RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 NCOA7Q8NI08 942 aa16.44■□□□□ 0.22
SCFD1-203ENST00000458591 APPBP2Q92624 585 aa16.44■□□□□ 0.22
SCFD1-203ENST00000458591 ASAP1Q9ULH1 1129 aa16.44■□□□□ 0.22
SCFD1-203ENST00000458591 ATP1A3P13637 1013 aa16.44■□□□□ 0.22
SCFD1-203ENST00000458591 LMOD1P29536 600 aaPredicted RBP16.44■□□□□ 0.22
SCFD1-203ENST00000458591 GOLGA8FQ08AF8 430 aa16.44■□□□□ 0.22
SCFD1-203ENST00000458591 GOLGA8DPQ0D2H9 430 aa16.44■□□□□ 0.22
SCFD1-203ENST00000458591 ANO1Q5XXA6 986 aa16.44■□□□□ 0.22
SCFD1-203ENST00000458591 RALYLQ86SE5 291 aaKnown RBP16.44■□□□□ 0.22
SCFD1-203ENST00000458591 CCAR2Q8N163 923 aaKnown RBP16.44■□□□□ 0.22
SCFD1-203ENST00000458591 CLIC6Q96NY7 704 aa16.44■□□□□ 0.22
SCFD1-203ENST00000458591 GREM2Q9H772 168 aa16.44■□□□□ 0.22
SCFD1-203ENST00000458591 PIH1D3Q9NQM4 214 aaKnown RBP16.44■□□□□ 0.22
SCFD1-203ENST00000458591 CTNNA3Q9UI47 895 aa16.44■□□□□ 0.22
SCFD1-203ENST00000458591 PCDH11XQ9BZA7 1347 aa16.44■□□□□ 0.22
SCFD1-203ENST00000458591 PCDH11YQ9BZA8 1340 aa16.44■□□□□ 0.22
SCFD1-203ENST00000458591 APPP05067 770 aa16.43■□□□□ 0.22
SCFD1-203ENST00000458591 NCAPHQ15003 741 aa16.43■□□□□ 0.22
SCFD1-203ENST00000458591 METTL24Q5JXM2 366 aa16.43■□□□□ 0.22
SCFD1-203ENST00000458591 ATL3Q6DD88 541 aa16.43■□□□□ 0.22
SCFD1-203ENST00000458591 STK11IPQ8N1F8 1099 aa16.43■□□□□ 0.22
SCFD1-203ENST00000458591 LRRN4CLQ8ND94 238 aa16.43■□□□□ 0.22
SCFD1-203ENST00000458591 HELBQ8NG08 1087 aaPredicted RBP16.43■□□□□ 0.22
SCFD1-203ENST00000458591 TNS3Q68CZ2 1445 aa16.43■□□□□ 0.22
SCFD1-203ENST00000458591 KCPQ6ZWJ8 1503 aa16.43■□□□□ 0.22
SCFD1-203ENST00000458591 A0A1W2PQ27 194 aa16.43■□□□□ 0.22
SCFD1-203ENST00000458591 A0A1W2PQ64 194 aa16.43■□□□□ 0.22
SCFD1-203ENST00000458591 A0A1W2PQD8 194 aa16.43■□□□□ 0.22
SCFD1-203ENST00000458591 ABCC6O95255 1503 aa16.43■□□□□ 0.22
SCFD1-203ENST00000458591 SLC3A2P08195 630 aaKnown RBP16.43■□□□□ 0.22
SCFD1-203ENST00000458591 IFIT5Q13325 482 aaKnown RBP16.43■□□□□ 0.22
SCFD1-203ENST00000458591 SLC9C2Q5TAH2 1124 aa16.43■□□□□ 0.22
SCFD1-203ENST00000458591 SYNE3Q6ZMZ3 975 aa16.43■□□□□ 0.22
SCFD1-203ENST00000458591 GTPBP4Q9BZE4 634 aaKnown RBP16.43■□□□□ 0.22
SCFD1-203ENST00000458591 POLR3EQ9NVU0 708 aa16.43■□□□□ 0.22
SCFD1-203ENST00000458591 MYH15Q9Y2K3 1946 aa16.43■□□□□ 0.22
SCFD1-203ENST00000458591 PAXBP1Q9Y5B6 917 aa16.43■□□□□ 0.22
SCFD1-203ENST00000458591 ADAMTSL3P82987 1691 aa16.42■□□□□ 0.22
SCFD1-203ENST00000458591 B4E1Z4 1266 aa16.42■□□□□ 0.22
SCFD1-203ENST00000458591 ERVV-2B6SEH9 535 aa16.42■□□□□ 0.22
SCFD1-203ENST00000458591 IDH1O75874 414 aaKnown RBP16.42■□□□□ 0.22
SCFD1-203ENST00000458591 SPECC1Q5M775 1068 aa16.42■□□□□ 0.22
SCFD1-203ENST00000458591 E4F1Q66K89 784 aaPredicted RBP16.42■□□□□ 0.22
SCFD1-203ENST00000458591 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.42■□□□□ 0.22
SCFD1-203ENST00000458591 DPF2Q92785 391 aa16.42■□□□□ 0.22
SCFD1-203ENST00000458591 ATG3Q9NT62 314 aa16.42■□□□□ 0.22
SCFD1-203ENST00000458591 KIF1AQ12756 1690 aa16.42■□□□□ 0.22
SCFD1-203ENST00000458591 HSP90AA4PQ58FG1 418 aa16.42■□□□□ 0.22
SCFD1-203ENST00000458591 LDHAL6AQ6ZMR3 332 aa16.42■□□□□ 0.22
SCFD1-203ENST00000458591 MICU3Q86XE3 530 aa16.42■□□□□ 0.22
SCFD1-203ENST00000458591 KCNG4Q8TDN1 519 aa16.42■□□□□ 0.22
SCFD1-203ENST00000458591 ALG1Q9BT22 464 aa16.42■□□□□ 0.22
SCFD1-203ENST00000458591 WDR17Q8IZU2 1322 aa16.41■□□□□ 0.22
SCFD1-203ENST00000458591 ITGA6P23229 1130 aa16.41■□□□□ 0.22
SCFD1-203ENST00000458591 PNOCQ13519 176 aa16.41■□□□□ 0.22
SCFD1-203ENST00000458591 SYCP1Q15431 976 aa16.41■□□□□ 0.22
SCFD1-203ENST00000458591 FBXL16Q8N461 479 aa16.41■□□□□ 0.22
SCFD1-203ENST00000458591 NAT10Q9H0A0 1025 aaKnown RBP16.41■□□□□ 0.22
SCFD1-203ENST00000458591 WWC3Q9ULE0 1092 aa16.41■□□□□ 0.22
SCFD1-203ENST00000458591 AKAP2Q9Y2D5 859 aa16.41■□□□□ 0.22
SCFD1-203ENST00000458591 TACC3Q9Y6A5 838 aa16.41■□□□□ 0.22
SCFD1-203ENST00000458591 YEATS4O95619 227 aa16.41■□□□□ 0.22
SCFD1-203ENST00000458591 SHC4Q6S5L8 630 aa16.41■□□□□ 0.22
SCFD1-203ENST00000458591 HSD3B7Q9H2F3 369 aa16.41■□□□□ 0.22
SCFD1-203ENST00000458591 RIPOR2Q9Y4F9 1068 aa16.41■□□□□ 0.22
SCFD1-203ENST00000458591 NUP188Q5SRE5 1749 aa16.4■□□□□ 0.22
SCFD1-203ENST00000458591 PKD1L3Q7Z443 1732 aa16.4■□□□□ 0.22
SCFD1-203ENST00000458591 FOXN1O15353 648 aa16.4■□□□□ 0.22
SCFD1-203ENST00000458591 CSF1RP07333 972 aa16.4■□□□□ 0.22
SCFD1-203ENST00000458591 PHKA1P46020 1223 aa16.4■□□□□ 0.22
SCFD1-203ENST00000458591 NLRP12P59046 1061 aa16.4■□□□□ 0.22
SCFD1-203ENST00000458591 ZRSR1Q15695 479 aaKnown RBP16.4■□□□□ 0.22
SCFD1-203ENST00000458591 KRT40Q6A162 431 aa16.4■□□□□ 0.22
SCFD1-203ENST00000458591 ZFYP08048 801 aaPredicted RBP16.4■□□□□ 0.22
SCFD1-203ENST00000458591 ADD2P35612 726 aa16.4■□□□□ 0.22
SCFD1-203ENST00000458591 VPS37DQ86XT2 251 aa16.4■□□□□ 0.22
SCFD1-203ENST00000458591 RIC1Q4ADV7 1423 aa16.39■□□□□ 0.21
SCFD1-203ENST00000458591 ZNF532Q9HCE3 1301 aa16.39■□□□□ 0.21
SCFD1-203ENST00000458591 DHX16O60231 1041 aaKnown RBP16.39■□□□□ 0.21
SCFD1-203ENST00000458591 RANBP6O60518 1105 aaKnown RBP16.39■□□□□ 0.21
SCFD1-203ENST00000458591 PCCAP05165 728 aaPredicted RBP16.39■□□□□ 0.21
SCFD1-203ENST00000458591 IL2RBP14784 551 aa16.39■□□□□ 0.21
SCFD1-203ENST00000458591 METAP2P50579 478 aaKnown RBP eCLIP16.39■□□□□ 0.21
SCFD1-203ENST00000458591 CTDSPL2Q05D32 466 aa16.39■□□□□ 0.21
SCFD1-203ENST00000458591 ELF2Q15723 593 aa16.39■□□□□ 0.21
SCFD1-203ENST00000458591 TTLL11Q8NHH1 800 aa16.39■□□□□ 0.21
SCFD1-203ENST00000458591 CNNM1Q9NRU3 951 aa16.39■□□□□ 0.21
SCFD1-203ENST00000458591 LAMB4A4D0S4 1761 aa16.39■□□□□ 0.21
SCFD1-203ENST00000458591 SH2B2O14492 632 aaPredicted RBP16.38■□□□□ 0.21
SCFD1-203ENST00000458591 NEMFO60524 1076 aa16.38■□□□□ 0.21
SCFD1-203ENST00000458591 KMT5BQ4FZB7 885 aa16.38■□□□□ 0.21
SCFD1-203ENST00000458591 SYT10Q6XYQ8 523 aa16.38■□□□□ 0.21
SCFD1-203ENST00000458591 BRAPQ7Z569 592 aa16.38■□□□□ 0.21
SCFD1-203ENST00000458591 CMTR1Q8N1G2 835 aaKnown RBP16.38■□□□□ 0.21
SCFD1-203ENST00000458591 CCDC82Q8N4S0 544 aa16.38■□□□□ 0.21
SCFD1-203ENST00000458591 ZBTB38Q8NAP3 1195 aaPredicted RBP16.38■□□□□ 0.21
SCFD1-203ENST00000458591 FEZ1Q99689 392 aa16.38■□□□□ 0.21
SCFD1-203ENST00000458591 OSBPL5Q9H0X9 879 aaPredicted RBP16.38■□□□□ 0.21
SCFD1-203ENST00000458591 CMA1P23946 247 aa16.38■□□□□ 0.21
SCFD1-203ENST00000458591 FANCCQ00597 558 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms