RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 GOLIM4O00461 696 aa17.17■□□□□ 0.34
TIMP1-205ENST00000456754 VEGFAP15692 232 aaPredicted RBP17.17■□□□□ 0.34
TIMP1-205ENST00000456754 SLFNL1Q499Z3 407 aa17.17■□□□□ 0.34
TIMP1-205ENST00000456754 PLEKHM2Q8IWE5 1019 aa17.17■□□□□ 0.34
TIMP1-205ENST00000456754 TBC1D22AQ8WUA7 517 aa17.17■□□□□ 0.34
TIMP1-205ENST00000456754 ZBTB47Q9UFB7 747 aaPredicted RBP17.17■□□□□ 0.34
TIMP1-205ENST00000456754 SCAF8Q9UPN6 1271 aaKnown RBP17.17■□□□□ 0.34
TIMP1-205ENST00000456754 MYO3BQ8WXR4 1341 aa17.17■□□□□ 0.34
TIMP1-205ENST00000456754 POLR2AP24928 1970 aaKnown RBP17.17■□□□□ 0.34
TIMP1-205ENST00000456754 H7C1D1 291 aa17.16■□□□□ 0.34
TIMP1-205ENST00000456754 ZBTB22O15209 634 aa17.16■□□□□ 0.34
TIMP1-205ENST00000456754 PDE1AP54750 535 aa17.16■□□□□ 0.34
TIMP1-205ENST00000456754 KIF4BQ2VIQ3 1234 aa17.16■□□□□ 0.34
TIMP1-205ENST00000456754 NBPF9Q3BBW0 867 aa17.16■□□□□ 0.34
TIMP1-205ENST00000456754 CENPQQ7L2Z9 268 aaPredicted RBP17.16■□□□□ 0.34
TIMP1-205ENST00000456754 MYOZ2Q9NPC6 264 aa17.16■□□□□ 0.34
TIMP1-205ENST00000456754 LDHBP07195 334 aaKnown RBP17.15■□□□□ 0.34
TIMP1-205ENST00000456754 CFAP100Q494V2 611 aa17.15■□□□□ 0.34
TIMP1-205ENST00000456754 DLK2Q6UY11 383 aa17.15■□□□□ 0.34
TIMP1-205ENST00000456754 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.15■□□□□ 0.34
TIMP1-205ENST00000456754 HAUS7Q99871 368 aa17.15■□□□□ 0.34
TIMP1-205ENST00000456754 ADARB2Q9NS39 739 aaKnown RBP17.15■□□□□ 0.34
TIMP1-205ENST00000456754 MAST2Q6P0Q8 1798 aa17.15■□□□□ 0.34
TIMP1-205ENST00000456754 IQCA1LA6NCM1 817 aa17.14■□□□□ 0.33
TIMP1-205ENST00000456754 CRKP46108 304 aa17.14■□□□□ 0.33
TIMP1-205ENST00000456754 MECOMQ03112 1051 aa17.14■□□□□ 0.33
TIMP1-205ENST00000456754 ZBED3Q96IU2 234 aaPredicted RBP17.14■□□□□ 0.33
TIMP1-205ENST00000456754 PRMT6Q96LA8 375 aaPredicted RBP17.14■□□□□ 0.33
TIMP1-205ENST00000456754 RAI14Q9P0K7 980 aa17.14■□□□□ 0.33
TIMP1-205ENST00000456754 LRP2BPQ9P2M1 347 aa17.14■□□□□ 0.33
TIMP1-205ENST00000456754 STAP2Q9UGK3 403 aa17.14■□□□□ 0.33
TIMP1-205ENST00000456754 IDH1O75874 414 aaKnown RBP17.13■□□□□ 0.33
TIMP1-205ENST00000456754 RBM5P52756 815 aaKnown RBP eCLIP17.13■□□□□ 0.33
TIMP1-205ENST00000456754 ERICH6BQ5W0A0 696 aa17.13■□□□□ 0.33
TIMP1-205ENST00000456754 ERICH6Q7L0X2 663 aa17.13■□□□□ 0.33
TIMP1-205ENST00000456754 ADGRA1Q86SQ6 560 aa17.13■□□□□ 0.33
TIMP1-205ENST00000456754 NSUN4Q96CB9 384 aaKnown RBP17.13■□□□□ 0.33
TIMP1-205ENST00000456754 PAG1Q9NWQ8 432 aa17.13■□□□□ 0.33
TIMP1-205ENST00000456754 TTC41PQ6P2S7 1318 aa17.13■□□□□ 0.33
TIMP1-205ENST00000456754 MYH7P12883 1935 aa17.13■□□□□ 0.33
TIMP1-205ENST00000456754 WNT10BO00744 389 aa17.12■□□□□ 0.33
TIMP1-205ENST00000456754 DZIP1Q86YF9 867 aaKnown RBP17.12■□□□□ 0.33
TIMP1-205ENST00000456754 OGFOD1Q8N543 542 aa17.12■□□□□ 0.33
TIMP1-205ENST00000456754 GPATCH3Q96I76 525 aa17.12■□□□□ 0.33
TIMP1-205ENST00000456754 DAGLAQ9Y4D2 1042 aa17.12■□□□□ 0.33
TIMP1-205ENST00000456754 ECM29Q5VYK3 1845 aa17.12■□□□□ 0.33
TIMP1-205ENST00000456754 CLRN2A0PK11 232 aa17.11■□□□□ 0.33
TIMP1-205ENST00000456754 FMR1Q06787 632 aaKnown RBP eCLIP17.11■□□□□ 0.33
TIMP1-205ENST00000456754 DLGAP5Q15398 846 aa17.11■□□□□ 0.33
TIMP1-205ENST00000456754 MAP1SQ66K74 1059 aaPredicted RBP17.11■□□□□ 0.33
TIMP1-205ENST00000456754 USP50Q70EL3 339 aaPredicted RBP17.11■□□□□ 0.33
TIMP1-205ENST00000456754 HDAC9Q9UKV0 1011 aa17.11■□□□□ 0.33
TIMP1-205ENST00000456754 CLEC11AQ9Y240 323 aa17.11■□□□□ 0.33
TIMP1-205ENST00000456754 SUGT1Q9Y2Z0 365 aa17.11■□□□□ 0.33
TIMP1-205ENST00000456754 SPDYE2BA6NHP3 402 aa17.1■□□□□ 0.33
TIMP1-205ENST00000456754 GLRX3O76003 335 aaKnown RBP17.1■□□□□ 0.33
TIMP1-205ENST00000456754 SPDYE6P0CI01 402 aa17.1■□□□□ 0.33
TIMP1-205ENST00000456754 CACNB3P54284 484 aa17.1■□□□□ 0.33
TIMP1-205ENST00000456754 ANGEL2Q5VTE6 544 aaKnown RBP17.1■□□□□ 0.33
TIMP1-205ENST00000456754 SPTY2D1Q68D10 685 aaPredicted RBP17.1■□□□□ 0.33
TIMP1-205ENST00000456754 APOBEC3HQ6NTF7 200 aaKnown RBP17.1■□□□□ 0.33
TIMP1-205ENST00000456754 ZGPATQ8N5A5 531 aaKnown RBP17.1■□□□□ 0.33
TIMP1-205ENST00000456754 MAGEB6Q8N7X4 407 aa17.1■□□□□ 0.33
TIMP1-205ENST00000456754 TEKT1Q969V4 418 aa17.1■□□□□ 0.33
TIMP1-205ENST00000456754 TDRD3Q9H7E2 651 aaKnown RBP17.1■□□□□ 0.33
TIMP1-205ENST00000456754 GGA3Q9NZ52 723 aa17.1■□□□□ 0.33
TIMP1-205ENST00000456754 SERPINA10Q9UK55 444 aa17.1■□□□□ 0.33
TIMP1-205ENST00000456754 ERC2O15083 957 aa17.09■□□□□ 0.33
TIMP1-205ENST00000456754 MROH7-TTC4A0A0A0MT08 1334 aa17.08■□□□□ 0.32
TIMP1-205ENST00000456754 GAKO14976 1311 aa17.08■□□□□ 0.32
TIMP1-205ENST00000456754 MAST3O60307 1309 aa17.08■□□□□ 0.32
TIMP1-205ENST00000456754 ADM5C9JUS6 153 aa17.08■□□□□ 0.32
TIMP1-205ENST00000456754 GSPT1P15170 499 aaKnown RBP17.08■□□□□ 0.32
TIMP1-205ENST00000456754 PDE6AP16499 860 aa17.08■□□□□ 0.32
TIMP1-205ENST00000456754 CYP7A1P22680 504 aa17.08■□□□□ 0.32
TIMP1-205ENST00000456754 RGS3P49796 1198 aa17.08■□□□□ 0.32
TIMP1-205ENST00000456754 DYNLL1P63167 89 aaKnown RBP17.08■□□□□ 0.32
TIMP1-205ENST00000456754 HHIPL2Q6UWX4 724 aa17.08■□□□□ 0.32
TIMP1-205ENST00000456754 PNMA8AQ86V59 439 aaPredicted RBP17.08■□□□□ 0.32
TIMP1-205ENST00000456754 MTMR14Q8NCE2 650 aa17.08■□□□□ 0.32
TIMP1-205ENST00000456754 ZDHHC15Q96MV8 337 aa17.08■□□□□ 0.32
TIMP1-205ENST00000456754 GLIS2Q9BZE0 524 aaPredicted RBP17.08■□□□□ 0.32
TIMP1-205ENST00000456754 OSBPL3Q9H4L5 887 aa17.08■□□□□ 0.32
TIMP1-205ENST00000456754 AK9Q5TCS8 1911 aa17.08■□□□□ 0.32
TIMP1-205ENST00000456754 CDK5RAP2Q96SN8 1893 aa17.07■□□□□ 0.32
TIMP1-205ENST00000456754 TCRBV5S4A2TA0A5A2 114 aa17.07■□□□□ 0.32
TIMP1-205ENST00000456754 TRAF5O00463 557 aa17.07■□□□□ 0.32
TIMP1-205ENST00000456754 BTDP43251 543 aa17.07■□□□□ 0.32
TIMP1-205ENST00000456754 HDLBPQ00341 1268 aaKnown RBP17.07■□□□□ 0.32
TIMP1-205ENST00000456754 NAA16Q6N069 864 aaPredicted RBP17.07■□□□□ 0.32
TIMP1-205ENST00000456754 CDC42EP5Q6NZY7 148 aa17.07■□□□□ 0.32
TIMP1-205ENST00000456754 LDHDQ86WU2 507 aa17.07■□□□□ 0.32
TIMP1-205ENST00000456754 MIGA1Q8NAN2 632 aa17.07■□□□□ 0.32
TIMP1-205ENST00000456754 ZNF70Q9UC06 446 aaPredicted RBP17.07■□□□□ 0.32
TIMP1-205ENST00000456754 ZNF532Q9HCE3 1301 aa17.06■□□□□ 0.32
TIMP1-205ENST00000456754 TTF1Q15361 905 aaPredicted RBP17.06■□□□□ 0.32
TIMP1-205ENST00000456754 SLC9C2Q5TAH2 1124 aa17.06■□□□□ 0.32
TIMP1-205ENST00000456754 PRAMEF18Q5VWM3 479 aa17.06■□□□□ 0.32
TIMP1-205ENST00000456754 USP48Q86UV5 1035 aa17.06■□□□□ 0.32
TIMP1-205ENST00000456754 KBTBD3Q8NAB2 608 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms