RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 ZNF280DQ6N043 979 aa11.08□□□□□ -0.64
LINC01940-201ENST00000455228 USHBP1Q8N6Y0 703 aa11.08□□□□□ -0.64
LINC01940-201ENST00000455228 BABAM1Q9NWV8 329 aa11.08□□□□□ -0.64
LINC01940-201ENST00000455228 NRBP1Q9UHY1 535 aa11.08□□□□□ -0.64
LINC01940-201ENST00000455228 RIMS1Q86UR5 1692 aaKnown RBP11.08□□□□□ -0.64
LINC01940-201ENST00000455228 RTN3O95197 1032 aaPredicted RBP11.07□□□□□ -0.64
LINC01940-201ENST00000455228 SLC8A3P57103 927 aa11.07□□□□□ -0.64
LINC01940-201ENST00000455228 NAA30Q147X3 362 aaPredicted RBP11.07□□□□□ -0.64
LINC01940-201ENST00000455228 NECTIN1Q15223 517 aa11.07□□□□□ -0.64
LINC01940-201ENST00000455228 BEND3Q5T5X7 828 aa11.07□□□□□ -0.64
LINC01940-201ENST00000455228 FSD1Q9BTV5 496 aa11.07□□□□□ -0.64
LINC01940-201ENST00000455228 PA2G4Q9UQ80 394 aaKnown RBP11.07□□□□□ -0.64
LINC01940-201ENST00000455228 PEAK1Q9H792 1746 aa11.07□□□□□ -0.64
LINC01940-201ENST00000455228 TUBGCP6Q96RT7 1819 aa11.07□□□□□ -0.64
LINC01940-201ENST00000455228 TECPR2O15040 1411 aa11.07□□□□□ -0.64
LINC01940-201ENST00000455228 H3BQV1 296 aa11.07□□□□□ -0.64
LINC01940-201ENST00000455228 ECEL1O95672 775 aa11.07□□□□□ -0.64
LINC01940-201ENST00000455228 FAM200BP0CF97 657 aa11.07□□□□□ -0.64
LINC01940-201ENST00000455228 IFFO2Q5TF58 517 aa11.07□□□□□ -0.64
LINC01940-201ENST00000455228 KCNN1Q92952 543 aa11.07□□□□□ -0.64
LINC01940-201ENST00000455228 FAM227BQ96M60 508 aa11.07□□□□□ -0.64
LINC01940-201ENST00000455228 DNAJC25Q9H1X3 360 aa11.07□□□□□ -0.64
LINC01940-201ENST00000455228 PXDNLA1KZ92 1463 aa11.07□□□□□ -0.64
LINC01940-201ENST00000455228 RBM47A0AV96 593 aaKnown RBP11.07□□□□□ -0.64
LINC01940-201ENST00000455228 SASH1O94885 1247 aa11.07□□□□□ -0.64
LINC01940-201ENST00000455228 OATP04181 439 aa11.07□□□□□ -0.64
LINC01940-201ENST00000455228 CLCN6P51797 869 aa11.07□□□□□ -0.64
LINC01940-201ENST00000455228 ZNF75DP51815 510 aa11.07□□□□□ -0.64
LINC01940-201ENST00000455228 ZSCAN25Q6NSZ9 544 aa11.07□□□□□ -0.64
LINC01940-201ENST00000455228 RPUSD2Q8IZ73 545 aaKnown RBP11.07□□□□□ -0.64
LINC01940-201ENST00000455228 CRACR2AQ9BSW2 395 aa11.07□□□□□ -0.64
LINC01940-201ENST00000455228 SETD1AO15047 1707 aaKnown RBP11.06□□□□□ -0.64
LINC01940-201ENST00000455228 SPATA31D1Q6ZQQ2 1576 aa11.06□□□□□ -0.64
LINC01940-201ENST00000455228 CEP170BQ9Y4F5 1589 aaPredicted RBP11.06□□□□□ -0.64
LINC01940-201ENST00000455228 NEBLO76041 1014 aa11.06□□□□□ -0.64
LINC01940-201ENST00000455228 TRPC1P48995 793 aa11.06□□□□□ -0.64
LINC01940-201ENST00000455228 DEUP1Q05D60 604 aa11.06□□□□□ -0.64
LINC01940-201ENST00000455228 TEFQ10587 303 aa11.06□□□□□ -0.64
LINC01940-201ENST00000455228 G3BP1Q13283 466 aaKnown RBP eCLIP11.06□□□□□ -0.64
LINC01940-201ENST00000455228 NMIQ13287 307 aaPredicted RBP11.06□□□□□ -0.64
LINC01940-201ENST00000455228 RCSD1Q6JBY9 416 aa11.06□□□□□ -0.64
LINC01940-201ENST00000455228 LARP1Q6PKG0 1096 aaKnown RBP11.06□□□□□ -0.64
LINC01940-201ENST00000455228 ACRBPQ8NEB7 543 aa11.06□□□□□ -0.64
LINC01940-201ENST00000455228 IQCGQ9H095 443 aaKnown RBP11.06□□□□□ -0.64
LINC01940-201ENST00000455228 CPSF2Q9P2I0 782 aaKnown RBP11.06□□□□□ -0.64
LINC01940-201ENST00000455228 HOXC9P31274 260 aa11.06□□□□□ -0.64
LINC01940-201ENST00000455228 ST3GAL1Q11201 340 aa11.06□□□□□ -0.64
LINC01940-201ENST00000455228 LEO1Q8WVC0 666 aaPredicted RBP11.06□□□□□ -0.64
LINC01940-201ENST00000455228 UTP6Q9NYH9 597 aaKnown RBP11.06□□□□□ -0.64
LINC01940-201ENST00000455228 SLC27A2O14975 620 aa11.05□□□□□ -0.64
LINC01940-201ENST00000455228 SFSWAPQ12872 951 aaKnown RBP11.05□□□□□ -0.64
LINC01940-201ENST00000455228 SAMD3Q8N6K7 520 aa11.05□□□□□ -0.64
LINC01940-201ENST00000455228 KCNV2Q8TDN2 545 aa11.05□□□□□ -0.64
LINC01940-201ENST00000455228 C17orf50Q8WW18 174 aa11.05□□□□□ -0.64
LINC01940-201ENST00000455228 CCDC8Q9H0W5 538 aaPredicted RBP11.05□□□□□ -0.64
LINC01940-201ENST00000455228 CLSTN2Q9H4D0 955 aa11.05□□□□□ -0.64
LINC01940-201ENST00000455228 BECN2A8MW95 431 aa11.05□□□□□ -0.64
LINC01940-201ENST00000455228 CEBPZQ03701 1054 aaKnown RBP11.05□□□□□ -0.64
LINC01940-201ENST00000455228 IFT88Q13099 833 aa11.05□□□□□ -0.64
LINC01940-201ENST00000455228 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.05□□□□□ -0.64
LINC01940-201ENST00000455228 POLR3CQ9BUI4 534 aaPredicted RBP11.05□□□□□ -0.64
LINC01940-201ENST00000455228 BOLA2Q9H3K6 86 aa11.05□□□□□ -0.64
LINC01940-201ENST00000455228 USP42Q9H9J4 1324 aaKnown RBP11.05□□□□□ -0.64
LINC01940-201ENST00000455228 XRN1Q8IZH2 1706 aaKnown RBP11.05□□□□□ -0.64
LINC01940-201ENST00000455228 EME2A4GXA9 379 aaPredicted RBP11.05□□□□□ -0.64
LINC01940-201ENST00000455228 NR1I2O75469 434 aa11.05□□□□□ -0.64
LINC01940-201ENST00000455228 SCRN1Q12765 414 aa11.05□□□□□ -0.64
LINC01940-201ENST00000455228 MAP4K1Q92918 833 aa11.05□□□□□ -0.64
LINC01940-201ENST00000455228 ZNF215Q9UL58 517 aaPredicted RBP11.05□□□□□ -0.64
LINC01940-201ENST00000455228 CPLX2Q6PUV4 134 aaKnown RBP11.04□□□□□ -0.64
LINC01940-201ENST00000455228 OGFOD1Q8N543 542 aa11.04□□□□□ -0.64
LINC01940-201ENST00000455228 ABTB2Q8N961 1025 aa11.04□□□□□ -0.64
LINC01940-201ENST00000455228 ADAM21Q9UKJ8 722 aa11.04□□□□□ -0.64
LINC01940-201ENST00000455228 RGPD1P0DJD0 1748 aa11.04□□□□□ -0.64
LINC01940-201ENST00000455228 EXOC5O00471 708 aa11.04□□□□□ -0.64
LINC01940-201ENST00000455228 EIF4A1P60842 406 aaKnown RBP11.04□□□□□ -0.64
LINC01940-201ENST00000455228 TDRD7Q8NHU6 1098 aaKnown RBP11.04□□□□□ -0.64
LINC01940-201ENST00000455228 CTCFLQ8NI51 663 aaPredicted RBP11.04□□□□□ -0.64
LINC01940-201ENST00000455228 PIK3R5Q8WYR1 880 aa11.04□□□□□ -0.64
LINC01940-201ENST00000455228 SIL1Q9H173 461 aa11.04□□□□□ -0.64
LINC01940-201ENST00000455228 MAP3K2Q9Y2U5 619 aa11.04□□□□□ -0.64
LINC01940-201ENST00000455228 NRXN3Q9Y4C0 1643 aa11.04□□□□□ -0.64
LINC01940-201ENST00000455228 CACNA1FO60840 1977 aa11.04□□□□□ -0.64
LINC01940-201ENST00000455228 TUBB4AP04350 444 aa11.04□□□□□ -0.64
LINC01940-201ENST00000455228 NEXNQ0ZGT2 675 aa11.04□□□□□ -0.64
LINC01940-201ENST00000455228 PKN1Q16512 942 aa11.04□□□□□ -0.64
LINC01940-201ENST00000455228 CEP135Q66GS9 1140 aa11.04□□□□□ -0.64
LINC01940-201ENST00000455228 KLHL10Q6JEL2 608 aa11.04□□□□□ -0.64
LINC01940-201ENST00000455228 NFXL1Q6ZNB6 911 aa11.04□□□□□ -0.64
LINC01940-201ENST00000455228 OR8K1Q8NGG5 319 aa11.04□□□□□ -0.64
LINC01940-201ENST00000455228 BTBD11A6QL63 1104 aa11.03□□□□□ -0.64
LINC01940-201ENST00000455228 RPS6KB1P23443 525 aa11.03□□□□□ -0.64
LINC01940-201ENST00000455228 PAX3P23760 479 aa11.03□□□□□ -0.64
LINC01940-201ENST00000455228 GBP6Q6ZN66 633 aa11.03□□□□□ -0.64
LINC01940-201ENST00000455228 PLA2G4DQ86XP0 818 aa11.03□□□□□ -0.64
LINC01940-201ENST00000455228 CACTINQ8WUQ7 758 aaKnown RBP11.03□□□□□ -0.64
LINC01940-201ENST00000455228 DDX11Q96FC9 970 aa11.03□□□□□ -0.64
LINC01940-201ENST00000455228 CFAP45Q9UL16 551 aa11.03□□□□□ -0.64
LINC01940-201ENST00000455228 SLU7O95391 586 aaKnown RBP11.03□□□□□ -0.64
LINC01940-201ENST00000455228 CAVIN2O95810 425 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms