRAMEF35P-201ENST00000458709 ECM2O94769 699 aaPredicted RBP14.39□□□□□ -0.11
PRAMEF35P-201ENST00000458709 CSF1RP07333 972 aa14.39□□□□□ -0.11
PRAMEF35P-201ENST00000458709 LACTBP83111 547 aaPredicted RBP14.39□□□□□ -0.11
PRAMEF35P-201ENST00000458709 TNFAIP1Q13829 316 aa14.39□□□□□ -0.11
PRAMEF35P-201ENST00000458709 GCKRQ14397 625 aa14.39□□□□□ -0.11
PRAMEF35P-201ENST00000458709 MTFR1Q15390 333 aa14.39□□□□□ -0.11
PRAMEF35P-201ENST00000458709 G2E3Q7L622 706 aa14.39□□□□□ -0.11
PRAMEF35P-201ENST00000458709 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.39□□□□□ -0.11
PRAMEF35P-201ENST00000458709 DPF3Q92784 378 aa14.39□□□□□ -0.11
PRAMEF35P-201ENST00000458709 TMEM39BQ9GZU3 492 aa14.39□□□□□ -0.11
PRAMEF35P-201ENST00000458709 TDRD3Q9H7E2 651 aaKnown RBP14.39□□□□□ -0.11
PRAMEF35P-201ENST00000458709 TLR2O60603 784 aa14.38□□□□□ -0.11
PRAMEF35P-201ENST00000458709 ANKRD18BA2A2Z9 1011 aa14.37□□□□□ -0.11
PRAMEF35P-201ENST00000458709 TCP10L2B9ZVM9 353 aa14.37□□□□□ -0.11
PRAMEF35P-201ENST00000458709 APAF1O14727 1248 aa14.37□□□□□ -0.11
PRAMEF35P-201ENST00000458709 MAP3K9P80192 1104 aa14.37□□□□□ -0.11
PRAMEF35P-201ENST00000458709 CALD1Q05682 793 aaKnown RBP14.37□□□□□ -0.11
PRAMEF35P-201ENST00000458709 KIF22Q14807 665 aa14.37□□□□□ -0.11
PRAMEF35P-201ENST00000458709 SLC17A8Q8NDX2 589 aa14.37□□□□□ -0.11
PRAMEF35P-201ENST00000458709 PRO3102Q9H379 93 aa14.37□□□□□ -0.11
PRAMEF35P-201ENST00000458709 CSADQ9Y600 493 aa14.37□□□□□ -0.11
PRAMEF35P-201ENST00000458709 ARAP2Q8WZ64 1704 aa14.37□□□□□ -0.11
PRAMEF35P-201ENST00000458709 SPDYE5A6NIY4 337 aa14.36□□□□□ -0.11
PRAMEF35P-201ENST00000458709 BTBD19C9JJ37 291 aa14.36□□□□□ -0.11
PRAMEF35P-201ENST00000458709 CTGFP29279 349 aa14.36□□□□□ -0.11
PRAMEF35P-201ENST00000458709 CCDC27Q2M243 656 aa14.36□□□□□ -0.11
PRAMEF35P-201ENST00000458709 MFSD14BQ5SR56 506 aa14.36□□□□□ -0.11
PRAMEF35P-201ENST00000458709 DZIP1LQ8IYY4 767 aaKnown RBP14.36□□□□□ -0.11
PRAMEF35P-201ENST00000458709 STK31Q9BXU1 1019 aa14.36□□□□□ -0.11
PRAMEF35P-201ENST00000458709 TTF2Q9UNY4 1162 aaKnown RBP14.36□□□□□ -0.11
PRAMEF35P-201ENST00000458709 SNCAIPQ9Y6H5 919 aa14.36□□□□□ -0.11
PRAMEF35P-201ENST00000458709 UBE2Q1Q7Z7E8 422 aa14.35□□□□□ -0.11
PRAMEF35P-201ENST00000458709 TSR2Q969E8 191 aaKnown RBP14.35□□□□□ -0.11
PRAMEF35P-201ENST00000458709 CHMP4AQ9BY43 222 aa14.35□□□□□ -0.11
PRAMEF35P-201ENST00000458709 SERPINA10Q9UK55 444 aa14.35□□□□□ -0.11
PRAMEF35P-201ENST00000458709 FAM205AQ6ZU69 1335 aa14.35□□□□□ -0.11
PRAMEF35P-201ENST00000458709 IRF6O14896 467 aa14.34□□□□□ -0.11
PRAMEF35P-201ENST00000458709 PLIN1O60240 522 aa14.34□□□□□ -0.11
PRAMEF35P-201ENST00000458709 WDHD1O75717 1129 aaPredicted RBP14.34□□□□□ -0.11
PRAMEF35P-201ENST00000458709 GNRH1P01148 92 aa14.34□□□□□ -0.11
PRAMEF35P-201ENST00000458709 CETPP11597 493 aa14.34□□□□□ -0.11
PRAMEF35P-201ENST00000458709 IFIT5Q13325 482 aaKnown RBP14.34□□□□□ -0.11
PRAMEF35P-201ENST00000458709 MYH16Q9H6N6 1097 aa14.34□□□□□ -0.11
PRAMEF35P-201ENST00000458709 ZCCHC17Q9NP64 241 aaKnown RBP14.34□□□□□ -0.11
PRAMEF35P-201ENST00000458709 SRRDQ9UH36 339 aa14.34□□□□□ -0.11
PRAMEF35P-201ENST00000458709 CHMP3Q9Y3E7 222 aa14.34□□□□□ -0.11
PRAMEF35P-201ENST00000458709 SOX1O00570 391 aaPredicted RBP14.33□□□□□ -0.12
PRAMEF35P-201ENST00000458709 CRKP46108 304 aa14.33□□□□□ -0.12
PRAMEF35P-201ENST00000458709 TNNI2P48788 182 aa14.33□□□□□ -0.12
PRAMEF35P-201ENST00000458709 CACNB3P54284 484 aa14.33□□□□□ -0.12
PRAMEF35P-201ENST00000458709 PRMT2P55345 433 aa14.33□□□□□ -0.12
PRAMEF35P-201ENST00000458709 FOXO4P98177 505 aa14.33□□□□□ -0.12
PRAMEF35P-201ENST00000458709 C17orf99Q6UX52 265 aa14.33□□□□□ -0.12
PRAMEF35P-201ENST00000458709 ERO1BQ86YB8 467 aa14.33□□□□□ -0.12
PRAMEF35P-201ENST00000458709 ZKSCAN4Q969J2 545 aaPredicted RBP14.33□□□□□ -0.12
PRAMEF35P-201ENST00000458709 ZNF594Q96JF6 807 aaPredicted RBP14.33□□□□□ -0.12
PRAMEF35P-201ENST00000458709 TRIM47Q96LD4 638 aa14.33□□□□□ -0.12
PRAMEF35P-201ENST00000458709 WRNIP1Q96S55 665 aa14.33□□□□□ -0.12
PRAMEF35P-201ENST00000458709 CPA4Q9UI42 421 aa14.33□□□□□ -0.12
PRAMEF35P-201ENST00000458709 COL6A3P12111 3177 aa14.32□□□□□ -0.12
PRAMEF35P-201ENST00000458709 OSBPP22059 807 aa14.32□□□□□ -0.12
PRAMEF35P-201ENST00000458709 GRK4P32298 578 aa14.32□□□□□ -0.12
PRAMEF35P-201ENST00000458709 PSMC4P43686 418 aa14.32□□□□□ -0.12
PRAMEF35P-201ENST00000458709 GYG1P46976 350 aa14.32□□□□□ -0.12
PRAMEF35P-201ENST00000458709 GJA8P48165 433 aa14.32□□□□□ -0.12
PRAMEF35P-201ENST00000458709 FLIIQ13045 1269 aa14.32□□□□□ -0.12
PRAMEF35P-201ENST00000458709 SNAPC2Q13487 334 aa14.32□□□□□ -0.12
PRAMEF35P-201ENST00000458709 GRIK5Q16478 980 aa14.32□□□□□ -0.12
PRAMEF35P-201ENST00000458709 LINS1Q8NG48 757 aa14.32□□□□□ -0.12
PRAMEF35P-201ENST00000458709 TDRD7Q8NHU6 1098 aaKnown RBP14.32□□□□□ -0.12
PRAMEF35P-201ENST00000458709 NKX2-3Q8TAU0 364 aa14.32□□□□□ -0.12
PRAMEF35P-201ENST00000458709 DNAAF4Q8WXU2 420 aa14.32□□□□□ -0.12
PRAMEF35P-201ENST00000458709 HTATIP2Q9BUP3 242 aa14.32□□□□□ -0.12
PRAMEF35P-201ENST00000458709 RIPOR2Q9Y4F9 1068 aa14.32□□□□□ -0.12
PRAMEF35P-201ENST00000458709 ZBTB7BO15156 539 aaPredicted RBP14.31□□□□□ -0.12
PRAMEF35P-201ENST00000458709 GJB1P08034 283 aa14.31□□□□□ -0.12
PRAMEF35P-201ENST00000458709 CCL5P13501 91 aa14.31□□□□□ -0.12
PRAMEF35P-201ENST00000458709 PPIL2Q13356 520 aa14.31□□□□□ -0.12
PRAMEF35P-201ENST00000458709 FKBP5Q13451 457 aaPredicted RBP14.31□□□□□ -0.12
PRAMEF35P-201ENST00000458709 RAET1EQ8TD07 263 aa14.31□□□□□ -0.12
PRAMEF35P-201ENST00000458709 LRCH3Q96II8 777 aa14.31□□□□□ -0.12
PRAMEF35P-201ENST00000458709 ADGRA2Q96PE1 1338 aa14.31□□□□□ -0.12
PRAMEF35P-201ENST00000458709 TWISTNBQ3B726 338 aaPredicted RBP14.3□□□□□ -0.12
PRAMEF35P-201ENST00000458709 EPHA10Q5JZY3 1008 aa14.3□□□□□ -0.12
PRAMEF35P-201ENST00000458709 LMBR1LQ6UX01 489 aa14.3□□□□□ -0.12
PRAMEF35P-201ENST00000458709 LDHAL6AQ6ZMR3 332 aa14.3□□□□□ -0.12
PRAMEF35P-201ENST00000458709 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.3□□□□□ -0.12
PRAMEF35P-201ENST00000458709 RNF208Q9H0X6 261 aa14.3□□□□□ -0.12
PRAMEF35P-201ENST00000458709 NR2E3Q9Y5X4 410 aa14.3□□□□□ -0.12
PRAMEF35P-201ENST00000458709 MYPNQ86TC9 1320 aa14.3□□□□□ -0.12
PRAMEF35P-201ENST00000458709 ZNF521Q96K83 1311 aa14.3□□□□□ -0.12
PRAMEF35P-201ENST00000458709 FARP2O94887 1054 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms