RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 ENGASEQ8NFI3 743 aa14.27□□□□□ -0.12
SEMA4D-213ENST00000455551 BCL9O00512 1426 aa14.27□□□□□ -0.13
SEMA4D-213ENST00000455551 FBXO18Q8NFZ0 1043 aa14.27□□□□□ -0.13
SEMA4D-213ENST00000455551 CLIP2Q9UDT6 1046 aa14.27□□□□□ -0.13
SEMA4D-213ENST00000455551 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.27□□□□□ -0.13
SEMA4D-213ENST00000455551 ZSCAN25Q6NSZ9 544 aa14.27□□□□□ -0.13
SEMA4D-213ENST00000455551 MICU3Q86XE3 530 aa14.27□□□□□ -0.13
SEMA4D-213ENST00000455551 MRPS27Q92552 414 aaKnown RBP14.27□□□□□ -0.13
SEMA4D-213ENST00000455551 SDF4Q9BRK5 362 aa14.27□□□□□ -0.13
SEMA4D-213ENST00000455551 BECN2A8MW95 431 aa14.26□□□□□ -0.13
SEMA4D-213ENST00000455551 EXOC5O00471 708 aa14.26□□□□□ -0.13
SEMA4D-213ENST00000455551 DYNC1I1O14576 645 aa14.26□□□□□ -0.13
SEMA4D-213ENST00000455551 IQCB1Q15051 598 aa14.26□□□□□ -0.13
SEMA4D-213ENST00000455551 STK11IPQ8N1F8 1099 aa14.26□□□□□ -0.13
SEMA4D-213ENST00000455551 FBXL16Q8N461 479 aa14.26□□□□□ -0.13
SEMA4D-213ENST00000455551 MYL10Q9BUA6 226 aa14.26□□□□□ -0.13
SEMA4D-213ENST00000455551 STRCQ7RTU9 1775 aa14.26□□□□□ -0.13
SEMA4D-213ENST00000455551 CTAGE5O15320 804 aa14.26□□□□□ -0.13
SEMA4D-213ENST00000455551 NDUFA8P51970 172 aa14.26□□□□□ -0.13
SEMA4D-213ENST00000455551 LINC00301Q8NCQ3 95 aa14.26□□□□□ -0.13
SEMA4D-213ENST00000455551 AIDAQ96BJ3 306 aa14.26□□□□□ -0.13
SEMA4D-213ENST00000455551 CHMP4CQ96CF2 233 aa14.26□□□□□ -0.13
SEMA4D-213ENST00000455551 RTEL1Q9NZ71 1219 aa14.26□□□□□ -0.13
SEMA4D-213ENST00000455551 ABCC12Q96J65 1359 aa14.26□□□□□ -0.13
SEMA4D-213ENST00000455551 TTF1Q15361 905 aaPredicted RBP14.26□□□□□ -0.13
SEMA4D-213ENST00000455551 CCDC144BQ3MJ40 725 aa14.26□□□□□ -0.13
SEMA4D-213ENST00000455551 MYSM1Q5VVJ2 828 aa14.26□□□□□ -0.13
SEMA4D-213ENST00000455551 ATL3Q6DD88 541 aa14.26□□□□□ -0.13
SEMA4D-213ENST00000455551 MYRIPQ8NFW9 859 aa14.26□□□□□ -0.13
SEMA4D-213ENST00000455551 PHKBQ93100 1093 aa14.26□□□□□ -0.13
SEMA4D-213ENST00000455551 SEC31BQ9NQW1 1179 aa14.26□□□□□ -0.13
SEMA4D-213ENST00000455551 ANGEL1Q9UNK9 670 aaKnown RBP14.25□□□□□ -0.13
SEMA4D-213ENST00000455551 NEDD4P46934 1319 aa14.25□□□□□ -0.13
SEMA4D-213ENST00000455551 METAP2P50579 478 aaKnown RBP eCLIP14.25□□□□□ -0.13
SEMA4D-213ENST00000455551 ACSBG1Q96GR2 724 aa14.25□□□□□ -0.13
SEMA4D-213ENST00000455551 LRP6O75581 1613 aa14.25□□□□□ -0.13
SEMA4D-213ENST00000455551 PUM3Q15397 648 aaKnown RBP14.24□□□□□ -0.13
SEMA4D-213ENST00000455551 SYNE3Q6ZMZ3 975 aa14.24□□□□□ -0.13
SEMA4D-213ENST00000455551 NFXL1Q6ZNB6 911 aa14.24□□□□□ -0.13
SEMA4D-213ENST00000455551 FMR1NBQ8N0W7 255 aaPredicted RBP14.24□□□□□ -0.13
SEMA4D-213ENST00000455551 MAGEB6Q8N7X4 407 aa14.24□□□□□ -0.13
SEMA4D-213ENST00000455551 MYH3P11055 1940 aa14.24□□□□□ -0.13
SEMA4D-213ENST00000455551 SPTLC2O15270 562 aa14.24□□□□□ -0.13
SEMA4D-213ENST00000455551 MARCKSP29966 332 aaPredicted RBP14.24□□□□□ -0.13
SEMA4D-213ENST00000455551 CTDSPL2Q05D32 466 aa14.24□□□□□ -0.13
SEMA4D-213ENST00000455551 AOPEPQ8N6M6 819 aa14.24□□□□□ -0.13
SEMA4D-213ENST00000455551 PDCL3Q9H2J4 239 aa14.24□□□□□ -0.13
SEMA4D-213ENST00000455551 BIN1O00499 593 aa14.24□□□□□ -0.13
SEMA4D-213ENST00000455551 KIF23Q02241 960 aaPredicted RBP14.24□□□□□ -0.13
SEMA4D-213ENST00000455551 RASGRF1Q13972 1273 aa14.24□□□□□ -0.13
SEMA4D-213ENST00000455551 ARID5BQ14865 1188 aa14.24□□□□□ -0.13
SEMA4D-213ENST00000455551 UBE3CQ15386 1083 aa14.24□□□□□ -0.13
SEMA4D-213ENST00000455551 SUSD4Q5VX71 490 aa14.24□□□□□ -0.13
SEMA4D-213ENST00000455551 ADALQ6DHV7 355 aa14.24□□□□□ -0.13
SEMA4D-213ENST00000455551 ALG1Q9BT22 464 aa14.24□□□□□ -0.13
SEMA4D-213ENST00000455551 NUP98P52948 1817 aa14.24□□□□□ -0.13
SEMA4D-213ENST00000455551 UBE2Q2LH0YL09 131 aa14.23□□□□□ -0.13
SEMA4D-213ENST00000455551 SH2B2O14492 632 aaPredicted RBP14.23□□□□□ -0.13
SEMA4D-213ENST00000455551 MBD4O95243 580 aa14.23□□□□□ -0.13
SEMA4D-213ENST00000455551 CDC27P30260 824 aa14.23□□□□□ -0.13
SEMA4D-213ENST00000455551 LPIN2Q92539 896 aa14.23□□□□□ -0.13
SEMA4D-213ENST00000455551 PRIMPOLQ96LW4 560 aa14.23□□□□□ -0.13
SEMA4D-213ENST00000455551 ARMT1Q9H993 441 aa14.23□□□□□ -0.13
SEMA4D-213ENST00000455551 ANO10Q9NW15 660 aa14.23□□□□□ -0.13
SEMA4D-213ENST00000455551 ARID4AP29374 1257 aaPredicted RBP14.23□□□□□ -0.13
SEMA4D-213ENST00000455551 SPATA5Q8NB90 893 aa14.23□□□□□ -0.13
SEMA4D-213ENST00000455551 CACTINQ8WUQ7 758 aaKnown RBP14.23□□□□□ -0.13
SEMA4D-213ENST00000455551 MPHOSPH8Q99549 860 aa14.23□□□□□ -0.13
SEMA4D-213ENST00000455551 IL6STP40189 918 aaPredicted RBP14.23□□□□□ -0.13
SEMA4D-213ENST00000455551 APOA5Q6Q788 366 aa14.23□□□□□ -0.13
SEMA4D-213ENST00000455551 DHX40Q8IX18 779 aaKnown RBP14.23□□□□□ -0.13
SEMA4D-213ENST00000455551 ZNF34Q8IZ26 560 aa14.23□□□□□ -0.13
SEMA4D-213ENST00000455551 C16orf45Q96MC5 204 aaPredicted RBP14.23□□□□□ -0.13
SEMA4D-213ENST00000455551 STRBPQ96SI9 672 aaKnown RBP14.23□□□□□ -0.13
SEMA4D-213ENST00000455551 EPB41L4AQ9HCS5 686 aaPredicted RBP14.23□□□□□ -0.13
SEMA4D-213ENST00000455551 TOMM22Q9NS69 142 aa14.23□□□□□ -0.13
SEMA4D-213ENST00000455551 ZMYM6O95789 1325 aa14.23□□□□□ -0.13
SEMA4D-213ENST00000455551 TCRBV5S4A2TA0A5A2 114 aa14.22□□□□□ -0.13
SEMA4D-213ENST00000455551 CAVIN2O95810 425 aa14.22□□□□□ -0.13
SEMA4D-213ENST00000455551 UQCRFS1P1P0C7P4 283 aa14.22□□□□□ -0.13
SEMA4D-213ENST00000455551 GNL2Q13823 731 aaKnown RBP14.22□□□□□ -0.13
SEMA4D-213ENST00000455551 RRP12Q5JTH9 1297 aaKnown RBP14.22□□□□□ -0.13
SEMA4D-213ENST00000455551 CEP57L1Q8IYX8 460 aa14.22□□□□□ -0.13
SEMA4D-213ENST00000455551 KCNG4Q8TDN1 519 aa14.22□□□□□ -0.13
SEMA4D-213ENST00000455551 IQSEC3Q9UPP2 1182 aaPredicted RBP14.22□□□□□ -0.13
SEMA4D-213ENST00000455551 DISP2A7MBM2 1401 aa14.22□□□□□ -0.13
SEMA4D-213ENST00000455551 SLC5A1P13866 664 aa14.22□□□□□ -0.13
SEMA4D-213ENST00000455551 ANO1Q5XXA6 986 aa14.22□□□□□ -0.13
SEMA4D-213ENST00000455551 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.22□□□□□ -0.13
SEMA4D-213ENST00000455551 FILIP1Q7Z7B0 1213 aa14.22□□□□□ -0.13
SEMA4D-213ENST00000455551 ZNF512BQ96KM6 892 aaPredicted RBP14.22□□□□□ -0.13
SEMA4D-213ENST00000455551 NAPBQ9H115 298 aa14.22□□□□□ -0.13
SEMA4D-213ENST00000455551 POLR3EQ9NVU0 708 aa14.22□□□□□ -0.13
SEMA4D-213ENST00000455551 SLIT2O94813 1529 aa14.22□□□□□ -0.13
SEMA4D-213ENST00000455551 ERVV-1B6SEH8 477 aa14.22□□□□□ -0.13
SEMA4D-213ENST00000455551 PRKAB2O43741 272 aa14.22□□□□□ -0.13
SEMA4D-213ENST00000455551 TMEM67Q5HYA8 995 aa14.22□□□□□ -0.13
SEMA4D-213ENST00000455551 BRAPQ7Z569 592 aa14.22□□□□□ -0.13
SEMA4D-213ENST00000455551 FGFR2P21802 821 aa14.21□□□□□ -0.13
SEMA4D-213ENST00000455551 ZRSR1Q15695 479 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms