RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 LRRC24Q50LG9 513 aa11.02□□□□□ -0.65
PKP4-207ENST00000457109 SSH1Q8WYL5 1049 aa11.02□□□□□ -0.65
PKP4-207ENST00000457109 ERO1AQ96HE7 468 aa11.02□□□□□ -0.65
PKP4-207ENST00000457109 CLMNQ96JQ2 1002 aa11.02□□□□□ -0.65
PKP4-207ENST00000457109 CFHR5Q9BXR6 569 aa11.02□□□□□ -0.65
PKP4-207ENST00000457109 SUGT1Q9Y2Z0 365 aa11.02□□□□□ -0.65
PKP4-207ENST00000457109 UBTFL1P0CB47 393 aaPredicted RBP11.01□□□□□ -0.65
PKP4-207ENST00000457109 SLFN5Q08AF3 891 aa11.01□□□□□ -0.65
PKP4-207ENST00000457109 WDR66Q8TBY9 1149 aa11.01□□□□□ -0.65
PKP4-207ENST00000457109 KAZALD1Q96I82 304 aa11.01□□□□□ -0.65
PKP4-207ENST00000457109 MRIQ9BWK5 157 aa11.01□□□□□ -0.65
PKP4-207ENST00000457109 USP44Q9H0E7 712 aa11.01□□□□□ -0.65
PKP4-207ENST00000457109 ELP3Q9H9T3 547 aa11.01□□□□□ -0.65
PKP4-207ENST00000457109 CEP126Q9P2H0 1117 aa11.01□□□□□ -0.65
PKP4-207ENST00000457109 TRIM17Q9Y577 477 aa11.01□□□□□ -0.65
PKP4-207ENST00000457109 POLR2AP24928 1970 aaKnown RBP11□□□□□ -0.65
PKP4-207ENST00000457109 EYA2O00167 538 aa11□□□□□ -0.65
PKP4-207ENST00000457109 CT47B1P0C2W7 299 aaPredicted RBP11□□□□□ -0.65
PKP4-207ENST00000457109 BCAMP50895 628 aa11□□□□□ -0.65
PKP4-207ENST00000457109 GTF2A2P52657 109 aa11□□□□□ -0.65
PKP4-207ENST00000457109 DCAF15Q66K64 600 aa11□□□□□ -0.65
PKP4-207ENST00000457109 INTS3Q68E01 1043 aaKnown RBP11□□□□□ -0.65
PKP4-207ENST00000457109 LPIN2Q92539 896 aa11□□□□□ -0.65
PKP4-207ENST00000457109 OPTNQ96CV9 577 aa11□□□□□ -0.65
PKP4-207ENST00000457109 API5Q9BZZ5 524 aaKnown RBP11□□□□□ -0.65
PKP4-207ENST00000457109 ZNF521Q96K83 1311 aa11□□□□□ -0.65
PKP4-207ENST00000457109 CASP8AP2Q9UKL3 1982 aa10.99□□□□□ -0.65
PKP4-207ENST00000457109 SP3Q02447 781 aa10.99□□□□□ -0.65
PKP4-207ENST00000457109 ANKRD44Q8N8A2 993 aa10.99□□□□□ -0.65
PKP4-207ENST00000457109 KLHDC4Q8TBB5 520 aa10.99□□□□□ -0.65
PKP4-207ENST00000457109 TMEM39BQ9GZU3 492 aa10.99□□□□□ -0.65
PKP4-207ENST00000457109 ZFYVE28Q9HCC9 887 aa10.99□□□□□ -0.65
PKP4-207ENST00000457109 FBXO3Q9UK99 471 aa10.99□□□□□ -0.65
PKP4-207ENST00000457109 MYH3P11055 1940 aa10.98□□□□□ -0.65
PKP4-207ENST00000457109 CCL15-CCL14A0A0B4J2E2 113 aa10.98□□□□□ -0.65
PKP4-207ENST00000457109 KIF22Q14807 665 aa10.98□□□□□ -0.65
PKP4-207ENST00000457109 CCL15Q16663 113 aa10.98□□□□□ -0.65
PKP4-207ENST00000457109 HHIPL2Q6UWX4 724 aa10.98□□□□□ -0.65
PKP4-207ENST00000457109 FAM83AQ86UY5 434 aa10.98□□□□□ -0.65
PKP4-207ENST00000457109 ZDHHC15Q96MV8 337 aa10.98□□□□□ -0.65
PKP4-207ENST00000457109 EFCC1Q9HA90 598 aa10.98□□□□□ -0.65
PKP4-207ENST00000457109 NOB1Q9ULX3 412 aaKnown RBP10.98□□□□□ -0.65
PKP4-207ENST00000457109 IGF2BP3O00425 579 aaKnown RBP eCLIP10.97□□□□□ -0.65
PKP4-207ENST00000457109 LDHBP07195 334 aaKnown RBP10.97□□□□□ -0.65
PKP4-207ENST00000457109 CETPP11597 493 aa10.97□□□□□ -0.65
PKP4-207ENST00000457109 CRHR2Q13324 411 aa10.97□□□□□ -0.65
PKP4-207ENST00000457109 TAF1CQ15572 869 aaPredicted RBP10.97□□□□□ -0.65
PKP4-207ENST00000457109 ATP2B3Q16720 1220 aa10.97□□□□□ -0.65
PKP4-207ENST00000457109 FKBP1CQ5VVH2 108 aa10.97□□□□□ -0.65
PKP4-207ENST00000457109 NBPF11Q86T75 865 aa10.97□□□□□ -0.65
PKP4-207ENST00000457109 OTUD5Q96G74 571 aa10.97□□□□□ -0.65
PKP4-207ENST00000457109 SIL1Q9H173 461 aa10.97□□□□□ -0.65
PKP4-207ENST00000457109 R3HDMLQ9H3Y0 253 aa10.97□□□□□ -0.65
PKP4-207ENST00000457109 KIF16BQ96L93 1317 aa10.97□□□□□ -0.65
PKP4-207ENST00000457109 AOX1Q06278 1338 aa10.96□□□□□ -0.65
PKP4-207ENST00000457109 TESPA1A2RU30 521 aaPredicted RBP10.96□□□□□ -0.65
PKP4-207ENST00000457109 IPO8O15397 1037 aaKnown RBP10.96□□□□□ -0.65
PKP4-207ENST00000457109 CIAO1O76071 339 aa10.96□□□□□ -0.65
PKP4-207ENST00000457109 FGFR2P21802 821 aa10.96□□□□□ -0.65
PKP4-207ENST00000457109 IL15P40933 162 aaPredicted RBP10.96□□□□□ -0.65
PKP4-207ENST00000457109 CACNB3P54284 484 aa10.96□□□□□ -0.65
PKP4-207ENST00000457109 SNAPC2Q13487 334 aa10.96□□□□□ -0.65
PKP4-207ENST00000457109 VGLL4Q14135 290 aa10.96□□□□□ -0.65
PKP4-207ENST00000457109 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.96□□□□□ -0.65
PKP4-207ENST00000457109 OTOP1Q7RTM1 612 aa10.96□□□□□ -0.65
PKP4-207ENST00000457109 ERO1BQ86YB8 467 aa10.96□□□□□ -0.65
PKP4-207ENST00000457109 SLF2Q8IX21 1173 aa10.96□□□□□ -0.65
PKP4-207ENST00000457109 ZGPATQ8N5A5 531 aaKnown RBP10.96□□□□□ -0.65
PKP4-207ENST00000457109 VGLL2Q8N8G2 317 aa10.96□□□□□ -0.65
PKP4-207ENST00000457109 CD99L2Q8TCZ2 262 aa10.96□□□□□ -0.65
PKP4-207ENST00000457109 CDCA7LQ96GN5 454 aa10.96□□□□□ -0.65
PKP4-207ENST00000457109 TEPSINQ96N21 525 aa10.96□□□□□ -0.65
PKP4-207ENST00000457109 WRNIP1Q96S55 665 aa10.96□□□□□ -0.65
PKP4-207ENST00000457109 TMEM106CQ9BVX2 250 aa10.96□□□□□ -0.65
PKP4-207ENST00000457109 ZNF341Q9BYN7 854 aa10.96□□□□□ -0.65
PKP4-207ENST00000457109 DENND2AQ9ULE3 1009 aa10.96□□□□□ -0.65
PKP4-207ENST00000457109 SEMA3EO15041 775 aa10.95□□□□□ -0.66
PKP4-207ENST00000457109 GNAI3P08754 354 aa10.95□□□□□ -0.66
PKP4-207ENST00000457109 GJA5P36382 358 aa10.95□□□□□ -0.66
PKP4-207ENST00000457109 GRIK5Q16478 980 aa10.95□□□□□ -0.66
PKP4-207ENST00000457109 GORABQ5T7V8 394 aa10.95□□□□□ -0.66
PKP4-207ENST00000457109 SPTY2D1Q68D10 685 aaPredicted RBP10.95□□□□□ -0.66
PKP4-207ENST00000457109 APOBEC3HQ6NTF7 200 aaKnown RBP10.95□□□□□ -0.66
PKP4-207ENST00000457109 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.95□□□□□ -0.66
PKP4-207ENST00000457109 FAM151AQ8WW52 585 aa10.95□□□□□ -0.66
PKP4-207ENST00000457109 USP40Q9NVE5 1235 aa10.95□□□□□ -0.66
PKP4-207ENST00000457109 AKAP2Q9Y2D5 859 aa10.95□□□□□ -0.66
PKP4-207ENST00000457109 PTPN22Q9Y2R2 807 aa10.95□□□□□ -0.66
PKP4-207ENST00000457109 AKAP11Q9UKA4 1901 aa10.95□□□□□ -0.66
PKP4-207ENST00000457109 PSME4Q14997 1843 aa10.95□□□□□ -0.66
PKP4-207ENST00000457109 SPEF2Q9C093 1822 aa10.95□□□□□ -0.66
PKP4-207ENST00000457109 CACNA1FO60840 1977 aa10.94□□□□□ -0.66
PKP4-207ENST00000457109 SPDYE5A6NIY4 337 aa10.94□□□□□ -0.66
PKP4-207ENST00000457109 TCP10Q12799 353 aa10.94□□□□□ -0.66
PKP4-207ENST00000457109 MIGA2Q7L4E1 593 aa10.94□□□□□ -0.66
PKP4-207ENST00000457109 ZSCAN29Q8IWY8 852 aaPredicted RBP10.94□□□□□ -0.66
PKP4-207ENST00000457109 BRI3BPQ8WY22 251 aa10.94□□□□□ -0.66
PKP4-207ENST00000457109 MS4A4AQ96JQ5 239 aa10.94□□□□□ -0.66
PKP4-207ENST00000457109 PTPN18Q99952 460 aa10.94□□□□□ -0.66
PKP4-207ENST00000457109 LRRFIP2Q9Y608 721 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms