RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 PRDX5P30044 214 aa14.63□□□□□ -0.07
RFC4-208ENST00000447345 MCAMP43121 646 aa14.63□□□□□ -0.07
RFC4-208ENST00000447345 CRKP46108 304 aa14.63□□□□□ -0.07
RFC4-208ENST00000447345 CCDC158Q5M9N0 1113 aa14.63□□□□□ -0.07
RFC4-208ENST00000447345 CDC37L1Q7L3B6 337 aa14.63□□□□□ -0.07
RFC4-208ENST00000447345 SULF1Q8IWU6 871 aa14.63□□□□□ -0.07
RFC4-208ENST00000447345 SNRKQ9NRH2 765 aa14.63□□□□□ -0.07
RFC4-208ENST00000447345 HMG20BQ9P0W2 317 aa14.63□□□□□ -0.07
RFC4-208ENST00000447345 ABCF2Q9UG63 623 aa14.63□□□□□ -0.07
RFC4-208ENST00000447345 CEP350Q5VT06 3117 aa14.62□□□□□ -0.07
RFC4-208ENST00000447345 SPDYE2BA6NHP3 402 aa14.62□□□□□ -0.07
RFC4-208ENST00000447345 RAB11FIP3O75154 756 aa14.62□□□□□ -0.07
RFC4-208ENST00000447345 LDHBP07195 334 aaKnown RBP14.62□□□□□ -0.07
RFC4-208ENST00000447345 SPDYE6P0CI01 402 aa14.62□□□□□ -0.07
RFC4-208ENST00000447345 CLASRPQ8N2M8 674 aaKnown RBP14.62□□□□□ -0.07
RFC4-208ENST00000447345 SPATA5Q8NB90 893 aa14.62□□□□□ -0.07
RFC4-208ENST00000447345 PRMT6Q96LA8 375 aaPredicted RBP14.62□□□□□ -0.07
RFC4-208ENST00000447345 CDK5RAP2Q96SN8 1893 aa14.62□□□□□ -0.07
RFC4-208ENST00000447345 VEZTQ9HBM0 779 aa14.62□□□□□ -0.07
RFC4-208ENST00000447345 SERPINA10Q9UK55 444 aa14.62□□□□□ -0.07
RFC4-208ENST00000447345 MAST3O60307 1309 aa14.62□□□□□ -0.07
RFC4-208ENST00000447345 CELF2O95319 508 aaKnown RBP14.61□□□□□ -0.07
RFC4-208ENST00000447345 UQCRFS1P1P0C7P4 283 aa14.61□□□□□ -0.07
RFC4-208ENST00000447345 MMP14P50281 582 aa14.61□□□□□ -0.07
RFC4-208ENST00000447345 DIXDC1Q155Q3 683 aa14.61□□□□□ -0.07
RFC4-208ENST00000447345 TBC1D9Q6ZT07 1266 aa14.61□□□□□ -0.07
RFC4-208ENST00000447345 TEKT1Q969V4 418 aa14.61□□□□□ -0.07
RFC4-208ENST00000447345 ZBED3Q96IU2 234 aaPredicted RBP14.61□□□□□ -0.07
RFC4-208ENST00000447345 LRRCC1Q9C099 1032 aa14.61□□□□□ -0.07
RFC4-208ENST00000447345 PDS5AQ29RF7 1337 aaKnown RBP14.61□□□□□ -0.07
RFC4-208ENST00000447345 PITPNM2Q9BZ72 1349 aa14.61□□□□□ -0.07
RFC4-208ENST00000447345 SALL1Q9NSC2 1324 aa14.61□□□□□ -0.07
RFC4-208ENST00000447345 TMEM88BA6NKF7 163 aa14.6□□□□□ -0.07
RFC4-208ENST00000447345 MYO1BO43795 1136 aa14.6□□□□□ -0.07
RFC4-208ENST00000447345 IFIT2P09913 472 aaKnown RBP14.6□□□□□ -0.07
RFC4-208ENST00000447345 PRAMEF18Q5VWM3 479 aa14.6□□□□□ -0.07
RFC4-208ENST00000447345 DZIP1Q86YF9 867 aaKnown RBP14.6□□□□□ -0.07
RFC4-208ENST00000447345 ZGPATQ8N5A5 531 aaKnown RBP14.6□□□□□ -0.07
RFC4-208ENST00000447345 MTMR14Q8NCE2 650 aa14.6□□□□□ -0.07
RFC4-208ENST00000447345 CDCA5Q96FF9 252 aa14.6□□□□□ -0.07
RFC4-208ENST00000447345 TDRD3Q9H7E2 651 aaKnown RBP14.6□□□□□ -0.07
RFC4-208ENST00000447345 ABT1Q9ULW3 272 aaKnown RBP14.6□□□□□ -0.07
RFC4-208ENST00000447345 SUGT1Q9Y2Z0 365 aa14.6□□□□□ -0.07
RFC4-208ENST00000447345 NDUFB9Q9Y6M9 179 aa14.6□□□□□ -0.07
RFC4-208ENST00000447345 APOBEC3FQ8IUX4 373 aaKnown RBP14.59□□□□□ -0.07
RFC4-208ENST00000447345 DCTPP1Q9H773 170 aa14.59□□□□□ -0.07
RFC4-208ENST00000447345 CREBZFQ9NS37 354 aa14.59□□□□□ -0.07
RFC4-208ENST00000447345 OTOFQ9HC10 1997 aa14.59□□□□□ -0.07
RFC4-208ENST00000447345 PAPPA2Q9BXP8 1791 aa14.59□□□□□ -0.07
RFC4-208ENST00000447345 FOCADQ5VW36 1801 aa14.58□□□□□ -0.08
RFC4-208ENST00000447345 ZAP70P43403 619 aa14.58□□□□□ -0.08
RFC4-208ENST00000447345 CACNB3P54284 484 aa14.58□□□□□ -0.08
RFC4-208ENST00000447345 CST9Q5W186 159 aa14.58□□□□□ -0.08
RFC4-208ENST00000447345 ERICH6Q7L0X2 663 aa14.58□□□□□ -0.08
RFC4-208ENST00000447345 RAI14Q9P0K7 980 aa14.58□□□□□ -0.08
RFC4-208ENST00000447345 MKRN1Q9UHC7 482 aaKnown RBP14.58□□□□□ -0.08
RFC4-208ENST00000447345 ZBTB22O15209 634 aa14.57□□□□□ -0.08
RFC4-208ENST00000447345 HDLBPQ00341 1268 aaKnown RBP14.57□□□□□ -0.08
RFC4-208ENST00000447345 MECOMQ03112 1051 aa14.57□□□□□ -0.08
RFC4-208ENST00000447345 SPDYE2Q495Y8 402 aa14.57□□□□□ -0.08
RFC4-208ENST00000447345 SPTY2D1Q68D10 685 aaPredicted RBP14.57□□□□□ -0.08
RFC4-208ENST00000447345 PAXIP1Q6ZW49 1069 aaPredicted RBP14.57□□□□□ -0.08
RFC4-208ENST00000447345 ZDHHC15Q96MV8 337 aa14.57□□□□□ -0.08
RFC4-208ENST00000447345 LRP2BPQ9P2M1 347 aa14.57□□□□□ -0.08
RFC4-208ENST00000447345 ZNF70Q9UC06 446 aaPredicted RBP14.57□□□□□ -0.08
RFC4-208ENST00000447345 DAGLAQ9Y4D2 1042 aa14.57□□□□□ -0.08
RFC4-208ENST00000447345 TCP10L2B9ZVM9 353 aa14.56□□□□□ -0.08
RFC4-208ENST00000447345 CYP2E1P05181 493 aaPredicted RBP14.56□□□□□ -0.08
RFC4-208ENST00000447345 HHIPL2Q6UWX4 724 aa14.56□□□□□ -0.08
RFC4-208ENST00000447345 ZNF512BQ96KM6 892 aaPredicted RBP14.56□□□□□ -0.08
RFC4-208ENST00000447345 DNAJC2Q99543 621 aaKnown RBP14.56□□□□□ -0.08
RFC4-208ENST00000447345 GRM1Q13255 1194 aa14.55□□□□□ -0.08
RFC4-208ENST00000447345 AAMPQ13685 434 aa14.55□□□□□ -0.08
RFC4-208ENST00000447345 APOBEC3HQ6NTF7 200 aaKnown RBP14.55□□□□□ -0.08
RFC4-208ENST00000447345 DEFB129Q9H1M3 183 aa14.55□□□□□ -0.08
RFC4-208ENST00000447345 PIH1D3Q9NQM4 214 aaKnown RBP14.55□□□□□ -0.08
RFC4-208ENST00000447345 TMOD2Q9NZR1 351 aa14.55□□□□□ -0.08
RFC4-208ENST00000447345 MROH7-TTC4A0A0A0MT08 1334 aa14.55□□□□□ -0.08
RFC4-208ENST00000447345 SSC5DA1L4H1 1573 aa14.55□□□□□ -0.08
RFC4-208ENST00000447345 IDH1O75874 414 aaKnown RBP14.54□□□□□ -0.08
RFC4-208ENST00000447345 HDAC1Q13547 482 aaPredicted RBP14.54□□□□□ -0.08
RFC4-208ENST00000447345 PRKG1Q13976 671 aa14.54□□□□□ -0.08
RFC4-208ENST00000447345 TTLL12Q14166 644 aaPredicted RBP14.54□□□□□ -0.08
RFC4-208ENST00000447345 TSHZ3Q63HK5 1081 aa14.54□□□□□ -0.08
RFC4-208ENST00000447345 ZNF384Q8TF68 577 aa14.54□□□□□ -0.08
RFC4-208ENST00000447345 NSUN4Q96CB9 384 aaKnown RBP14.54□□□□□ -0.08
RFC4-208ENST00000447345 ANTXR1Q9H6X2 564 aa14.54□□□□□ -0.08
RFC4-208ENST00000447345 GBA2Q9HCG7 927 aaPredicted RBP14.54□□□□□ -0.08
RFC4-208ENST00000447345 NAV1Q8NEY1 1877 aa14.53□□□□□ -0.08
RFC4-208ENST00000447345 CNTNAP1P78357 1384 aa14.53□□□□□ -0.08
RFC4-208ENST00000447345 GAKO14976 1311 aa14.53□□□□□ -0.08
RFC4-208ENST00000447345 BTDP43251 543 aa14.53□□□□□ -0.08
RFC4-208ENST00000447345 TNFAIP1Q13829 316 aa14.53□□□□□ -0.08
RFC4-208ENST00000447345 RASA3Q14644 834 aa14.53□□□□□ -0.08
RFC4-208ENST00000447345 CDC42EP5Q6NZY7 148 aa14.53□□□□□ -0.08
RFC4-208ENST00000447345 MOB2Q70IA6 237 aa14.53□□□□□ -0.08
RFC4-208ENST00000447345 CDAN1Q8IWY9 1227 aa14.53□□□□□ -0.08
RFC4-208ENST00000447345 SLF2Q8IX21 1173 aa14.53□□□□□ -0.08
RFC4-208ENST00000447345 EDC3Q96F86 508 aaKnown RBP14.53□□□□□ -0.08
RFC4-208ENST00000447345 TMEM39BQ9GZU3 492 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms