RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 LTBP4Q8N2S1 1624 aa22.07■■□□□ 1.12
HMGA1-205ENST00000447654 MICALL1Q8N3F8 863 aa22.06■■□□□ 1.12
HMGA1-205ENST00000447654 DBF4Q9UBU7 674 aaPredicted RBP22.06■■□□□ 1.12
HMGA1-205ENST00000447654 L1RE1Q9UN81 338 aa22.06■■□□□ 1.12
HMGA1-205ENST00000447654 FANCGO15287 622 aa22.06■■□□□ 1.12
HMGA1-205ENST00000447654 PHKG2P15735 406 aa22.06■■□□□ 1.12
HMGA1-205ENST00000447654 ZKSCAN1P17029 563 aaPredicted RBP22.06■■□□□ 1.12
HMGA1-205ENST00000447654 RESTQ13127 1097 aa22.06■■□□□ 1.12
HMGA1-205ENST00000447654 BRINP3Q76B58 766 aa22.06■■□□□ 1.12
HMGA1-205ENST00000447654 POTEDQ86YR6 584 aa22.06■■□□□ 1.12
HMGA1-205ENST00000447654 FAN1Q9Y2M0 1017 aa22.06■■□□□ 1.12
HMGA1-205ENST00000447654 MNAT1P51948 309 aa22.05■■□□□ 1.12
HMGA1-205ENST00000447654 SETQ01105 290 aaPredicted RBP22.05■■□□□ 1.12
HMGA1-205ENST00000447654 FAM160A1Q05DH4 1040 aa22.05■■□□□ 1.12
HMGA1-205ENST00000447654 RCOR1Q9UKL0 485 aa22.05■■□□□ 1.12
HMGA1-205ENST00000447654 TPCN1Q9ULQ1 816 aa22.05■■□□□ 1.12
HMGA1-205ENST00000447654 ARHGAP6O43182 974 aa22.05■■□□□ 1.12
HMGA1-205ENST00000447654 CSB-PGBD3P0DP91 1061 aa22.05■■□□□ 1.12
HMGA1-205ENST00000447654 PDIA6Q15084 440 aa22.05■■□□□ 1.12
HMGA1-205ENST00000447654 SYTL4Q96C24 671 aaPredicted RBP22.05■■□□□ 1.12
HMGA1-205ENST00000447654 IL1RAPL2Q9NP60 686 aa22.05■■□□□ 1.12
HMGA1-205ENST00000447654 IFNKQ9P0W0 207 aa22.05■■□□□ 1.12
HMGA1-205ENST00000447654 POLA2Q14181 598 aa22.04■■□□□ 1.12
HMGA1-205ENST00000447654 CNNM3Q8NE01 707 aa22.04■■□□□ 1.12
HMGA1-205ENST00000447654 PI4K2BQ8TCG2 481 aa22.04■■□□□ 1.12
HMGA1-205ENST00000447654 TBC1D22AQ8WUA7 517 aa22.04■■□□□ 1.12
HMGA1-205ENST00000447654 MAP3K2Q9Y2U5 619 aa22.04■■□□□ 1.12
HMGA1-205ENST00000447654 VWA3AA6NCI4 1184 aa22.04■■□□□ 1.12
HMGA1-205ENST00000447654 CYP27B1O15528 508 aa22.04■■□□□ 1.12
HMGA1-205ENST00000447654 CBFA2T2O43439 604 aa22.04■■□□□ 1.12
HMGA1-205ENST00000447654 MYO1BO43795 1136 aa22.04■■□□□ 1.12
HMGA1-205ENST00000447654 HNRNPH1P31943 449 aaKnown RBP22.04■■□□□ 1.12
HMGA1-205ENST00000447654 TTLL5Q6EMB2 1281 aa22.04■■□□□ 1.12
HMGA1-205ENST00000447654 LARP1Q6PKG0 1096 aaKnown RBP22.04■■□□□ 1.12
HMGA1-205ENST00000447654 CCAR1Q8IX12 1150 aaKnown RBP22.04■■□□□ 1.12
HMGA1-205ENST00000447654 ENGASEQ8NFI3 743 aa22.04■■□□□ 1.12
HMGA1-205ENST00000447654 SLC52A2Q9HAB3 445 aa22.04■■□□□ 1.12
HMGA1-205ENST00000447654 ZNF790Q6PG37 636 aa22.03■■□□□ 1.12
HMGA1-205ENST00000447654 NECAB1Q8N987 351 aa22.03■■□□□ 1.12
HMGA1-205ENST00000447654 EPC1Q9H2F5 836 aa22.03■■□□□ 1.12
HMGA1-205ENST00000447654 SCN11AQ9UI33 1791 aa22.03■■□□□ 1.12
HMGA1-205ENST00000447654 TATP17735 454 aaPredicted RBP22.02■■□□□ 1.12
HMGA1-205ENST00000447654 DDR1Q08345 913 aa22.02■■□□□ 1.12
HMGA1-205ENST00000447654 CWF19L2Q2TBE0 894 aaKnown RBP22.02■■□□□ 1.12
HMGA1-205ENST00000447654 LRCH2Q5VUJ6 765 aa22.02■■□□□ 1.12
HMGA1-205ENST00000447654 SRGAP1Q7Z6B7 1085 aa22.02■■□□□ 1.12
HMGA1-205ENST00000447654 CEP112Q8N8E3 955 aa22.02■■□□□ 1.12
HMGA1-205ENST00000447654 ERCC4Q92889 916 aaPredicted RBP22.02■■□□□ 1.12
HMGA1-205ENST00000447654 VIPAS39Q9H9C1 493 aa22.02■■□□□ 1.12
HMGA1-205ENST00000447654 PATL2C9JE40 543 aaKnown RBP22.02■■□□□ 1.12
HMGA1-205ENST00000447654 CPA1P15085 419 aa22.02■■□□□ 1.12
HMGA1-205ENST00000447654 USP42Q9H9J4 1324 aaKnown RBP22.02■■□□□ 1.11
HMGA1-205ENST00000447654 MYH15Q9Y2K3 1946 aa22.01■■□□□ 1.11
HMGA1-205ENST00000447654 MCM6Q14566 821 aa22.01■■□□□ 1.11
HMGA1-205ENST00000447654 NECTIN1Q15223 517 aa22.01■■□□□ 1.11
HMGA1-205ENST00000447654 CTCFLQ8NI51 663 aaPredicted RBP22.01■■□□□ 1.11
HMGA1-205ENST00000447654 PPP2R2CQ9Y2T4 447 aa22.01■■□□□ 1.11
HMGA1-205ENST00000447654 ATXN2Q99700 1313 aaKnown RBP22.01■■□□□ 1.11
HMGA1-205ENST00000447654 IKBKBO14920 756 aa22.01■■□□□ 1.11
HMGA1-205ENST00000447654 ADCK5Q3MIX3 580 aa22.01■■□□□ 1.11
HMGA1-205ENST00000447654 KIFC2Q96AC6 838 aa22.01■■□□□ 1.11
HMGA1-205ENST00000447654 C5P01031 1676 aa22■■□□□ 1.11
HMGA1-205ENST00000447654 SURF6O75683 361 aaKnown RBP22■■□□□ 1.11
HMGA1-205ENST00000447654 ERCC3P19447 782 aa22■■□□□ 1.11
HMGA1-205ENST00000447654 CHMP4BP1P59074 171 aa22■■□□□ 1.11
HMGA1-205ENST00000447654 SAMD1Q6SPF0 538 aaPredicted RBP22■■□□□ 1.11
HMGA1-205ENST00000447654 ZNF335Q9H4Z2 1342 aaPredicted RBP22■■□□□ 1.11
HMGA1-205ENST00000447654 GNG11P61952 73 aa21.99■■□□□ 1.11
HMGA1-205ENST00000447654 AIMP1Q12904 312 aaKnown RBP21.99■■□□□ 1.11
HMGA1-205ENST00000447654 KSR2Q6VAB6 950 aa21.99■■□□□ 1.11
HMGA1-205ENST00000447654 NUTM1Q86Y26 1132 aa21.99■■□□□ 1.11
HMGA1-205ENST00000447654 GNL3LQ9NVN8 582 aaKnown RBP21.99■■□□□ 1.11
HMGA1-205ENST00000447654 HSP90B1P14625 803 aaKnown RBP21.99■■□□□ 1.11
HMGA1-205ENST00000447654 AARSP49588 968 aaKnown RBP eCLIP21.99■■□□□ 1.11
HMGA1-205ENST00000447654 ZNF496Q96IT1 587 aaPredicted RBP21.99■■□□□ 1.11
HMGA1-205ENST00000447654 TMCO5BA8MYB1 307 aa21.98■■□□□ 1.11
HMGA1-205ENST00000447654 SOCS7O14512 581 aa21.98■■□□□ 1.11
HMGA1-205ENST00000447654 PRPF40BQ6NWY9 871 aaKnown RBP21.98■■□□□ 1.11
HMGA1-205ENST00000447654 AFAP1L1Q8TED9 768 aa21.98■■□□□ 1.11
HMGA1-205ENST00000447654 ANKZF1Q9H8Y5 726 aa21.98■■□□□ 1.11
HMGA1-205ENST00000447654 SPG7Q9UQ90 795 aa21.98■■□□□ 1.11
HMGA1-205ENST00000447654 PIP4K2AP48426 406 aaPredicted RBP21.98■■□□□ 1.11
HMGA1-205ENST00000447654 GBP6Q6ZN66 633 aa21.98■■□□□ 1.11
HMGA1-205ENST00000447654 IFNL2Q8IZJ0 200 aa21.98■■□□□ 1.11
HMGA1-205ENST00000447654 KAT2BQ92831 832 aa21.98■■□□□ 1.11
HMGA1-205ENST00000447654 BICC1Q9H694 974 aaKnown RBP21.98■■□□□ 1.11
HMGA1-205ENST00000447654 CPDO75976 1380 aa21.97■■□□□ 1.11
HMGA1-205ENST00000447654 SHOX2O60902 331 aaPredicted RBP21.97■■□□□ 1.11
HMGA1-205ENST00000447654 CASP8Q14790 479 aa21.97■■□□□ 1.11
HMGA1-205ENST00000447654 C11orf91Q3C1V1 193 aa21.97■■□□□ 1.11
HMGA1-205ENST00000447654 GIMAP7Q8NHV1 300 aa21.97■■□□□ 1.11
HMGA1-205ENST00000447654 DDX21Q9NR30 783 aaKnown RBP eCLIP21.97■■□□□ 1.11
HMGA1-205ENST00000447654 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.97■■□□□ 1.11
HMGA1-205ENST00000447654 CUTAO60888 179 aa21.97■■□□□ 1.11
HMGA1-205ENST00000447654 MAP2K1Q02750 393 aaPredicted RBP21.97■■□□□ 1.11
HMGA1-205ENST00000447654 NEDD9Q14511 834 aa21.97■■□□□ 1.11
HMGA1-205ENST00000447654 CWC27Q6UX04 472 aaKnown RBP21.97■■□□□ 1.11
HMGA1-205ENST00000447654 RHPN1Q8TCX5 695 aa21.97■■□□□ 1.11
HMGA1-205ENST00000447654 FAM204AQ9H8W3 233 aa21.97■■□□□ 1.11
HMGA1-205ENST00000447654 EXOC5O00471 708 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms