RNA–Protein interactions for RNA: ENST00000453466.1

PMPCB-205, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,509 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-205ENST00000453466 GGA3Q9NZ52 723 aa24.45■■□□□ 1.51
PMPCB-205ENST00000453466 HMG20BQ9P0W2 317 aa24.45■■□□□ 1.51
PMPCB-205ENST00000453466 IFIT2P09913 472 aaKnown RBP24.45■■□□□ 1.5
PMPCB-205ENST00000453466 GRIK5Q16478 980 aa24.45■■□□□ 1.5
PMPCB-205ENST00000453466 ANGEL2Q5VTE6 544 aaKnown RBP24.45■■□□□ 1.5
PMPCB-205ENST00000453466 BCL11AQ9H165 835 aa24.45■■□□□ 1.5
PMPCB-205ENST00000453466 TLR7Q9NYK1 1049 aaKnown RBP24.45■■□□□ 1.5
PMPCB-205ENST00000453466 ZNF646O15015 1829 aaPredicted RBP24.44■■□□□ 1.5
PMPCB-205ENST00000453466 PASKQ96RG2 1323 aa24.44■■□□□ 1.5
PMPCB-205ENST00000453466 LDHBP07195 334 aaKnown RBP24.44■■□□□ 1.5
PMPCB-205ENST00000453466 APLP1P51693 650 aa24.44■■□□□ 1.5
PMPCB-205ENST00000453466 SPTY2D1Q68D10 685 aaPredicted RBP24.44■■□□□ 1.5
PMPCB-205ENST00000453466 KRT26Q7Z3Y9 468 aa24.44■■□□□ 1.5
PMPCB-205ENST00000453466 SULF1Q8IWU6 871 aa24.44■■□□□ 1.5
PMPCB-205ENST00000453466 ZBED3Q96IU2 234 aaPredicted RBP24.44■■□□□ 1.5
PMPCB-205ENST00000453466 GLIS2Q9BZE0 524 aaPredicted RBP24.44■■□□□ 1.5
PMPCB-205ENST00000453466 ARAP2Q8WZ64 1704 aa24.43■■□□□ 1.5
PMPCB-205ENST00000453466 MYO1BO43795 1136 aa24.43■■□□□ 1.5
PMPCB-205ENST00000453466 CRKP46108 304 aa24.43■■□□□ 1.5
PMPCB-205ENST00000453466 USP48Q86UV5 1035 aa24.43■■□□□ 1.5
PMPCB-205ENST00000453466 SKAP1Q86WV1 359 aa24.43■■□□□ 1.5
PMPCB-205ENST00000453466 TEKT1Q969V4 418 aa24.43■■□□□ 1.5
PMPCB-205ENST00000453466 ABCF2Q9UG63 623 aa24.43■■□□□ 1.5
PMPCB-205ENST00000453466 COL1A1P02452 1464 aaPredicted RBP24.43■■□□□ 1.5
PMPCB-205ENST00000453466 ASTN2O75129 1339 aaPredicted RBP24.43■■□□□ 1.5
PMPCB-205ENST00000453466 PITPNM2Q9BZ72 1349 aa24.43■■□□□ 1.5
PMPCB-205ENST00000453466 SPDYE2BA6NHP3 402 aa24.42■■□□□ 1.5
PMPCB-205ENST00000453466 SPDYE6P0CI01 402 aa24.42■■□□□ 1.5
PMPCB-205ENST00000453466 MCAMP43121 646 aa24.42■■□□□ 1.5
PMPCB-205ENST00000453466 PRMT6Q96LA8 375 aaPredicted RBP24.41■■□□□ 1.5
PMPCB-205ENST00000453466 TRAF5O00463 557 aa24.4■■□□□ 1.5
PMPCB-205ENST00000453466 PRDX5P30044 214 aa24.4■■□□□ 1.5
PMPCB-205ENST00000453466 RGS3P49796 1198 aa24.4■■□□□ 1.5
PMPCB-205ENST00000453466 LNPKQ9C0E8 428 aa24.4■■□□□ 1.5
PMPCB-205ENST00000453466 ZBTB47Q9UFB7 747 aaPredicted RBP24.4■■□□□ 1.5
PMPCB-205ENST00000453466 PDE4AP27815 886 aa24.4■■□□□ 1.5
PMPCB-205ENST00000453466 HHIPL2Q6UWX4 724 aa24.4■■□□□ 1.5
PMPCB-205ENST00000453466 PI16Q6UXB8 463 aa24.4■■□□□ 1.5
PMPCB-205ENST00000453466 SNRKQ9NRH2 765 aa24.4■■□□□ 1.5
PMPCB-205ENST00000453466 PCDHAC2Q9Y5I4 1007 aa24.4■■□□□ 1.5
PMPCB-205ENST00000453466 ERICH6Q7L0X2 663 aa24.39■■□□□ 1.49
PMPCB-205ENST00000453466 SMARCA5O60264 1052 aaPredicted RBP24.38■■□□□ 1.49
PMPCB-205ENST00000453466 APOBEC3FQ8IUX4 373 aaKnown RBP24.38■■□□□ 1.49
PMPCB-205ENST00000453466 SLF2Q8IX21 1173 aa24.38■■□□□ 1.49
PMPCB-205ENST00000453466 TMEM88BA6NKF7 163 aa24.37■■□□□ 1.49
PMPCB-205ENST00000453466 ADM5C9JUS6 153 aa24.37■■□□□ 1.49
PMPCB-205ENST00000453466 TBC1D9Q6ZT07 1266 aa24.37■■□□□ 1.49
PMPCB-205ENST00000453466 DZIP1Q86YF9 867 aaKnown RBP24.37■■□□□ 1.49
PMPCB-205ENST00000453466 ZDHHC15Q96MV8 337 aa24.37■■□□□ 1.49
PMPCB-205ENST00000453466 LRP2BPQ9P2M1 347 aa24.37■■□□□ 1.49
PMPCB-205ENST00000453466 FMR1Q06787 632 aaKnown RBP eCLIP24.36■■□□□ 1.49
PMPCB-205ENST00000453466 ZAP70P43403 619 aa24.35■■□□□ 1.49
PMPCB-205ENST00000453466 TDRD3Q9H7E2 651 aaKnown RBP24.35■■□□□ 1.49
PMPCB-205ENST00000453466 CREBZFQ9NS37 354 aa24.35■■□□□ 1.49
PMPCB-205ENST00000453466 RAI14Q9P0K7 980 aa24.35■■□□□ 1.49
PMPCB-205ENST00000453466 CLRN2A0PK11 232 aa24.35■■□□□ 1.49
PMPCB-205ENST00000453466 CELF2O95319 508 aaKnown RBP24.35■■□□□ 1.49
PMPCB-205ENST00000453466 DIXDC1Q155Q3 683 aa24.35■■□□□ 1.49
PMPCB-205ENST00000453466 VEZTQ9HBM0 779 aa24.35■■□□□ 1.49
PMPCB-205ENST00000453466 ZNF70Q9UC06 446 aaPredicted RBP24.35■■□□□ 1.49
PMPCB-205ENST00000453466 CYP2E1P05181 493 aaPredicted RBP24.34■■□□□ 1.49
PMPCB-205ENST00000453466 SPDYE2Q495Y8 402 aa24.34■■□□□ 1.49
PMPCB-205ENST00000453466 APOBEC3HQ6NTF7 200 aaKnown RBP24.34■■□□□ 1.49
PMPCB-205ENST00000453466 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.34■■□□□ 1.49
PMPCB-205ENST00000453466 ZNF408Q9H9D4 720 aa24.34■■□□□ 1.49
PMPCB-205ENST00000453466 MYH13Q9UKX3 1938 aa24.33■■□□□ 1.49
PMPCB-205ENST00000453466 IGSF3O75054 1194 aa24.33■■□□□ 1.49
PMPCB-205ENST00000453466 LDHCP07864 332 aa24.33■■□□□ 1.49
PMPCB-205ENST00000453466 GSTO1P78417 241 aa24.33■■□□□ 1.49
PMPCB-205ENST00000453466 MECOMQ03112 1051 aa24.33■■□□□ 1.49
PMPCB-205ENST00000453466 CST9Q5W186 159 aa24.33■■□□□ 1.49
PMPCB-205ENST00000453466 DLK2Q6UY11 383 aa24.33■■□□□ 1.49
PMPCB-205ENST00000453466 SCAF8Q9UPN6 1271 aaKnown RBP24.33■■□□□ 1.49
PMPCB-205ENST00000453466 DAGLAQ9Y4D2 1042 aa24.33■■□□□ 1.49
PMPCB-205ENST00000453466 TNFAIP1Q13829 316 aa24.32■■□□□ 1.48
PMPCB-205ENST00000453466 CDCA5Q96FF9 252 aa24.32■■□□□ 1.48
PMPCB-205ENST00000453466 FAM163AQ96GL9 167 aaPredicted RBP24.32■■□□□ 1.48
PMPCB-205ENST00000453466 GPATCH3Q96I76 525 aa24.32■■□□□ 1.48
PMPCB-205ENST00000453466 TMOD2Q9NZR1 351 aa24.32■■□□□ 1.48
PMPCB-205ENST00000453466 ATP5JP18859 108 aa24.31■■□□□ 1.48
PMPCB-205ENST00000453466 NSUN4Q96CB9 384 aaKnown RBP24.31■■□□□ 1.48
PMPCB-205ENST00000453466 DEFB129Q9H1M3 183 aa24.31■■□□□ 1.48
PMPCB-205ENST00000453466 AOX1Q06278 1338 aa24.31■■□□□ 1.48
PMPCB-205ENST00000453466 HTRA3P83110 453 aa24.3■■□□□ 1.48
PMPCB-205ENST00000453466 PLEKHM2Q8IWE5 1019 aa24.3■■□□□ 1.48
PMPCB-205ENST00000453466 PPP2R3BQ9Y5P8 575 aa24.3■■□□□ 1.48
PMPCB-205ENST00000453466 TNNI2P48788 182 aa24.3■■□□□ 1.48
PMPCB-205ENST00000453466 TTF1Q15361 905 aaPredicted RBP24.3■■□□□ 1.48
PMPCB-205ENST00000453466 ECHDC1Q9NTX5 307 aa24.3■■□□□ 1.48
PMPCB-205ENST00000453466 GAKO14976 1311 aa24.29■■□□□ 1.48
PMPCB-205ENST00000453466 NF2P35240 595 aa24.29■■□□□ 1.48
PMPCB-205ENST00000453466 BOLA2Q9H3K6 86 aa24.29■■□□□ 1.48
PMPCB-205ENST00000453466 OSBPL3Q9H4L5 887 aa24.29■■□□□ 1.48
PMPCB-205ENST00000453466 PIH1D3Q9NQM4 214 aaKnown RBP24.29■■□□□ 1.48
PMPCB-205ENST00000453466 ABT1Q9ULW3 272 aaKnown RBP24.29■■□□□ 1.48
PMPCB-205ENST00000453466 NDUFB9Q9Y6M9 179 aa24.29■■□□□ 1.48
PMPCB-205ENST00000453466 TCP10L2B9ZVM9 353 aa24.28■■□□□ 1.48
PMPCB-205ENST00000453466 RASA3Q14644 834 aa24.28■■□□□ 1.48
PMPCB-205ENST00000453466 PRAMEF18Q5VWM3 479 aa24.28■■□□□ 1.48
PMPCB-205ENST00000453466 NAA16Q6N069 864 aaPredicted RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms