RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 MYH13Q9UKX3 1938 aa17.41■□□□□ 0.38
SREBF1-207ENST00000447641 MKI67P46013 3256 aaKnown RBP17.41■□□□□ 0.38
SREBF1-207ENST00000447641 CDC37L1Q7L3B6 337 aa17.4■□□□□ 0.38
SREBF1-207ENST00000447641 RHPN1Q8TCX5 695 aa17.4■□□□□ 0.38
SREBF1-207ENST00000447641 FBXW7Q969H0 707 aa17.4■□□□□ 0.38
SREBF1-207ENST00000447641 NEUROD6Q96NK8 337 aa17.4■□□□□ 0.38
SREBF1-207ENST00000447641 DCTPP1Q9H773 170 aa17.4■□□□□ 0.38
SREBF1-207ENST00000447641 GNL3LQ9NVN8 582 aaKnown RBP17.4■□□□□ 0.38
SREBF1-207ENST00000447641 COL1A1P02452 1464 aaPredicted RBP17.39■□□□□ 0.37
SREBF1-207ENST00000447641 MFSD14BQ5SR56 506 aa17.39■□□□□ 0.37
SREBF1-207ENST00000447641 TBC1D22AQ8WUA7 517 aa17.39■□□□□ 0.37
SREBF1-207ENST00000447641 EAF2Q96CJ1 260 aaPredicted RBP17.39■□□□□ 0.37
SREBF1-207ENST00000447641 ZBED3Q96IU2 234 aaPredicted RBP17.39■□□□□ 0.37
SREBF1-207ENST00000447641 JAG2Q9Y219 1238 aa17.39■□□□□ 0.37
SREBF1-207ENST00000447641 PDS5AQ29RF7 1337 aaKnown RBP17.39■□□□□ 0.37
SREBF1-207ENST00000447641 HUNKP57058 714 aa17.38■□□□□ 0.37
SREBF1-207ENST00000447641 NOGQ13253 232 aa17.38■□□□□ 0.37
SREBF1-207ENST00000447641 TBC1D10BQ4KMP7 808 aaPredicted RBP17.38■□□□□ 0.37
SREBF1-207ENST00000447641 USP48Q86UV5 1035 aa17.38■□□□□ 0.37
SREBF1-207ENST00000447641 KIAA0825Q8IV33 1275 aa17.38■□□□□ 0.37
SREBF1-207ENST00000447641 OGFOD1Q8N543 542 aa17.38■□□□□ 0.37
SREBF1-207ENST00000447641 KIF1BPQ96EK5 621 aa17.38■□□□□ 0.37
SREBF1-207ENST00000447641 MYOZ2Q9NPC6 264 aa17.38■□□□□ 0.37
SREBF1-207ENST00000447641 CENPFP49454 3210 aa17.38■□□□□ 0.37
SREBF1-207ENST00000447641 BRCA2P51587 3418 aa17.37■□□□□ 0.37
SREBF1-207ENST00000447641 ADM5C9JUS6 153 aa17.37■□□□□ 0.37
SREBF1-207ENST00000447641 FRAT2O75474 233 aaPredicted RBP17.37■□□□□ 0.37
SREBF1-207ENST00000447641 ARID4AP29374 1257 aaPredicted RBP17.37■□□□□ 0.37
SREBF1-207ENST00000447641 RASGRF1Q13972 1273 aa17.37■□□□□ 0.37
SREBF1-207ENST00000447641 GRIK5Q16478 980 aa17.37■□□□□ 0.37
SREBF1-207ENST00000447641 KIF4BQ2VIQ3 1234 aa17.37■□□□□ 0.37
SREBF1-207ENST00000447641 MTMR14Q8NCE2 650 aa17.37■□□□□ 0.37
SREBF1-207ENST00000447641 EXOC6Q8TAG9 804 aa17.37■□□□□ 0.37
SREBF1-207ENST00000447641 WDR66Q8TBY9 1149 aa17.37■□□□□ 0.37
SREBF1-207ENST00000447641 ZNF512BQ96KM6 892 aaPredicted RBP17.37■□□□□ 0.37
SREBF1-207ENST00000447641 DBNDD2Q9BQY9 259 aa17.37■□□□□ 0.37
SREBF1-207ENST00000447641 DBNLQ9UJU6 430 aaKnown RBP17.37■□□□□ 0.37
SREBF1-207ENST00000447641 DENND2AQ9ULE3 1009 aa17.37■□□□□ 0.37
SREBF1-207ENST00000447641 SUGT1Q9Y2Z0 365 aa17.37■□□□□ 0.37
SREBF1-207ENST00000447641 SALL1Q9NSC2 1324 aa17.37■□□□□ 0.37
SREBF1-207ENST00000447641 CHAF1AQ13111 956 aaPredicted RBP17.36■□□□□ 0.37
SREBF1-207ENST00000447641 MRIQ9BWK5 157 aa17.36■□□□□ 0.37
SREBF1-207ENST00000447641 HDAC1Q13547 482 aaPredicted RBP17.35■□□□□ 0.37
SREBF1-207ENST00000447641 GORABQ5T7V8 394 aa17.35■□□□□ 0.37
SREBF1-207ENST00000447641 RBM26Q5T8P6 1007 aaKnown RBP17.35■□□□□ 0.37
SREBF1-207ENST00000447641 CCDC8Q9H0W5 538 aaPredicted RBP17.35■□□□□ 0.37
SREBF1-207ENST00000447641 IL1RAPL2Q9NP60 686 aa17.35■□□□□ 0.37
SREBF1-207ENST00000447641 TLR7Q9NYK1 1049 aaKnown RBP17.35■□□□□ 0.37
SREBF1-207ENST00000447641 HDAC9Q9UKV0 1011 aa17.35■□□□□ 0.37
SREBF1-207ENST00000447641 ASTN2O75129 1339 aaPredicted RBP17.35■□□□□ 0.37
SREBF1-207ENST00000447641 WNT10BO00744 389 aa17.34■□□□□ 0.37
SREBF1-207ENST00000447641 UQCRFS1P1P0C7P4 283 aa17.34■□□□□ 0.37
SREBF1-207ENST00000447641 HDLBPQ00341 1268 aaKnown RBP17.34■□□□□ 0.37
SREBF1-207ENST00000447641 SCARF1Q14162 830 aa17.34■□□□□ 0.37
SREBF1-207ENST00000447641 RGMBQ6NW40 437 aa17.34■□□□□ 0.37
SREBF1-207ENST00000447641 AACSQ86V21 672 aa17.34■□□□□ 0.37
SREBF1-207ENST00000447641 CLASRPQ8N2M8 674 aaKnown RBP17.34■□□□□ 0.37
SREBF1-207ENST00000447641 GBA2Q9HCG7 927 aaPredicted RBP17.34■□□□□ 0.37
SREBF1-207ENST00000447641 HMG20BQ9P0W2 317 aa17.34■□□□□ 0.37
SREBF1-207ENST00000447641 SERPINA10Q9UK55 444 aa17.34■□□□□ 0.37
SREBF1-207ENST00000447641 PAPPA2Q9BXP8 1791 aa17.33■□□□□ 0.37
SREBF1-207ENST00000447641 APBB1O00213 710 aa17.33■□□□□ 0.36
SREBF1-207ENST00000447641 MCAMP43121 646 aa17.33■□□□□ 0.36
SREBF1-207ENST00000447641 NBPF9Q3BBW0 867 aa17.33■□□□□ 0.36
SREBF1-207ENST00000447641 KRT26Q7Z3Y9 468 aa17.33■□□□□ 0.36
SREBF1-207ENST00000447641 LRRCC1Q9C099 1032 aa17.33■□□□□ 0.36
SREBF1-207ENST00000447641 TTF2Q9UNY4 1162 aaKnown RBP17.33■□□□□ 0.36
SREBF1-207ENST00000447641 PITPNM2Q9BZ72 1349 aa17.32■□□□□ 0.36
SREBF1-207ENST00000447641 F8W031 263 aaPredicted RBP17.32■□□□□ 0.36
SREBF1-207ENST00000447641 SOX10P56693 466 aa17.32■□□□□ 0.36
SREBF1-207ENST00000447641 KIF23Q02241 960 aaPredicted RBP17.32■□□□□ 0.36
SREBF1-207ENST00000447641 CCDC158Q5M9N0 1113 aa17.32■□□□□ 0.36
SREBF1-207ENST00000447641 SPATA5Q8NB90 893 aa17.32■□□□□ 0.36
SREBF1-207ENST00000447641 SAGE1Q9NXZ1 904 aa17.32■□□□□ 0.36
SREBF1-207ENST00000447641 ECM29Q5VYK3 1845 aa17.32■□□□□ 0.36
SREBF1-207ENST00000447641 SPDYE2BA6NHP3 402 aa17.31■□□□□ 0.36
SREBF1-207ENST00000447641 SLC10A3P09131 477 aa17.31■□□□□ 0.36
SREBF1-207ENST00000447641 SPDYE6P0CI01 402 aa17.31■□□□□ 0.36
SREBF1-207ENST00000447641 DLGAP5Q15398 846 aa17.31■□□□□ 0.36
SREBF1-207ENST00000447641 CFAP100Q494V2 611 aa17.31■□□□□ 0.36
SREBF1-207ENST00000447641 PI16Q6UXB8 463 aa17.31■□□□□ 0.36
SREBF1-207ENST00000447641 PRMT6Q96LA8 375 aaPredicted RBP17.31■□□□□ 0.36
SREBF1-207ENST00000447641 RNF186Q9NXI6 227 aa17.31■□□□□ 0.36
SREBF1-207ENST00000447641 PCDHAC2Q9Y5I4 1007 aa17.31■□□□□ 0.36
SREBF1-207ENST00000447641 PRDX5P30044 214 aa17.3■□□□□ 0.36
SREBF1-207ENST00000447641 CRKP46108 304 aa17.3■□□□□ 0.36
SREBF1-207ENST00000447641 TTC39AQ5SRH9 613 aa17.3■□□□□ 0.36
SREBF1-207ENST00000447641 HHIPL2Q6UWX4 724 aa17.3■□□□□ 0.36
SREBF1-207ENST00000447641 ZGPATQ8N5A5 531 aaKnown RBP17.3■□□□□ 0.36
SREBF1-207ENST00000447641 GGA3Q9NZ52 723 aa17.3■□□□□ 0.36
SREBF1-207ENST00000447641 MAST3O60307 1309 aa17.29■□□□□ 0.36
SREBF1-207ENST00000447641 AOX1Q06278 1338 aa17.29■□□□□ 0.36
SREBF1-207ENST00000447641 SMARCA5O60264 1052 aaPredicted RBP17.29■□□□□ 0.36
SREBF1-207ENST00000447641 LDHBP07195 334 aaKnown RBP17.29■□□□□ 0.36
SREBF1-207ENST00000447641 ANGEL2Q5VTE6 544 aaKnown RBP17.29■□□□□ 0.36
SREBF1-207ENST00000447641 DCPSQ96C86 337 aaKnown RBP17.29■□□□□ 0.36
SREBF1-207ENST00000447641 ZDHHC15Q96MV8 337 aa17.29■□□□□ 0.36
SREBF1-207ENST00000447641 PCDH10Q9P2E7 1040 aa17.29■□□□□ 0.36
SREBF1-207ENST00000447641 TRPA1O75762 1119 aa17.28■□□□□ 0.36
SREBF1-207ENST00000447641 IFIT2P09913 472 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms