RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 YEATS4O95619 227 aa12.76□□□□□ -0.37
RFX3-211ENST00000458034 FGAP02671 866 aa12.76□□□□□ -0.37
RFX3-211ENST00000458034 ITGA6P23229 1130 aa12.76□□□□□ -0.37
RFX3-211ENST00000458034 ADD2P35612 726 aa12.76□□□□□ -0.37
RFX3-211ENST00000458034 FOSBP53539 338 aa12.76□□□□□ -0.37
RFX3-211ENST00000458034 STK38Q15208 465 aa12.76□□□□□ -0.37
RFX3-211ENST00000458034 UBE3CQ15386 1083 aa12.76□□□□□ -0.37
RFX3-211ENST00000458034 SF3A1Q15459 793 aaKnown RBP12.76□□□□□ -0.37
RFX3-211ENST00000458034 SLFNL1Q499Z3 407 aa12.76□□□□□ -0.37
RFX3-211ENST00000458034 TTLL5Q6EMB2 1281 aa12.76□□□□□ -0.37
RFX3-211ENST00000458034 SARM1Q6SZW1 724 aa12.76□□□□□ -0.37
RFX3-211ENST00000458034 FSIP1Q8NA03 581 aa12.76□□□□□ -0.37
RFX3-211ENST00000458034 SPC24Q8NBT2 197 aa12.76□□□□□ -0.37
RFX3-211ENST00000458034 KIAA1524Q8TCG1 905 aa12.76□□□□□ -0.37
RFX3-211ENST00000458034 MRPS27Q92552 414 aaKnown RBP12.76□□□□□ -0.37
RFX3-211ENST00000458034 USP28Q96RU2 1077 aa12.76□□□□□ -0.37
RFX3-211ENST00000458034 DNAJC25Q9H1X3 360 aa12.76□□□□□ -0.37
RFX3-211ENST00000458034 LAMB2P55268 1798 aa12.76□□□□□ -0.37
RFX3-211ENST00000458034 BCL9O00512 1426 aa12.75□□□□□ -0.37
RFX3-211ENST00000458034 IRS4O14654 1257 aaPredicted RBP12.75□□□□□ -0.37
RFX3-211ENST00000458034 AP5Z1O43299 807 aa12.75□□□□□ -0.37
RFX3-211ENST00000458034 NEMFO60524 1076 aa12.75□□□□□ -0.37
RFX3-211ENST00000458034 ZMYM6O95789 1325 aa12.75□□□□□ -0.37
RFX3-211ENST00000458034 ME1P48163 572 aa12.75□□□□□ -0.37
RFX3-211ENST00000458034 CEBPZQ03701 1054 aaKnown RBP12.75□□□□□ -0.37
RFX3-211ENST00000458034 ZRSR1Q15695 479 aaKnown RBP12.75□□□□□ -0.37
RFX3-211ENST00000458034 ECM29Q5VYK3 1845 aa12.75□□□□□ -0.37
RFX3-211ENST00000458034 MROH5Q6ZUA9 1318 aa12.75□□□□□ -0.37
RFX3-211ENST00000458034 CEP57L1Q8IYX8 460 aa12.75□□□□□ -0.37
RFX3-211ENST00000458034 TTLL11Q8NHH1 800 aa12.75□□□□□ -0.37
RFX3-211ENST00000458034 NCOA5Q9HCD5 579 aaKnown RBP12.75□□□□□ -0.37
RFX3-211ENST00000458034 ORC3Q9UBD5 711 aaPredicted RBP12.75□□□□□ -0.37
RFX3-211ENST00000458034 ASAP1Q9ULH1 1129 aa12.75□□□□□ -0.37
RFX3-211ENST00000458034 DOT1LQ8TEK3 1739 aa12.74□□□□□ -0.37
RFX3-211ENST00000458034 BECN2A8MW95 431 aa12.74□□□□□ -0.37
RFX3-211ENST00000458034 SLC5A1P13866 664 aa12.74□□□□□ -0.37
RFX3-211ENST00000458034 ARID4AP29374 1257 aaPredicted RBP12.74□□□□□ -0.37
RFX3-211ENST00000458034 IL6STP40189 918 aaPredicted RBP12.74□□□□□ -0.37
RFX3-211ENST00000458034 HAND2P61296 217 aa12.74□□□□□ -0.37
RFX3-211ENST00000458034 TPM4P67936 248 aa12.74□□□□□ -0.37
RFX3-211ENST00000458034 DHX8Q14562 1220 aaKnown RBP12.74□□□□□ -0.37
RFX3-211ENST00000458034 PUM3Q15397 648 aaKnown RBP12.74□□□□□ -0.37
RFX3-211ENST00000458034 ADALQ6DHV7 355 aa12.74□□□□□ -0.37
RFX3-211ENST00000458034 SYNE3Q6ZMZ3 975 aa12.74□□□□□ -0.37
RFX3-211ENST00000458034 OTUD5Q96G74 571 aa12.74□□□□□ -0.37
RFX3-211ENST00000458034 TMEM87BQ96K49 555 aa12.74□□□□□ -0.37
RFX3-211ENST00000458034 TRMT112Q9UI30 125 aaKnown RBP12.74□□□□□ -0.37
RFX3-211ENST00000458034 MYO5AQ9Y4I1 1855 aaKnown RBP12.74□□□□□ -0.37
RFX3-211ENST00000458034 TIAM2Q8IVF5 1701 aa12.74□□□□□ -0.37
RFX3-211ENST00000458034 COL22A1Q8NFW1 1626 aaPredicted RBP12.73□□□□□ -0.37
RFX3-211ENST00000458034 GALR2O43603 387 aaPredicted RBP12.73□□□□□ -0.37
RFX3-211ENST00000458034 PDE8BO95263 885 aa12.73□□□□□ -0.37
RFX3-211ENST00000458034 CYP19A1P11511 503 aaPredicted RBP12.73□□□□□ -0.37
RFX3-211ENST00000458034 GPTP24298 496 aa12.73□□□□□ -0.37
RFX3-211ENST00000458034 MCAMP43121 646 aa12.73□□□□□ -0.37
RFX3-211ENST00000458034 GUCY1B3Q02153 619 aa12.73□□□□□ -0.37
RFX3-211ENST00000458034 SCARF1Q14162 830 aa12.73□□□□□ -0.37
RFX3-211ENST00000458034 ALX1Q15699 326 aa12.73□□□□□ -0.37
RFX3-211ENST00000458034 CHST3Q7LGC8 479 aa12.73□□□□□ -0.37
RFX3-211ENST00000458034 MPNDQ8N594 471 aa12.73□□□□□ -0.37
RFX3-211ENST00000458034 ENGASEQ8NFI3 743 aa12.73□□□□□ -0.37
RFX3-211ENST00000458034 FBXO18Q8NFZ0 1043 aa12.73□□□□□ -0.37
RFX3-211ENST00000458034 LPIN2Q92539 896 aa12.73□□□□□ -0.37
RFX3-211ENST00000458034 MRFAP1L1Q96HT8 127 aa12.73□□□□□ -0.37
RFX3-211ENST00000458034 CCDC85AQ96PX6 553 aaPredicted RBP12.73□□□□□ -0.37
RFX3-211ENST00000458034 PUS7LQ9H0K6 701 aaKnown RBP12.73□□□□□ -0.37
RFX3-211ENST00000458034 KCNF1Q9H3M0 494 aa12.73□□□□□ -0.37
RFX3-211ENST00000458034 GREM2Q9H772 168 aa12.73□□□□□ -0.37
RFX3-211ENST00000458034 POLR3EQ9NVU0 708 aa12.73□□□□□ -0.37
RFX3-211ENST00000458034 ANGEL1Q9UNK9 670 aaKnown RBP12.73□□□□□ -0.37
RFX3-211ENST00000458034 PHLPP1O60346 1717 aa12.73□□□□□ -0.37
RFX3-211ENST00000458034 KAT6BQ8WYB5 2073 aa12.73□□□□□ -0.37
RFX3-211ENST00000458034 A0A0G2JLW4 131 aa12.72□□□□□ -0.37
RFX3-211ENST00000458034 FDPSP14324 419 aaKnown RBP12.72□□□□□ -0.37
RFX3-211ENST00000458034 PTGS1P23219 599 aa12.72□□□□□ -0.37
RFX3-211ENST00000458034 GTF2F1P35269 517 aaKnown RBP eCLIP12.72□□□□□ -0.37
RFX3-211ENST00000458034 IQCB1Q15051 598 aa12.72□□□□□ -0.37
RFX3-211ENST00000458034 HLFQ16534 295 aa12.72□□□□□ -0.37
RFX3-211ENST00000458034 SLC9C2Q5TAH2 1124 aa12.72□□□□□ -0.37
RFX3-211ENST00000458034 CCDC186Q7Z3E2 898 aa12.72□□□□□ -0.37
RFX3-211ENST00000458034 VGLL2Q8N8G2 317 aa12.72□□□□□ -0.37
RFX3-211ENST00000458034 JMYQ8N9B5 988 aa12.72□□□□□ -0.37
RFX3-211ENST00000458034 UBE2Q2Q8WVN8 375 aa12.72□□□□□ -0.37
RFX3-211ENST00000458034 GOLPH3LQ9H4A5 285 aa12.72□□□□□ -0.37
RFX3-211ENST00000458034 BTG4Q9NY30 223 aa12.72□□□□□ -0.37
RFX3-211ENST00000458034 CLIP2Q9UDT6 1046 aa12.72□□□□□ -0.37
RFX3-211ENST00000458034 PYCARDQ9ULZ3 195 aa12.72□□□□□ -0.37
RFX3-211ENST00000458034 RREB1Q92766 1687 aa12.72□□□□□ -0.37
RFX3-211ENST00000458034 CICQ96RK0 1608 aaPredicted RBP12.72□□□□□ -0.37
RFX3-211ENST00000458034 EXOC5O00471 708 aa12.71□□□□□ -0.37
RFX3-211ENST00000458034 SH2B2O14492 632 aaPredicted RBP12.71□□□□□ -0.37
RFX3-211ENST00000458034 SPTLC2O15270 562 aa12.71□□□□□ -0.37
RFX3-211ENST00000458034 FOXP2O15409 715 aa12.71□□□□□ -0.37
RFX3-211ENST00000458034 IDH1O75874 414 aaKnown RBP12.71□□□□□ -0.37
RFX3-211ENST00000458034 APPP05067 770 aa12.71□□□□□ -0.37
RFX3-211ENST00000458034 METAP2P50579 478 aaKnown RBP eCLIP12.71□□□□□ -0.37
RFX3-211ENST00000458034 ANTXR2P58335 489 aa12.71□□□□□ -0.37
RFX3-211ENST00000458034 MAP3K12Q12852 859 aa12.71□□□□□ -0.37
RFX3-211ENST00000458034 SNW1Q13573 536 aaKnown RBP12.71□□□□□ -0.37
RFX3-211ENST00000458034 TRIM29Q14134 588 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms