RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 SPDYE2BA6NHP3 402 aa16.01■□□□□ 0.15
SNRNP27-203ENST00000450162 LDHBP07195 334 aaKnown RBP16.01■□□□□ 0.15
SNRNP27-203ENST00000450162 SPDYE6P0CI01 402 aa16.01■□□□□ 0.15
SNRNP27-203ENST00000450162 RBM5P52756 815 aaKnown RBP eCLIP16.01■□□□□ 0.15
SNRNP27-203ENST00000450162 ANGEL2Q5VTE6 544 aaKnown RBP16.01■□□□□ 0.15
SNRNP27-203ENST00000450162 AACSQ86V21 672 aa16.01■□□□□ 0.15
SNRNP27-203ENST00000450162 SLF2Q8IX21 1173 aa16.01■□□□□ 0.15
SNRNP27-203ENST00000450162 SPATA5Q8NB90 893 aa16.01■□□□□ 0.15
SNRNP27-203ENST00000450162 DBNDD2Q9BQY9 259 aa16.01■□□□□ 0.15
SNRNP27-203ENST00000450162 LRRCC1Q9C099 1032 aa16.01■□□□□ 0.15
SNRNP27-203ENST00000450162 DBNLQ9UJU6 430 aaKnown RBP16.01■□□□□ 0.15
SNRNP27-203ENST00000450162 PCDHB15Q9Y5E8 787 aa16.01■□□□□ 0.15
SNRNP27-203ENST00000450162 TMEM88BA6NKF7 163 aa16■□□□□ 0.15
SNRNP27-203ENST00000450162 IFIT2P09913 472 aaKnown RBP16■□□□□ 0.15
SNRNP27-203ENST00000450162 CRKP46108 304 aa16■□□□□ 0.15
SNRNP27-203ENST00000450162 USP48Q86UV5 1035 aa16■□□□□ 0.15
SNRNP27-203ENST00000450162 APOBEC3FQ8IUX4 373 aaKnown RBP16■□□□□ 0.15
SNRNP27-203ENST00000450162 GLIS2Q9BZE0 524 aaPredicted RBP16■□□□□ 0.15
SNRNP27-203ENST00000450162 CCDC8Q9H0W5 538 aaPredicted RBP16■□□□□ 0.15
SNRNP27-203ENST00000450162 HMG20BQ9P0W2 317 aa16■□□□□ 0.15
SNRNP27-203ENST00000450162 HDAC1Q13547 482 aaPredicted RBP15.99■□□□□ 0.15
SNRNP27-203ENST00000450162 PRMT6Q96LA8 375 aaPredicted RBP15.99■□□□□ 0.15
SNRNP27-203ENST00000450162 ZDHHC15Q96MV8 337 aa15.99■□□□□ 0.15
SNRNP27-203ENST00000450162 IL1RAPL2Q9NP60 686 aa15.99■□□□□ 0.15
SNRNP27-203ENST00000450162 APBB1O00213 710 aa15.98■□□□□ 0.15
SNRNP27-203ENST00000450162 MCAMP43121 646 aa15.98■□□□□ 0.15
SNRNP27-203ENST00000450162 TNFAIP1Q13829 316 aa15.98■□□□□ 0.15
SNRNP27-203ENST00000450162 ABCF2Q9UG63 623 aa15.98■□□□□ 0.15
SNRNP27-203ENST00000450162 PPP2R3BQ9Y5P8 575 aa15.98■□□□□ 0.15
SNRNP27-203ENST00000450162 COL1A1P02452 1464 aaPredicted RBP15.97■□□□□ 0.15
SNRNP27-203ENST00000450162 TRAF5O00463 557 aa15.97■□□□□ 0.15
SNRNP27-203ENST00000450162 PRDX5P30044 214 aa15.97■□□□□ 0.15
SNRNP27-203ENST00000450162 GRIK5Q16478 980 aa15.97■□□□□ 0.15
SNRNP27-203ENST00000450162 TMED8Q6PL24 325 aaPredicted RBP15.97■□□□□ 0.15
SNRNP27-203ENST00000450162 ERICH6Q7L0X2 663 aa15.97■□□□□ 0.15
SNRNP27-203ENST00000450162 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.97■□□□□ 0.15
SNRNP27-203ENST00000450162 GCC1Q96CN9 775 aa15.97■□□□□ 0.15
SNRNP27-203ENST00000450162 FAM163AQ96GL9 167 aaPredicted RBP15.97■□□□□ 0.15
SNRNP27-203ENST00000450162 FOXD4L1Q9NU39 408 aa15.97■□□□□ 0.15
SNRNP27-203ENST00000450162 ASTN2O75129 1339 aaPredicted RBP15.96■□□□□ 0.15
SNRNP27-203ENST00000450162 CELF2O95319 508 aaKnown RBP15.96■□□□□ 0.15
SNRNP27-203ENST00000450162 LDHCP07864 332 aa15.96■□□□□ 0.15
SNRNP27-203ENST00000450162 GSTO1P78417 241 aa15.96■□□□□ 0.15
SNRNP27-203ENST00000450162 SPDYE2Q495Y8 402 aa15.96■□□□□ 0.15
SNRNP27-203ENST00000450162 FKBP1CQ5VVH2 108 aa15.96■□□□□ 0.15
SNRNP27-203ENST00000450162 DZIP1Q86YF9 867 aaKnown RBP15.96■□□□□ 0.15
SNRNP27-203ENST00000450162 RWDD1Q9H446 243 aaPredicted RBP15.96■□□□□ 0.15
SNRNP27-203ENST00000450162 TLR7Q9NYK1 1049 aaKnown RBP15.96■□□□□ 0.15
SNRNP27-203ENST00000450162 TMOD2Q9NZR1 351 aa15.96■□□□□ 0.15
SNRNP27-203ENST00000450162 ADM5C9JUS6 153 aa15.95■□□□□ 0.14
SNRNP27-203ENST00000450162 MYCNP04198 464 aaPredicted RBP15.95■□□□□ 0.14
SNRNP27-203ENST00000450162 NF2P35240 595 aa15.95■□□□□ 0.14
SNRNP27-203ENST00000450162 TNNI2P48788 182 aa15.95■□□□□ 0.14
SNRNP27-203ENST00000450162 FKBP1BP68106 108 aa15.95■□□□□ 0.14
SNRNP27-203ENST00000450162 CST9Q5W186 159 aa15.95■□□□□ 0.14
SNRNP27-203ENST00000450162 APOBEC3HQ6NTF7 200 aaKnown RBP15.95■□□□□ 0.14
SNRNP27-203ENST00000450162 SAMD1Q6SPF0 538 aaPredicted RBP15.95■□□□□ 0.14
SNRNP27-203ENST00000450162 EXOC6Q8TAG9 804 aa15.95■□□□□ 0.14
SNRNP27-203ENST00000450162 LRP2BPQ9P2M1 347 aa15.95■□□□□ 0.14
SNRNP27-203ENST00000450162 ZNF70Q9UC06 446 aaPredicted RBP15.95■□□□□ 0.14
SNRNP27-203ENST00000450162 ZBTB47Q9UFB7 747 aaPredicted RBP15.95■□□□□ 0.14
SNRNP27-203ENST00000450162 MYH13Q9UKX3 1938 aa15.95■□□□□ 0.14
SNRNP27-203ENST00000450162 CAPN15O75808 1086 aa15.94■□□□□ 0.14
SNRNP27-203ENST00000450162 MAP4K4O95819 1239 aaPredicted RBP15.94■□□□□ 0.14
SNRNP27-203ENST00000450162 TTF1Q15361 905 aaPredicted RBP15.94■□□□□ 0.14
SNRNP27-203ENST00000450162 C2orf69Q8N8R5 385 aa15.94■□□□□ 0.14
SNRNP27-203ENST00000450162 CDCA5Q96FF9 252 aa15.94■□□□□ 0.14
SNRNP27-203ENST00000450162 HHIPL1Q96JK4 782 aa15.94■□□□□ 0.14
SNRNP27-203ENST00000450162 DEFB129Q9H1M3 183 aa15.94■□□□□ 0.14
SNRNP27-203ENST00000450162 TDRD3Q9H7E2 651 aaKnown RBP15.94■□□□□ 0.14
SNRNP27-203ENST00000450162 MECOMQ03112 1051 aa15.93■□□□□ 0.14
SNRNP27-203ENST00000450162 SUPT20HL1Q3ZLR7 823 aa15.93■□□□□ 0.14
SNRNP27-203ENST00000450162 PI16Q6UXB8 463 aa15.93■□□□□ 0.14
SNRNP27-203ENST00000450162 GPATCH3Q96I76 525 aa15.93■□□□□ 0.14
SNRNP27-203ENST00000450162 VEZTQ9HBM0 779 aa15.93■□□□□ 0.14
SNRNP27-203ENST00000450162 SNRKQ9NRH2 765 aa15.93■□□□□ 0.14
SNRNP27-203ENST00000450162 RAI14Q9P0K7 980 aa15.93■□□□□ 0.14
SNRNP27-203ENST00000450162 ABT1Q9ULW3 272 aaKnown RBP15.93■□□□□ 0.14
SNRNP27-203ENST00000450162 DAGLAQ9Y4D2 1042 aa15.93■□□□□ 0.14
SNRNP27-203ENST00000450162 PCDHAC2Q9Y5I4 1007 aa15.93■□□□□ 0.14
SNRNP27-203ENST00000450162 TLL2Q9Y6L7 1015 aa15.93■□□□□ 0.14
SNRNP27-203ENST00000450162 GAKO14976 1311 aa15.93■□□□□ 0.14
SNRNP27-203ENST00000450162 CLRN2A0PK11 232 aa15.92■□□□□ 0.14
SNRNP27-203ENST00000450162 RASSF10A6NK89 507 aa15.92■□□□□ 0.14
SNRNP27-203ENST00000450162 CYP2E1P05181 493 aaPredicted RBP15.92■□□□□ 0.14
SNRNP27-203ENST00000450162 ATP5JP18859 108 aa15.92■□□□□ 0.14
SNRNP27-203ENST00000450162 ZAP70P43403 619 aa15.92■□□□□ 0.14
SNRNP27-203ENST00000450162 FMR1Q06787 632 aaKnown RBP eCLIP15.92■□□□□ 0.14
SNRNP27-203ENST00000450162 DIXDC1Q155Q3 683 aa15.92■□□□□ 0.14
SNRNP27-203ENST00000450162 DEFB115Q30KQ5 88 aa15.92■□□□□ 0.14
SNRNP27-203ENST00000450162 TBC1D9Q6ZT07 1266 aa15.92■□□□□ 0.14
SNRNP27-203ENST00000450162 SAPCD2Q86UD0 394 aa15.92■□□□□ 0.14
SNRNP27-203ENST00000450162 FAM83AQ86UY5 434 aa15.92■□□□□ 0.14
SNRNP27-203ENST00000450162 DNAJC5GQ8N7S2 189 aa15.92■□□□□ 0.14
SNRNP27-203ENST00000450162 NSUN4Q96CB9 384 aaKnown RBP15.92■□□□□ 0.14
SNRNP27-203ENST00000450162 ZNF408Q9H9D4 720 aa15.92■□□□□ 0.14
SNRNP27-203ENST00000450162 GBA2Q9HCG7 927 aaPredicted RBP15.92■□□□□ 0.14
SNRNP27-203ENST00000450162 POLR2AP24928 1970 aaKnown RBP15.91■□□□□ 0.14
SNRNP27-203ENST00000450162 GPR75-ASB3A0A0A6YYF3 556 aa15.91■□□□□ 0.14
SNRNP27-203ENST00000450162 RASA3Q14644 834 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms