RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 ZNF70Q9UC06 446 aaPredicted RBP21.6■■□□□ 1.05
CLTCL1-203ENST00000449918 TRPA1O75762 1119 aa21.59■■□□□ 1.05
CLTCL1-203ENST00000449918 ATP2B3Q16720 1220 aa21.59■■□□□ 1.05
CLTCL1-203ENST00000449918 LDLRAD1Q5T700 205 aa21.59■■□□□ 1.05
CLTCL1-203ENST00000449918 MRIQ9BWK5 157 aa21.59■■□□□ 1.05
CLTCL1-203ENST00000449918 TDRD3Q9H7E2 651 aaKnown RBP21.59■■□□□ 1.05
CLTCL1-203ENST00000449918 GNL3LQ9NVN8 582 aaKnown RBP21.59■■□□□ 1.05
CLTCL1-203ENST00000449918 MAST3O60307 1309 aa21.58■■□□□ 1.05
CLTCL1-203ENST00000449918 WDR66Q8TBY9 1149 aa21.58■■□□□ 1.05
CLTCL1-203ENST00000449918 TEKT1Q969V4 418 aa21.58■■□□□ 1.05
CLTCL1-203ENST00000449918 AOX1Q06278 1338 aa21.57■■□□□ 1.04
CLTCL1-203ENST00000449918 UNCXA6NJT0 531 aa21.57■■□□□ 1.04
CLTCL1-203ENST00000449918 SRGAP3O43295 1099 aa21.57■■□□□ 1.04
CLTCL1-203ENST00000449918 GRIK5Q16478 980 aa21.57■■□□□ 1.04
CLTCL1-203ENST00000449918 MAP3K11Q16584 847 aa21.57■■□□□ 1.04
CLTCL1-203ENST00000449918 SLC10A4Q96EP9 437 aa21.57■■□□□ 1.04
CLTCL1-203ENST00000449918 PA2G4Q9UQ80 394 aaKnown RBP21.57■■□□□ 1.04
CLTCL1-203ENST00000449918 GNAI2P04899 355 aa21.56■■□□□ 1.04
CLTCL1-203ENST00000449918 TNNI2P48788 182 aa21.56■■□□□ 1.04
CLTCL1-203ENST00000449918 NBPF12Q5TAG4 269 aaPredicted RBP21.56■■□□□ 1.04
CLTCL1-203ENST00000449918 ZKSCAN2Q63HK3 967 aa21.56■■□□□ 1.04
CLTCL1-203ENST00000449918 CLUAP1Q96AJ1 413 aa21.56■■□□□ 1.04
CLTCL1-203ENST00000449918 ABHD8Q96I13 439 aa21.56■■□□□ 1.04
CLTCL1-203ENST00000449918 ZDHHC15Q96MV8 337 aa21.56■■□□□ 1.04
CLTCL1-203ENST00000449918 IREB2P48200 963 aaKnown RBP21.55■■□□□ 1.04
CLTCL1-203ENST00000449918 TM4SF4P48230 202 aa21.55■■□□□ 1.04
CLTCL1-203ENST00000449918 SREBF2Q12772 1141 aa21.55■■□□□ 1.04
CLTCL1-203ENST00000449918 MTX1Q13505 466 aa21.55■■□□□ 1.04
CLTCL1-203ENST00000449918 TCP10L2B9ZVM9 353 aa21.54■■□□□ 1.04
CLTCL1-203ENST00000449918 MKRN3Q13064 507 aaKnown RBP21.54■■□□□ 1.04
CLTCL1-203ENST00000449918 SPRYD7Q5W111 196 aa21.54■■□□□ 1.04
CLTCL1-203ENST00000449918 TMOD2Q9NZR1 351 aa21.54■■□□□ 1.04
CLTCL1-203ENST00000449918 FZD1Q9UP38 647 aa21.54■■□□□ 1.04
CLTCL1-203ENST00000449918 SEMA3EO15041 775 aa21.53■■□□□ 1.04
CLTCL1-203ENST00000449918 HHIPL2Q6UWX4 724 aa21.53■■□□□ 1.04
CLTCL1-203ENST00000449918 AKAP2Q9Y2D5 859 aa21.53■■□□□ 1.04
CLTCL1-203ENST00000449918 USP2O75604 605 aaPredicted RBP21.52■■□□□ 1.04
CLTCL1-203ENST00000449918 DENND2AQ9ULE3 1009 aa21.52■■□□□ 1.04
CLTCL1-203ENST00000449918 TNNQ9UQP3 1299 aa21.52■■□□□ 1.04
CLTCL1-203ENST00000449918 ECM29Q5VYK3 1845 aa21.52■■□□□ 1.04
CLTCL1-203ENST00000449918 INHBEP58166 350 aa21.51■■□□□ 1.03
CLTCL1-203ENST00000449918 ANKRD13AQ8IZ07 590 aa21.51■■□□□ 1.03
CLTCL1-203ENST00000449918 TMEM57Q8N5G2 664 aa21.51■■□□□ 1.03
CLTCL1-203ENST00000449918 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.51■■□□□ 1.03
CLTCL1-203ENST00000449918 SSC5DA1L4H1 1573 aa21.51■■□□□ 1.03
CLTCL1-203ENST00000449918 ZBED9Q6R2W3 1325 aa21.51■■□□□ 1.03
CLTCL1-203ENST00000449918 ARAP2Q8WZ64 1704 aa21.5■■□□□ 1.03
CLTCL1-203ENST00000449918 MANSC4A6NHS7 340 aaPredicted RBP21.5■■□□□ 1.03
CLTCL1-203ENST00000449918 ZBTB22O15209 634 aa21.5■■□□□ 1.03
CLTCL1-203ENST00000449918 ZBTB48P10074 688 aaPredicted RBP21.5■■□□□ 1.03
CLTCL1-203ENST00000449918 DGKZQ13574 1117 aa21.5■■□□□ 1.03
CLTCL1-203ENST00000449918 FKBP1CQ5VVH2 108 aa21.5■■□□□ 1.03
CLTCL1-203ENST00000449918 APOBEC3HQ6NTF7 200 aaKnown RBP21.5■■□□□ 1.03
CLTCL1-203ENST00000449918 FTSJ3Q8IY81 847 aaKnown RBP21.5■■□□□ 1.03
CLTCL1-203ENST00000449918 CLMNQ96JQ2 1002 aa21.5■■□□□ 1.03
CLTCL1-203ENST00000449918 TEPSINQ96N21 525 aa21.5■■□□□ 1.03
CLTCL1-203ENST00000449918 MCOLN1Q9GZU1 580 aa21.5■■□□□ 1.03
CLTCL1-203ENST00000449918 TMEM39BQ9GZU3 492 aa21.5■■□□□ 1.03
CLTCL1-203ENST00000449918 LDHBP07195 334 aaKnown RBP21.49■■□□□ 1.03
CLTCL1-203ENST00000449918 PHKA1P46020 1223 aa21.49■■□□□ 1.03
CLTCL1-203ENST00000449918 TIMM10P62072 90 aa21.49■■□□□ 1.03
CLTCL1-203ENST00000449918 TFCP2Q12800 502 aa21.49■■□□□ 1.03
CLTCL1-203ENST00000449918 CCDC102BQ68D86 513 aa21.49■■□□□ 1.03
CLTCL1-203ENST00000449918 ZGPATQ8N5A5 531 aaKnown RBP21.49■■□□□ 1.03
CLTCL1-203ENST00000449918 WNK4Q96J92 1243 aa21.49■■□□□ 1.03
CLTCL1-203ENST00000449918 SALL1Q9NSC2 1324 aa21.49■■□□□ 1.03
CLTCL1-203ENST00000449918 AKAP11Q9UKA4 1901 aa21.49■■□□□ 1.03
CLTCL1-203ENST00000449918 ALDH1A1P00352 501 aa21.48■■□□□ 1.03
CLTCL1-203ENST00000449918 FAM83AQ86UY5 434 aa21.48■■□□□ 1.03
CLTCL1-203ENST00000449918 HOOK2Q96ED9 719 aa21.48■■□□□ 1.03
CLTCL1-203ENST00000449918 CASP8AP2Q9UKL3 1982 aa21.48■■□□□ 1.03
CLTCL1-203ENST00000449918 A0A1B0GUL7 405 aa21.47■■□□□ 1.03
CLTCL1-203ENST00000449918 TBC1D8O95759 1140 aa21.47■■□□□ 1.03
CLTCL1-203ENST00000449918 ADORA1P30542 326 aa21.47■■□□□ 1.03
CLTCL1-203ENST00000449918 CACNB3P54284 484 aa21.47■■□□□ 1.03
CLTCL1-203ENST00000449918 G3BP1Q13283 466 aaKnown RBP eCLIP21.47■■□□□ 1.03
CLTCL1-203ENST00000449918 MVPQ14764 893 aaKnown RBP21.47■■□□□ 1.03
CLTCL1-203ENST00000449918 XAGE2Q96GT9 111 aa21.47■■□□□ 1.03
CLTCL1-203ENST00000449918 PNMA6EA0A0J9YXQ4 647 aa21.46■■□□□ 1.03
CLTCL1-203ENST00000449918 CCDC85CA6NKD9 419 aa21.46■■□□□ 1.03
CLTCL1-203ENST00000449918 PRDX5P30044 214 aa21.46■■□□□ 1.03
CLTCL1-203ENST00000449918 CDAN1Q8IWY9 1227 aa21.46■■□□□ 1.03
CLTCL1-203ENST00000449918 NEUROD6Q96NK8 337 aa21.46■■□□□ 1.03
CLTCL1-203ENST00000449918 MAP3K9P80192 1104 aa21.45■■□□□ 1.02
CLTCL1-203ENST00000449918 NOM1Q5C9Z4 860 aaKnown RBP21.45■■□□□ 1.02
CLTCL1-203ENST00000449918 DAGLAQ9Y4D2 1042 aa21.45■■□□□ 1.02
CLTCL1-203ENST00000449918 DIXDC1Q155Q3 683 aa21.44■■□□□ 1.02
CLTCL1-203ENST00000449918 GORABQ5T7V8 394 aa21.44■■□□□ 1.02
CLTCL1-203ENST00000449918 OTUD7BQ6GQQ9 843 aa21.44■■□□□ 1.02
CLTCL1-203ENST00000449918 IFNL1Q8IU54 200 aa21.44■■□□□ 1.02
CLTCL1-203ENST00000449918 ITPRIPQ8IWB1 547 aa21.44■■□□□ 1.02
CLTCL1-203ENST00000449918 CFHR5Q9BXR6 569 aa21.44■■□□□ 1.02
CLTCL1-203ENST00000449918 CSADQ9Y600 493 aa21.44■■□□□ 1.02
CLTCL1-203ENST00000449918 PDS5AQ29RF7 1337 aaKnown RBP21.44■■□□□ 1.02
CLTCL1-203ENST00000449918 RASGRF1Q13972 1273 aa21.43■■□□□ 1.02
CLTCL1-203ENST00000449918 SPTY2D1Q68D10 685 aaPredicted RBP21.43■■□□□ 1.02
CLTCL1-203ENST00000449918 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.43■■□□□ 1.02
CLTCL1-203ENST00000449918 CTU1Q7Z7A3 348 aaKnown RBP21.43■■□□□ 1.02
CLTCL1-203ENST00000449918 SLF2Q8IX21 1173 aa21.43■■□□□ 1.02
CLTCL1-203ENST00000449918 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms