RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 BCL11BQ9C0K0 894 aaPredicted RBP19.08■□□□□ 0.65
OTUB1-204ENST00000447683 KCNQ2O43526 872 aa19.08■□□□□ 0.64
OTUB1-204ENST00000447683 IGHMBP2P38935 993 aaKnown RBP19.08■□□□□ 0.64
OTUB1-204ENST00000447683 CLEC4GQ6UXB4 293 aa19.08■□□□□ 0.64
OTUB1-204ENST00000447683 TBC1D10CQ8IV04 446 aa19.08■□□□□ 0.64
OTUB1-204ENST00000447683 CLSTN2Q9H4D0 955 aa19.08■□□□□ 0.64
OTUB1-204ENST00000447683 ZNF652Q9Y2D9 606 aa19.08■□□□□ 0.64
OTUB1-204ENST00000447683 A0A1B0GUL6 1792 aa19.07■□□□□ 0.64
OTUB1-204ENST00000447683 CASZ1Q86V15 1759 aa19.07■□□□□ 0.64
OTUB1-204ENST00000447683 SNAP23O00161 211 aa19.07■□□□□ 0.64
OTUB1-204ENST00000447683 TRDNQ13061 729 aa19.07■□□□□ 0.64
OTUB1-204ENST00000447683 USP25Q9UHP3 1055 aa19.07■□□□□ 0.64
OTUB1-204ENST00000447683 ZNF500O60304 480 aaPredicted RBP19.07■□□□□ 0.64
OTUB1-204ENST00000447683 KDM4AO75164 1064 aa19.07■□□□□ 0.64
OTUB1-204ENST00000447683 MAP3K12Q12852 859 aa19.07■□□□□ 0.64
OTUB1-204ENST00000447683 TNMDQ9H2S6 317 aa19.07■□□□□ 0.64
OTUB1-204ENST00000447683 GOLGA8BA8MQT2 603 aa19.06■□□□□ 0.64
OTUB1-204ENST00000447683 FOSBP53539 338 aa19.06■□□□□ 0.64
OTUB1-204ENST00000447683 ILDR1Q86SU0 546 aaPredicted RBP19.06■□□□□ 0.64
OTUB1-204ENST00000447683 AIDAQ96BJ3 306 aa19.06■□□□□ 0.64
OTUB1-204ENST00000447683 ZNF396Q96N95 335 aaPredicted RBP19.06■□□□□ 0.64
OTUB1-204ENST00000447683 BCL9LQ86UU0 1499 aa19.06■□□□□ 0.64
OTUB1-204ENST00000447683 NR1I2O75469 434 aa19.06■□□□□ 0.64
OTUB1-204ENST00000447683 RGS22Q8NE09 1264 aa19.06■□□□□ 0.64
OTUB1-204ENST00000447683 BICD2Q8TD16 824 aa19.06■□□□□ 0.64
OTUB1-204ENST00000447683 COL4A1P02462 1669 aa19.05■□□□□ 0.64
OTUB1-204ENST00000447683 PATL2C9JE40 543 aaKnown RBP19.05■□□□□ 0.64
OTUB1-204ENST00000447683 APPP05067 770 aa19.05■□□□□ 0.64
OTUB1-204ENST00000447683 CAMK4Q16566 473 aa19.05■□□□□ 0.64
OTUB1-204ENST00000447683 USP28Q96RU2 1077 aa19.05■□□□□ 0.64
OTUB1-204ENST00000447683 TYRO3Q06418 890 aa19.05■□□□□ 0.64
OTUB1-204ENST00000447683 CYB5R4Q7L1T6 521 aa19.05■□□□□ 0.64
OTUB1-204ENST00000447683 SMAP1Q8IYB5 467 aaPredicted RBP19.05■□□□□ 0.64
OTUB1-204ENST00000447683 MAGEB6Q8N7X4 407 aa19.05■□□□□ 0.64
OTUB1-204ENST00000447683 DENND2AQ9ULE3 1009 aa19.05■□□□□ 0.64
OTUB1-204ENST00000447683 ANGEL1Q9UNK9 670 aaKnown RBP19.05■□□□□ 0.64
OTUB1-204ENST00000447683 MRVI1Q9Y6F6 885 aa19.05■□□□□ 0.64
OTUB1-204ENST00000447683 TIAM2Q8IVF5 1701 aa19.04■□□□□ 0.64
OTUB1-204ENST00000447683 SH2B2O14492 632 aaPredicted RBP19.04■□□□□ 0.64
OTUB1-204ENST00000447683 RGL2O15211 777 aa19.04■□□□□ 0.64
OTUB1-204ENST00000447683 ADCY5O95622 1261 aa19.04■□□□□ 0.64
OTUB1-204ENST00000447683 TERF1P54274 439 aa19.04■□□□□ 0.64
OTUB1-204ENST00000447683 GUCY1B3Q02153 619 aa19.04■□□□□ 0.64
OTUB1-204ENST00000447683 CHRNDQ07001 517 aa19.04■□□□□ 0.64
OTUB1-204ENST00000447683 NKX2-3Q8TAU0 364 aa19.04■□□□□ 0.64
OTUB1-204ENST00000447683 PPFIA3O75145 1194 aa19.03■□□□□ 0.64
OTUB1-204ENST00000447683 BCAMP50895 628 aa19.03■□□□□ 0.64
OTUB1-204ENST00000447683 LINC00116Q8NCU8 138 aa19.03■□□□□ 0.64
OTUB1-204ENST00000447683 EPB41L4AQ9HCS5 686 aaPredicted RBP19.03■□□□□ 0.64
OTUB1-204ENST00000447683 ORC3Q9UBD5 711 aaPredicted RBP19.03■□□□□ 0.64
OTUB1-204ENST00000447683 IFNL3Q8IZI9 196 aa19.03■□□□□ 0.64
OTUB1-204ENST00000447683 FBXO18Q8NFZ0 1043 aa19.03■□□□□ 0.64
OTUB1-204ENST00000447683 FAM200AQ8TCP9 573 aa19.03■□□□□ 0.64
OTUB1-204ENST00000447683 TMEM87BQ96K49 555 aa19.03■□□□□ 0.64
OTUB1-204ENST00000447683 CDC5LQ99459 802 aaKnown RBP19.03■□□□□ 0.64
OTUB1-204ENST00000447683 SCN7AQ01118 1682 aa19.03■□□□□ 0.64
OTUB1-204ENST00000447683 MBD4O95243 580 aa19.02■□□□□ 0.64
OTUB1-204ENST00000447683 SF3B3Q15393 1217 aaKnown RBP19.02■□□□□ 0.64
OTUB1-204ENST00000447683 C8orf76Q96K31 380 aa19.02■□□□□ 0.64
OTUB1-204ENST00000447683 FTOQ9C0B1 505 aaKnown RBP eCLIP19.02■□□□□ 0.64
OTUB1-204ENST00000447683 TOM1O60784 492 aa19.02■□□□□ 0.64
OTUB1-204ENST00000447683 TAF1P21675 1872 aa19.02■□□□□ 0.64
OTUB1-204ENST00000447683 CEBPZQ03701 1054 aaKnown RBP19.02■□□□□ 0.64
OTUB1-204ENST00000447683 PNPLA7Q6ZV29 1317 aa19.02■□□□□ 0.64
OTUB1-204ENST00000447683 CKAP2LQ8IYA6 745 aa19.02■□□□□ 0.64
OTUB1-204ENST00000447683 CNTNAP4Q9C0A0 1308 aa19.02■□□□□ 0.64
OTUB1-204ENST00000447683 NEDD4P46934 1319 aa19.01■□□□□ 0.63
OTUB1-204ENST00000447683 B4E1Z4 1266 aa19.01■□□□□ 0.63
OTUB1-204ENST00000447683 CPLX1O14810 134 aa19.01■□□□□ 0.63
OTUB1-204ENST00000447683 PTMAP06454 111 aaKnown RBP19.01■□□□□ 0.63
OTUB1-204ENST00000447683 IGDCC4Q8TDY8 1250 aa19.01■□□□□ 0.63
OTUB1-204ENST00000447683 ZNF804BA4D1E1 1349 aa19.01■□□□□ 0.63
OTUB1-204ENST00000447683 GSG1L2A8MUP6 293 aa19.01■□□□□ 0.63
OTUB1-204ENST00000447683 OFD1O75665 1012 aa19.01■□□□□ 0.63
OTUB1-204ENST00000447683 VPS72Q15906 364 aa19.01■□□□□ 0.63
OTUB1-204ENST00000447683 FAM98CQ17RN3 349 aaKnown RBP19.01■□□□□ 0.63
OTUB1-204ENST00000447683 ERFEQ4G0M1 354 aa19.01■□□□□ 0.63
OTUB1-204ENST00000447683 NAPBQ9H115 298 aa19.01■□□□□ 0.63
OTUB1-204ENST00000447683 ARMT1Q9H993 441 aa19.01■□□□□ 0.63
OTUB1-204ENST00000447683 RTEL1Q9NZ71 1219 aa19.01■□□□□ 0.63
OTUB1-204ENST00000447683 AP5Z1O43299 807 aa19■□□□□ 0.63
OTUB1-204ENST00000447683 GNAT2P19087 354 aa19■□□□□ 0.63
OTUB1-204ENST00000447683 SGMS1Q86VZ5 419 aa19■□□□□ 0.63
OTUB1-204ENST00000447683 PIP4K2BP78356 416 aa19■□□□□ 0.63
OTUB1-204ENST00000447683 APOA5Q6Q788 366 aa19■□□□□ 0.63
OTUB1-204ENST00000447683 RAB11FIP4Q86YS3 637 aa19■□□□□ 0.63
OTUB1-204ENST00000447683 CCAR1Q8IX12 1150 aaKnown RBP19■□□□□ 0.63
OTUB1-204ENST00000447683 ECM29Q5VYK3 1845 aa19■□□□□ 0.63
OTUB1-204ENST00000447683 OTUD7BQ6GQQ9 843 aa18.99■□□□□ 0.63
OTUB1-204ENST00000447683 BRAPQ7Z569 592 aa18.99■□□□□ 0.63
OTUB1-204ENST00000447683 MTERF4Q7Z6M4 381 aaKnown RBP18.99■□□□□ 0.63
OTUB1-204ENST00000447683 SLC10A5Q5PT55 438 aa18.99■□□□□ 0.63
OTUB1-204ENST00000447683 C3orf67Q6ZVT6 689 aa18.99■□□□□ 0.63
OTUB1-204ENST00000447683 ANKRD18AQ8IVF6 992 aa18.99■□□□□ 0.63
OTUB1-204ENST00000447683 ENGASEQ8NFI3 743 aa18.99■□□□□ 0.63
OTUB1-204ENST00000447683 GOLPH3LQ9H4A5 285 aa18.99■□□□□ 0.63
OTUB1-204ENST00000447683 LY9Q9HBG7 655 aa18.99■□□□□ 0.63
OTUB1-204ENST00000447683 BSDC1Q9NW68 430 aaPredicted RBP18.99■□□□□ 0.63
OTUB1-204ENST00000447683 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.99■□□□□ 0.63
OTUB1-204ENST00000447683 CTAGE5O15320 804 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms