RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 DSCC1Q9BVC3 393 aa10.7□□□□□ -0.7
CDC42EP3-204ENST00000457889 DAXXQ9UER7 740 aaPredicted RBP10.7□□□□□ -0.7
CDC42EP3-204ENST00000457889 NSFL1CQ9UNZ2 370 aaKnown RBP10.7□□□□□ -0.7
CDC42EP3-204ENST00000457889 SNAP23O00161 211 aa10.69□□□□□ -0.7
CDC42EP3-204ENST00000457889 FRAT2O75474 233 aaPredicted RBP10.69□□□□□ -0.7
CDC42EP3-204ENST00000457889 PDE6AP16499 860 aa10.69□□□□□ -0.7
CDC42EP3-204ENST00000457889 ZKSCAN1P17029 563 aaPredicted RBP10.69□□□□□ -0.7
CDC42EP3-204ENST00000457889 TGFB2P61812 414 aa10.69□□□□□ -0.7
CDC42EP3-204ENST00000457889 SLC9C2Q5TAH2 1124 aa10.69□□□□□ -0.7
CDC42EP3-204ENST00000457889 SOGA3Q5TF21 947 aa10.69□□□□□ -0.7
CDC42EP3-204ENST00000457889 PRPF40BQ6NWY9 871 aaKnown RBP10.69□□□□□ -0.7
CDC42EP3-204ENST00000457889 PI16Q6UXB8 463 aa10.69□□□□□ -0.7
CDC42EP3-204ENST00000457889 CERS3Q8IU89 383 aa10.69□□□□□ -0.7
CDC42EP3-204ENST00000457889 MPNDQ8N594 471 aa10.69□□□□□ -0.7
CDC42EP3-204ENST00000457889 TBC1D16Q8TBP0 767 aa10.69□□□□□ -0.7
CDC42EP3-204ENST00000457889 KCNB2Q92953 911 aa10.69□□□□□ -0.7
CDC42EP3-204ENST00000457889 ZNF622Q969S3 477 aaKnown RBP eCLIP10.69□□□□□ -0.7
CDC42EP3-204ENST00000457889 SNX21Q969T3 373 aa10.69□□□□□ -0.7
CDC42EP3-204ENST00000457889 MARVELD3Q96A59 401 aa10.69□□□□□ -0.7
CDC42EP3-204ENST00000457889 ANTXR1Q9H6X2 564 aa10.69□□□□□ -0.7
CDC42EP3-204ENST00000457889 MYH13Q9UKX3 1938 aa10.68□□□□□ -0.7
CDC42EP3-204ENST00000457889 RPAP1Q9BWH6 1393 aaPredicted RBP10.68□□□□□ -0.7
CDC42EP3-204ENST00000457889 MAST3O60307 1309 aa10.68□□□□□ -0.7
CDC42EP3-204ENST00000457889 ZMYM6O95789 1325 aa10.68□□□□□ -0.7
CDC42EP3-204ENST00000457889 IDH1O75874 414 aaKnown RBP10.68□□□□□ -0.7
CDC42EP3-204ENST00000457889 IL1R1P14778 569 aa10.68□□□□□ -0.7
CDC42EP3-204ENST00000457889 GNAT2P19087 354 aa10.68□□□□□ -0.7
CDC42EP3-204ENST00000457889 MCM2P49736 904 aa10.68□□□□□ -0.7
CDC42EP3-204ENST00000457889 KRT32Q14532 448 aa10.68□□□□□ -0.7
CDC42EP3-204ENST00000457889 DPP8Q6V1X1 898 aaPredicted RBP10.68□□□□□ -0.7
CDC42EP3-204ENST00000457889 SUPT20HQ8NEM7 779 aa10.68□□□□□ -0.7
CDC42EP3-204ENST00000457889 TDRD7Q8NHU6 1098 aaKnown RBP10.68□□□□□ -0.7
CDC42EP3-204ENST00000457889 TBC1D22AQ8WUA7 517 aa10.68□□□□□ -0.7
CDC42EP3-204ENST00000457889 KIF2CQ99661 725 aa10.68□□□□□ -0.7
CDC42EP3-204ENST00000457889 RTFDC1Q9BY42 306 aaPredicted RBP10.68□□□□□ -0.7
CDC42EP3-204ENST00000457889 COA1Q9GZY4 146 aa10.68□□□□□ -0.7
CDC42EP3-204ENST00000457889 IL25Q9H293 177 aa10.68□□□□□ -0.7
CDC42EP3-204ENST00000457889 PIH1D3Q9NQM4 214 aaKnown RBP10.68□□□□□ -0.7
CDC42EP3-204ENST00000457889 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.68□□□□□ -0.7
CDC42EP3-204ENST00000457889 LRP2BPQ9P2M1 347 aa10.68□□□□□ -0.7
CDC42EP3-204ENST00000457889 CTNNA3Q9UI47 895 aa10.68□□□□□ -0.7
CDC42EP3-204ENST00000457889 NDUFB9Q9Y6M9 179 aa10.68□□□□□ -0.7
CDC42EP3-204ENST00000457889 COL1A1P02452 1464 aaPredicted RBP10.68□□□□□ -0.7
CDC42EP3-204ENST00000457889 MAST2Q6P0Q8 1798 aa10.67□□□□□ -0.7
CDC42EP3-204ENST00000457889 C6orf229H3BNL8 230 aa10.67□□□□□ -0.7
CDC42EP3-204ENST00000457889 TSGA10IPQ3SY00 556 aa10.67□□□□□ -0.7
CDC42EP3-204ENST00000457889 TTLL6Q8N841 843 aa10.67□□□□□ -0.7
CDC42EP3-204ENST00000457889 TM6SF1Q9BZW5 370 aa10.67□□□□□ -0.7
CDC42EP3-204ENST00000457889 VPS33BQ9H267 617 aa10.67□□□□□ -0.7
CDC42EP3-204ENST00000457889 SUGT1Q9Y2Z0 365 aa10.67□□□□□ -0.7
CDC42EP3-204ENST00000457889 CD2APQ9Y5K6 639 aa10.67□□□□□ -0.7
CDC42EP3-204ENST00000457889 FAM205AQ6ZU69 1335 aa10.66□□□□□ -0.7
CDC42EP3-204ENST00000457889 TCRBV5S4A2TA0A5A2 114 aa10.66□□□□□ -0.7
CDC42EP3-204ENST00000457889 KLRK1P26718 216 aa10.66□□□□□ -0.7
CDC42EP3-204ENST00000457889 PSMA5P28066 241 aa10.66□□□□□ -0.7
CDC42EP3-204ENST00000457889 GSTO1P78417 241 aa10.66□□□□□ -0.7
CDC42EP3-204ENST00000457889 GSE1Q14687 1217 aa10.66□□□□□ -0.7
CDC42EP3-204ENST00000457889 NECTIN1Q15223 517 aa10.66□□□□□ -0.7
CDC42EP3-204ENST00000457889 ERICH6Q7L0X2 663 aa10.66□□□□□ -0.7
CDC42EP3-204ENST00000457889 ZNF589Q86UQ0 364 aaPredicted RBP10.66□□□□□ -0.7
CDC42EP3-204ENST00000457889 HSCBQ8IWL3 235 aa10.66□□□□□ -0.7
CDC42EP3-204ENST00000457889 RTKN2Q8IZC4 609 aa10.66□□□□□ -0.7
CDC42EP3-204ENST00000457889 C7orf43Q8WVR3 580 aa10.66□□□□□ -0.7
CDC42EP3-204ENST00000457889 OSBP2Q969R2 916 aa10.66□□□□□ -0.7
CDC42EP3-204ENST00000457889 ZC3H12CQ9C0D7 883 aaKnown RBP10.66□□□□□ -0.7
CDC42EP3-204ENST00000457889 PDGFDQ9GZP0 370 aaPredicted RBP10.66□□□□□ -0.7
CDC42EP3-204ENST00000457889 CD209Q9NNX6 404 aa10.66□□□□□ -0.7
CDC42EP3-204ENST00000457889 POLLQ9UGP5 575 aa10.66□□□□□ -0.7
CDC42EP3-204ENST00000457889 RBM8AQ9Y5S9 174 aaKnown RBP10.66□□□□□ -0.7
CDC42EP3-204ENST00000457889 SNED1Q8TER0 1413 aa10.66□□□□□ -0.7
CDC42EP3-204ENST00000457889 ZNF532Q9HCE3 1301 aa10.65□□□□□ -0.7
CDC42EP3-204ENST00000457889 GPAA1O43292 621 aa10.65□□□□□ -0.7
CDC42EP3-204ENST00000457889 PTH1RQ03431 593 aa10.65□□□□□ -0.7
CDC42EP3-204ENST00000457889 R3HDM1Q15032 1099 aaKnown RBP10.65□□□□□ -0.7
CDC42EP3-204ENST00000457889 CCDC93Q567U6 631 aa10.65□□□□□ -0.7
CDC42EP3-204ENST00000457889 SLF2Q8IX21 1173 aa10.65□□□□□ -0.7
CDC42EP3-204ENST00000457889 MAGEB6Q8N7X4 407 aa10.65□□□□□ -0.7
CDC42EP3-204ENST00000457889 AIDAQ96BJ3 306 aa10.65□□□□□ -0.7
CDC42EP3-204ENST00000457889 PSMD1Q99460 953 aa10.65□□□□□ -0.7
CDC42EP3-204ENST00000457889 RAI14Q9P0K7 980 aa10.65□□□□□ -0.7
CDC42EP3-204ENST00000457889 KIAA1551Q9HCM1 1747 aa10.64□□□□□ -0.71
CDC42EP3-204ENST00000457889 SLX4Q8IY92 1834 aa10.64□□□□□ -0.71
CDC42EP3-204ENST00000457889 M0R2C6 588 aa10.64□□□□□ -0.71
CDC42EP3-204ENST00000457889 ZBTB7AO95365 584 aa10.64□□□□□ -0.71
CDC42EP3-204ENST00000457889 HMGB1P09429 215 aaKnown RBP10.64□□□□□ -0.71
CDC42EP3-204ENST00000457889 HSPD1P10809 573 aaKnown RBP10.64□□□□□ -0.71
CDC42EP3-204ENST00000457889 CHRNA5P30532 468 aa10.64□□□□□ -0.71
CDC42EP3-204ENST00000457889 PSEN1P49768 467 aa10.64□□□□□ -0.71
CDC42EP3-204ENST00000457889 FKBP1AP62942 108 aaKnown RBP10.64□□□□□ -0.71
CDC42EP3-204ENST00000457889 ALX1Q15699 326 aa10.64□□□□□ -0.71
CDC42EP3-204ENST00000457889 CREB3L3Q68CJ9 461 aa10.64□□□□□ -0.71
CDC42EP3-204ENST00000457889 NAA16Q6N069 864 aaPredicted RBP10.64□□□□□ -0.71
CDC42EP3-204ENST00000457889 PODNQ7Z5L7 613 aa10.64□□□□□ -0.71
CDC42EP3-204ENST00000457889 ZNF467Q7Z7K2 595 aaPredicted RBP10.64□□□□□ -0.71
CDC42EP3-204ENST00000457889 TXNRD3Q86VQ6 643 aa10.64□□□□□ -0.71
CDC42EP3-204ENST00000457889 NACAP1Q9BZK3 213 aa10.64□□□□□ -0.71
CDC42EP3-204ENST00000457889 ABCF2Q9UG63 623 aa10.64□□□□□ -0.71
CDC42EP3-204ENST00000457889 WWC3Q9ULE0 1092 aa10.64□□□□□ -0.71
CDC42EP3-204ENST00000457889 SLC27A2O14975 620 aa10.63□□□□□ -0.71
CDC42EP3-204ENST00000457889 LDHBP07195 334 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms