RNA–Protein interactions for RNA: ENST00000448502.5

UBE2F-217, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 4

Gene UBE2F, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-217ENST00000448502 FBXO46Q6PJ61 603 aaPredicted RBP25.54■■□□□ 1.68
UBE2F-217ENST00000448502 VGLL2Q8N8G2 317 aa25.54■■□□□ 1.68
UBE2F-217ENST00000448502 TEPSINQ96N21 525 aa25.54■■□□□ 1.68
UBE2F-217ENST00000448502 PTPRCP08575 1304 aa25.54■■□□□ 1.68
UBE2F-217ENST00000448502 METTL24Q5JXM2 366 aa25.53■■□□□ 1.68
UBE2F-217ENST00000448502 ANKRD13AQ8IZ07 590 aa25.53■■□□□ 1.68
UBE2F-217ENST00000448502 KLHDC4Q8TBB5 520 aa25.53■■□□□ 1.68
UBE2F-217ENST00000448502 SSH1Q8WYL5 1049 aa25.53■■□□□ 1.68
UBE2F-217ENST00000448502 VPS37DQ86XT2 251 aa25.52■■□□□ 1.68
UBE2F-217ENST00000448502 USP44Q9H0E7 712 aa25.52■■□□□ 1.68
UBE2F-217ENST00000448502 CENPFP49454 3210 aa25.52■■□□□ 1.68
UBE2F-217ENST00000448502 PDE8BO95263 885 aa25.51■■□□□ 1.67
UBE2F-217ENST00000448502 CHAF1AQ13111 956 aaPredicted RBP25.51■■□□□ 1.67
UBE2F-217ENST00000448502 TCP10L2B9ZVM9 353 aa25.5■■□□□ 1.67
UBE2F-217ENST00000448502 E9PSI1 815 aa25.5■■□□□ 1.67
UBE2F-217ENST00000448502 TMEM39BQ9GZU3 492 aa25.5■■□□□ 1.67
UBE2F-217ENST00000448502 CAVIN4Q5BKX8 364 aa25.49■■□□□ 1.67
UBE2F-217ENST00000448502 PTPN18Q99952 460 aa25.49■■□□□ 1.67
UBE2F-217ENST00000448502 ELP3Q9H9T3 547 aa25.49■■□□□ 1.67
UBE2F-217ENST00000448502 BCAMP50895 628 aa25.48■■□□□ 1.67
UBE2F-217ENST00000448502 SLFN5Q08AF3 891 aa25.48■■□□□ 1.67
UBE2F-217ENST00000448502 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.48■■□□□ 1.67
UBE2F-217ENST00000448502 TBC1D22AQ8WUA7 517 aa25.48■■□□□ 1.67
UBE2F-217ENST00000448502 TESPA1A2RU30 521 aaPredicted RBP25.47■■□□□ 1.67
UBE2F-217ENST00000448502 FRAT2O75474 233 aaPredicted RBP25.47■■□□□ 1.67
UBE2F-217ENST00000448502 HDLBPQ00341 1268 aaKnown RBP25.47■■□□□ 1.67
UBE2F-217ENST00000448502 CRHR2Q13324 411 aa25.47■■□□□ 1.67
UBE2F-217ENST00000448502 OPTNQ96CV9 577 aa25.47■■□□□ 1.67
UBE2F-217ENST00000448502 FGFR2P21802 821 aa25.46■■□□□ 1.67
UBE2F-217ENST00000448502 RFX5P48382 616 aaPredicted RBP25.46■■□□□ 1.67
UBE2F-217ENST00000448502 OTOP1Q7RTM1 612 aa25.46■■□□□ 1.67
UBE2F-217ENST00000448502 CNKSR2Q8WXI2 1034 aa25.46■■□□□ 1.67
UBE2F-217ENST00000448502 TRIM17Q9Y577 477 aa25.46■■□□□ 1.67
UBE2F-217ENST00000448502 MYH13Q9UKX3 1938 aa25.45■■□□□ 1.67
UBE2F-217ENST00000448502 TNNI2P48788 182 aa25.45■■□□□ 1.66
UBE2F-217ENST00000448502 CACNB3P54284 484 aa25.45■■□□□ 1.66
UBE2F-217ENST00000448502 TEKT1Q969V4 418 aa25.45■■□□□ 1.66
UBE2F-217ENST00000448502 MS4A4AQ96JQ5 239 aa25.45■■□□□ 1.66
UBE2F-217ENST00000448502 KIF16BQ96L93 1317 aa25.44■■□□□ 1.66
UBE2F-217ENST00000448502 MKI67P46013 3256 aaKnown RBP25.44■■□□□ 1.66
UBE2F-217ENST00000448502 VGLL4Q14135 290 aa25.44■■□□□ 1.66
UBE2F-217ENST00000448502 PUM3Q15397 648 aaKnown RBP25.44■■□□□ 1.66
UBE2F-217ENST00000448502 OTUD7BQ6GQQ9 843 aa25.44■■□□□ 1.66
UBE2F-217ENST00000448502 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.44■■□□□ 1.66
UBE2F-217ENST00000448502 MAP3K9P80192 1104 aa25.43■■□□□ 1.66
UBE2F-217ENST00000448502 CDCA7LQ96GN5 454 aa25.43■■□□□ 1.66
UBE2F-217ENST00000448502 ZDHHC15Q96MV8 337 aa25.43■■□□□ 1.66
UBE2F-217ENST00000448502 EYA2O00167 538 aa25.42■■□□□ 1.66
UBE2F-217ENST00000448502 IFIT1P09914 478 aaKnown RBP25.42■■□□□ 1.66
UBE2F-217ENST00000448502 ALDH1L2Q3SY69 923 aa25.42■■□□□ 1.66
UBE2F-217ENST00000448502 APOBEC3HQ6NTF7 200 aaKnown RBP25.42■■□□□ 1.66
UBE2F-217ENST00000448502 CD99L2Q8TCZ2 262 aa25.42■■□□□ 1.66
UBE2F-217ENST00000448502 BRI3BPQ8WY22 251 aa25.42■■□□□ 1.66
UBE2F-217ENST00000448502 MRIQ9BWK5 157 aa25.42■■□□□ 1.66
UBE2F-217ENST00000448502 KIAA0100Q14667 2235 aaKnown RBP25.41■■□□□ 1.66
UBE2F-217ENST00000448502 CAP1Q01518 475 aa25.41■■□□□ 1.66
UBE2F-217ENST00000448502 ERO1AQ96HE7 468 aa25.41■■□□□ 1.66
UBE2F-217ENST00000448502 BRCA2P51587 3418 aa25.4■■□□□ 1.66
UBE2F-217ENST00000448502 ATG9AQ7Z3C6 839 aa25.4■■□□□ 1.66
UBE2F-217ENST00000448502 SMC4Q9NTJ3 1288 aa25.4■■□□□ 1.66
UBE2F-217ENST00000448502 SUGT1Q9Y2Z0 365 aa25.4■■□□□ 1.66
UBE2F-217ENST00000448502 FAM83AQ86UY5 434 aa25.39■■□□□ 1.66
UBE2F-217ENST00000448502 OTUD5Q96G74 571 aa25.39■■□□□ 1.66
UBE2F-217ENST00000448502 CSADQ9Y600 493 aa25.39■■□□□ 1.66
UBE2F-217ENST00000448502 MAST3O60307 1309 aa25.38■■□□□ 1.65
UBE2F-217ENST00000448502 CCL15-CCL14A0A0B4J2E2 113 aa25.38■■□□□ 1.65
UBE2F-217ENST00000448502 SP3Q02447 781 aa25.38■■□□□ 1.65
UBE2F-217ENST00000448502 CCL15Q16663 113 aa25.38■■□□□ 1.65
UBE2F-217ENST00000448502 FKBP1CQ5VVH2 108 aa25.38■■□□□ 1.65
UBE2F-217ENST00000448502 HHIPL2Q6UWX4 724 aa25.38■■□□□ 1.65
UBE2F-217ENST00000448502 TRMT2AQ8IZ69 625 aaKnown RBP25.38■■□□□ 1.65
UBE2F-217ENST00000448502 LPIN2Q92539 896 aa25.38■■□□□ 1.65
UBE2F-217ENST00000448502 TMOD2Q9NZR1 351 aa25.38■■□□□ 1.65
UBE2F-217ENST00000448502 PTPN22Q9Y2R2 807 aa25.38■■□□□ 1.65
UBE2F-217ENST00000448502 SPDYE5A6NIY4 337 aa25.37■■□□□ 1.65
UBE2F-217ENST00000448502 SLC5A1P13866 664 aa25.37■■□□□ 1.65
UBE2F-217ENST00000448502 GTF2A2P52657 109 aa25.37■■□□□ 1.65
UBE2F-217ENST00000448502 PRPF38BQ5VTL8 546 aaKnown RBP25.37■■□□□ 1.65
UBE2F-217ENST00000448502 SNCAIPQ9Y6H5 919 aa25.37■■□□□ 1.65
UBE2F-217ENST00000448502 FAM43AQ8N2R8 423 aa25.36■■□□□ 1.65
UBE2F-217ENST00000448502 EFCC1Q9HA90 598 aa25.36■■□□□ 1.65
UBE2F-217ENST00000448502 RPAP1Q9BWH6 1393 aaPredicted RBP25.35■■□□□ 1.65
UBE2F-217ENST00000448502 TAF1CQ15572 869 aaPredicted RBP25.35■■□□□ 1.65
UBE2F-217ENST00000448502 WDR66Q8TBY9 1149 aa25.35■■□□□ 1.65
UBE2F-217ENST00000448502 ZKSCAN4Q969J2 545 aaPredicted RBP25.35■■□□□ 1.65
UBE2F-217ENST00000448502 WRNIP1Q96S55 665 aa25.35■■□□□ 1.65
UBE2F-217ENST00000448502 SIL1Q9H173 461 aa25.35■■□□□ 1.65
UBE2F-217ENST00000448502 RBBP6Q7Z6E9 1792 aaKnown RBP25.35■■□□□ 1.65
UBE2F-217ENST00000448502 UBTFL1P0CB47 393 aaPredicted RBP25.34■■□□□ 1.65
UBE2F-217ENST00000448502 POTEFA5A3E0 1075 aa25.33■■□□□ 1.65
UBE2F-217ENST00000448502 CCER2I3L3R5 266 aa25.33■■□□□ 1.65
UBE2F-217ENST00000448502 DIEXFQ68CQ4 756 aaKnown RBP25.33■■□□□ 1.65
UBE2F-217ENST00000448502 INTS3Q68E01 1043 aaKnown RBP25.33■■□□□ 1.65
UBE2F-217ENST00000448502 ERO1BQ86YB8 467 aa25.33■■□□□ 1.65
UBE2F-217ENST00000448502 ZFYVE28Q9HCC9 887 aa25.33■■□□□ 1.65
UBE2F-217ENST00000448502 NOB1Q9ULX3 412 aaKnown RBP25.33■■□□□ 1.65
UBE2F-217ENST00000448502 CIAO1O76071 339 aa25.32■■□□□ 1.64
UBE2F-217ENST00000448502 DIXDC1Q155Q3 683 aa25.32■■□□□ 1.64
UBE2F-217ENST00000448502 ATP2B3Q16720 1220 aa25.32■■□□□ 1.64
UBE2F-217ENST00000448502 MIER1Q8N108 512 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms