RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 NFXL1Q6ZNB6 911 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 APBB1IPQ7Z5R6 666 aaPredicted RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 RAB11FIP4Q86YS3 637 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 TMEM87AQ8NBN3 555 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 LEO1Q8WVC0 666 aaPredicted RBP2.49□□□□□ -2.01
USP53-202ENST00000450251 SELENOOQ9BVL4 669 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 ATP6V0A4Q9HBG4 840 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 HMG20BQ9P0W2 317 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 DISP1Q96F81 1524 aa2.49□□□□□ -2.01
USP53-202ENST00000450251 ST20-MTHFSA0A0A6YYL1 179 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 STXBP3O00186 592 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 CPP00450 1065 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 GSTA2P09210 222 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 SKIP12755 728 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 FERP16591 822 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 ME1P48163 572 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 LIG3P49916 1009 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 GNGT1P63211 74 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 TUBA4AP68366 448 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 DEUP1Q05D60 604 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 G3BP1Q13283 466 aaKnown RBP eCLIP2.48□□□□□ -2.01
USP53-202ENST00000450251 TTC22Q5TAA0 569 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 NUGGCQ68CJ6 796 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 TBC1D9Q6ZT07 1266 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 PODNQ7Z5L7 613 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 ST13P4Q8IZP2 240 aaPredicted RBP2.48□□□□□ -2.01
USP53-202ENST00000450251 KIF1BPQ96EK5 621 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 ZNF692Q9BU19 519 aaPredicted RBP2.48□□□□□ -2.01
USP53-202ENST00000450251 ARHGAP31Q2M1Z3 1444 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 ERBB4Q15303 1308 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 KDM5CP41229 1560 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 TCOF1Q13428 1488 aaKnown RBP2.48□□□□□ -2.01
USP53-202ENST00000450251 ADCY10Q96PN6 1610 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 LRRIQ3A6PVS8 624 aaPredicted RBP2.48□□□□□ -2.01
USP53-202ENST00000450251 ABLIM1O14639 778 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 VCAM1P19320 739 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 MRPS35P82673 323 aaKnown RBP2.48□□□□□ -2.01
USP53-202ENST00000450251 FKBP15Q5T1M5 1219 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 GKAP1Q5VSY0 366 aaPredicted RBP2.48□□□□□ -2.01
USP53-202ENST00000450251 PARP9Q8IXQ6 854 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 TDRD7Q8NHU6 1098 aaKnown RBP2.48□□□□□ -2.01
USP53-202ENST00000450251 KCNG4Q8TDN1 519 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 ARHGAP45Q92619 1136 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 BHMTQ93088 406 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 PARVBQ9HBI1 364 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 A1CFQ9NQ94 594 aaKnown RBP2.48□□□□□ -2.01
USP53-202ENST00000450251 EXOC1Q9NV70 894 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 ABCF2Q9UG63 623 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 FAM135BQ49AJ0 1406 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 NCOA3Q9Y6Q9 1424 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 ARHGEF40Q8TER5 1519 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 KDM5AP29375 1690 aaKnown RBP2.48□□□□□ -2.01
USP53-202ENST00000450251 AHCYL1O43865 530 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 IGSF3O75054 1194 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 RPS6KA5O75582 802 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 TMCC1O94876 653 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 CLCN6P51797 869 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 LAMB3Q13751 1172 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 FYB2Q5VWT5 728 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 ENAHQ8N8S7 591 aaPredicted RBP2.48□□□□□ -2.01
USP53-202ENST00000450251 USP33Q8TEY7 942 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 ANKRD24Q8TF21 1146 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 BHMT2Q9H2M3 363 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 FAM114A2Q9NRY5 505 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 RMND1Q9NWS8 449 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 ADAMTS8Q9UP79 889 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 NUB1Q9Y5A7 615 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 SYNMO15061 1565 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 HNRNPCL1O60812 293 aaKnown RBP2.48□□□□□ -2.01
USP53-202ENST00000450251 SLC3A2P08195 630 aaKnown RBP2.48□□□□□ -2.01
USP53-202ENST00000450251 IFIT2P09913 472 aaKnown RBP2.48□□□□□ -2.01
USP53-202ENST00000450251 PPP1R2P41236 205 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 PSMD2Q13200 908 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 PPP2R5EQ16537 467 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 KIAA0753Q2KHM9 967 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 SARM1Q6SZW1 724 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 RINLQ6ZS11 566 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 VPS36Q86VN1 386 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 BICD1Q96G01 975 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 CDCA7LQ96GN5 454 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 CCDC77Q9BR77 488 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 TXLNGQ9NUQ3 528 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 SEPT10Q9P0V9 454 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 SCHIP1Q9P0W5 487 aaPredicted RBP2.48□□□□□ -2.01
USP53-202ENST00000450251 ANGPTL2Q9UKU9 493 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 FAF1Q9UNN5 650 aaPredicted RBP2.48□□□□□ -2.01
USP53-202ENST00000450251 E7ENQ6 273 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 E2F6O75461 281 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 WDHD1O75717 1129 aaPredicted RBP2.48□□□□□ -2.01
USP53-202ENST00000450251 NEK2P51955 445 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 UBASH3AP57075 661 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 ETF1P62495 437 aaKnown RBP2.48□□□□□ -2.01
USP53-202ENST00000450251 LCE2DQ5TA82 110 aaPredicted RBP2.48□□□□□ -2.01
USP53-202ENST00000450251 PPP1R21Q6ZMI0 780 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 ARHGAP22Q7Z5H3 698 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 SRGAP1Q7Z6B7 1085 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 SESTD1Q86VW0 696 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 CCDC63Q8NA47 563 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 LMBR1Q8WVP7 490 aa2.48□□□□□ -2.01
USP53-202ENST00000450251 FGD4Q96M96 766 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms